RNA–Protein interactions for RNA: ENST00000527148.5

SLC39A4-204, Transcript of solute carrier family 39 member 4, humanhuman

TSL 2

Gene SLC39A4, Length 684 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-204ENST00000527148 NISCHQ9Y2I1 1504 aa51.12■■■■■ 5.77
SLC39A4-204ENST00000527148 CCDC180Q9P1Z9 1646 aa45.56■■■■■ 4.88
SLC39A4-204ENST00000527148 ABCC9O60706 1549 aa44.45■■■■■ 4.71
SLC39A4-204ENST00000527148 RB1CC1Q8TDY2 1594 aa42.85■■■■■ 4.45
SLC39A4-204ENST00000527148 NACADO15069 1562 aa42.8■■■■■ 4.44
SLC39A4-204ENST00000527148 ZCCHC6Q5VYS8 1495 aaKnown RBP42.62■■■■■ 4.41
SLC39A4-204ENST00000527148 MYO15BQ96JP2 1530 aa42.58■■■■■ 4.41
SLC39A4-204ENST00000527148 DCAF8L2P0C7V8 631 aa42.48■■■■■ 4.39
SLC39A4-204ENST00000527148 DCAF1Q9Y4B6 1507 aa42.37■■■■■ 4.37
SLC39A4-204ENST00000527148 UNC13AQ9UPW8 1703 aa41.89■■■■■ 4.3
SLC39A4-204ENST00000527148 BICRAQ9NZM4 1560 aa41.54■■■■■ 4.24
SLC39A4-204ENST00000527148 SCRIBQ14160 1630 aa41.44■■■■■ 4.22
SLC39A4-204ENST00000527148 PABPN1Q86U42 306 aaKnown RBP eCLIP41.44■■■■■ 4.22
SLC39A4-204ENST00000527148 SHROOM4Q9ULL8 1493 aa41.2■■■■■ 4.19
SLC39A4-204ENST00000527148 DNAJC5BQ9UF47 199 aa40.84■■■■■ 4.13
SLC39A4-204ENST00000527148 EIF4G1Q04637 1599 aaKnown RBP40.45■■■■■ 4.07
SLC39A4-204ENST00000527148 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
SLC39A4-204ENST00000527148 CECR2Q9BXF3 1484 aa39.98■■■■□ 3.99
SLC39A4-204ENST00000527148 SMARCA4P51532 1647 aa39.69■■■■□ 3.94
SLC39A4-204ENST00000527148 BAZ1AQ9NRL2 1556 aaPredicted RBP39.65■■■■□ 3.94
SLC39A4-204ENST00000527148 NCAPD3P42695 1498 aa39.46■■■■□ 3.91
SLC39A4-204ENST00000527148 ATAD2BQ9ULI0 1458 aa39.46■■■■□ 3.91
SLC39A4-204ENST00000527148 SMARCA2P51531 1590 aa39.44■■■■□ 3.9
SLC39A4-204ENST00000527148 MROH2BQ7Z745 1585 aa39.37■■■■□ 3.89
SLC39A4-204ENST00000527148 PEG3Q9GZU2 1588 aa39.36■■■■□ 3.89
SLC39A4-204ENST00000527148 HMGXB3Q12766 1538 aa39.32■■■■□ 3.89
SLC39A4-204ENST00000527148 BAZ1BQ9UIG0 1483 aaKnown RBP39.12■■■■□ 3.85
SLC39A4-204ENST00000527148 WIZO95785 1651 aa38.94■■■■□ 3.82
SLC39A4-204ENST00000527148 RSF1Q96T23 1441 aaPredicted RBP38.89■■■■□ 3.82
SLC39A4-204ENST00000527148 TOP2AP11388 1531 aaKnown RBP38.58■■■■□ 3.77
SLC39A4-204ENST00000527148 NESP48681 1621 aa38.46■■■■□ 3.75
SLC39A4-204ENST00000527148 LAMC3Q9Y6N6 1575 aa38.46■■■■□ 3.75
SLC39A4-204ENST00000527148 ERCC6Q03468 1493 aa38.33■■■■□ 3.73
SLC39A4-204ENST00000527148 CADPSQ9ULU8 1353 aa38.26■■■■□ 3.72
SLC39A4-204ENST00000527148 PDS5BQ9NTI5 1447 aa38.13■■■■□ 3.7
SLC39A4-204ENST00000527148 KIF21AQ7Z4S6 1674 aa38.07■■■■□ 3.69
SLC39A4-204ENST00000527148 CFTRP13569 1480 aa38.07■■■■□ 3.68
SLC39A4-204ENST00000527148 CCDC88BA6NC98 1476 aa38.04■■■■□ 3.68
SLC39A4-204ENST00000527148 CUX2O14529 1486 aa38.03■■■■□ 3.68
SLC39A4-204ENST00000527148 THOC2Q8NI27 1593 aaKnown RBP38■■■■□ 3.67
SLC39A4-204ENST00000527148 PRDM2Q13029 1718 aa37.87■■■■□ 3.65
SLC39A4-204ENST00000527148 FANCD2Q9BXW9 1451 aa37.84■■■■□ 3.65
SLC39A4-204ENST00000527148 CEP164Q9UPV0 1460 aa37.82■■■■□ 3.64
SLC39A4-204ENST00000527148 MRC2Q9UBG0 1479 aa37.77■■■■□ 3.64
SLC39A4-204ENST00000527148 SUPT5HO00267 1087 aaKnown RBP37.71■■■■□ 3.63
SLC39A4-204ENST00000527148 WDR62O43379 1518 aa37.69■■■■□ 3.62
SLC39A4-204ENST00000527148 URB2Q14146 1524 aaKnown RBP37.46■■■■□ 3.59
SLC39A4-204ENST00000527148 ABCC8Q09428 1581 aa37.27■■■■□ 3.56
SLC39A4-204ENST00000527148 DNAJC5Q9H3Z4 198 aa37.27■■■■□ 3.56
SLC39A4-204ENST00000527148 TOPBP1Q92547 1522 aa37.25■■■■□ 3.55
SLC39A4-204ENST00000527148 DNMBPQ6XZF7 1577 aa37.23■■■■□ 3.55
SLC39A4-204ENST00000527148 IFT140Q96RY7 1462 aa37.02■■■■□ 3.52
SLC39A4-204ENST00000527148 CUX1P39880 1505 aa36.94■■■■□ 3.5
SLC39A4-204ENST00000527148 POLA1P09884 1462 aaPredicted RBP36.93■■■■□ 3.5
SLC39A4-204ENST00000527148 TARBP1Q13395 1621 aaKnown RBP36.88■■■■□ 3.49
SLC39A4-204ENST00000527148 FGD5Q6ZNL6 1462 aa36.82■■■■□ 3.49
SLC39A4-204ENST00000527148 ZNF608Q9ULD9 1512 aaPredicted RBP36.82■■■■□ 3.48
SLC39A4-204ENST00000527148 EIF4G3O43432 1585 aaKnown RBP36.75■■■■□ 3.47
SLC39A4-204ENST00000527148 SOGA1O94964 1423 aa36.72■■■■□ 3.47
SLC39A4-204ENST00000527148 RAD54L2Q9Y4B4 1467 aa36.7■■■■□ 3.47
SLC39A4-204ENST00000527148 BIVM-ERCC5R4GMW8 1640 aa36.68■■■■□ 3.46
SLC39A4-204ENST00000527148 WRNQ14191 1432 aaPredicted RBP eCLIP36.68■■■■□ 3.46
SLC39A4-204ENST00000527148 WDR97A6NE52 1622 aa36.66■■■■□ 3.46
SLC39A4-204ENST00000527148 TOP2BQ02880 1626 aa36.65■■■■□ 3.46
SLC39A4-204ENST00000527148 SYNJ1O43426 1573 aa36.61■■■■□ 3.45
SLC39A4-204ENST00000527148 AQRO60306 1485 aaKnown RBP eCLIP36.57■■■■□ 3.452e-8■■■■■ 28.7
SLC39A4-204ENST00000527148 TDRD9Q8NDG6 1382 aaKnown RBP36.49■■■■□ 3.43
SLC39A4-204ENST00000527148 ABCA10Q8WWZ4 1543 aa36.49■■■■□ 3.43
SLC39A4-204ENST00000527148 ABCA5Q8WWZ7 1642 aa36.39■■■■□ 3.42
SLC39A4-204ENST00000527148 GRIN2BQ13224 1484 aa36.35■■■■□ 3.41
SLC39A4-204ENST00000527148 PBRM1Q86U86 1689 aa36.32■■■■□ 3.41
SLC39A4-204ENST00000527148 GAPVD1Q14C86 1478 aa36.32■■■■□ 3.41
SLC39A4-204ENST00000527148 OSCARQ8IYS5 282 aa36.3■■■■□ 3.4
SLC39A4-204ENST00000527148 SNAPC4Q5SXM2 1469 aa36.29■■■■□ 3.4
SLC39A4-204ENST00000527148 MAGI1Q96QZ7 1491 aaPredicted RBP36.28■■■■□ 3.4
SLC39A4-204ENST00000527148 CHD1O14646 1710 aa36.28■■■■□ 3.4
SLC39A4-204ENST00000527148 SYNJ2O15056 1496 aa36.12■■■■□ 3.37
SLC39A4-204ENST00000527148 ERICH3Q5RHP9 1530 aa36.07■■■■□ 3.36
SLC39A4-204ENST00000527148 FBLN2P98095 1184 aa36.05■■■■□ 3.36
SLC39A4-204ENST00000527148 ADAMTS12P58397 1594 aa36.03■■■■□ 3.36
SLC39A4-204ENST00000527148 CHMP7Q8WUX9 453 aaPredicted RBP35.99■■■■□ 3.35
SLC39A4-204ENST00000527148 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
SLC39A4-204ENST00000527148 CLASP1Q7Z460 1538 aa35.91■■■■□ 3.34
SLC39A4-204ENST00000527148 KIF27Q86VH2 1401 aa35.91■■■■□ 3.34
SLC39A4-204ENST00000527148 GRIN2AQ12879 1464 aa35.89■■■■□ 3.34
SLC39A4-204ENST00000527148 RIMBP3CA6NJZ7 1639 aa35.83■■■■□ 3.33
SLC39A4-204ENST00000527148 RIMBP3BA6NNM3 1639 aa35.83■■■■□ 3.33
SLC39A4-204ENST00000527148 RIMBP3Q9UFD9 1639 aa35.83■■■■□ 3.33
SLC39A4-204ENST00000527148 ARHGEF11O15085 1522 aa35.83■■■■□ 3.33
SLC39A4-204ENST00000527148 CUL7Q14999 1698 aa35.75■■■■□ 3.31
SLC39A4-204ENST00000527148 NUP160Q12769 1436 aa35.74■■■■□ 3.31
SLC39A4-204ENST00000527148 IGF1RP08069 1367 aa35.73■■■■□ 3.31
SLC39A4-204ENST00000527148 CEP170Q5SW79 1584 aa35.72■■■■□ 3.31
SLC39A4-204ENST00000527148 TRIM41Q8WV44 630 aa35.66■■■■□ 3.3
SLC39A4-204ENST00000527148 ARAP1Q96P48 1450 aa35.53■■■■□ 3.28
SLC39A4-204ENST00000527148 RUSC2Q8N2Y8 1516 aa35.52■■■■□ 3.28
SLC39A4-204ENST00000527148 SHROOM2Q13796 1616 aa35.52■■■■□ 3.28
SLC39A4-204ENST00000527148 CARMIL1Q5VZK9 1371 aa35.51■■■■□ 3.28
SLC39A4-204ENST00000527148 KIAA0586Q9BVV6 1533 aa35.37■■■■□ 3.25
SLC39A4-204ENST00000527148 CYB5RLQ6IPT4 315 aa35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms