RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 DIP2BQ9P265 1576 aa19.66■□□□□ 0.74
CTSB-212ENST00000526645 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
CTSB-212ENST00000526645 KDM6BO15054 1643 aa19.62■□□□□ 0.73
CTSB-212ENST00000526645 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
CTSB-212ENST00000526645 FAM69CQ0P6D2 419 aa19.62■□□□□ 0.73
CTSB-212ENST00000526645 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
CTSB-212ENST00000526645 ADCY10Q96PN6 1610 aa19.58■□□□□ 0.73
CTSB-212ENST00000526645 KDM4FA0A1W2PPD8 638 aa19.51■□□□□ 0.71
CTSB-212ENST00000526645 KIAA0586Q9BVV6 1533 aa19.47■□□□□ 0.71
CTSB-212ENST00000526645 TSPOAP1O95153 1857 aa19.45■□□□□ 0.7
CTSB-212ENST00000526645 CUL7Q14999 1698 aa19.42■□□□□ 0.7
CTSB-212ENST00000526645 ILDR1Q86SU0 546 aaPredicted RBP19.39■□□□□ 0.69
CTSB-212ENST00000526645 SUPT5HO00267 1087 aaKnown RBP19.37■□□□□ 0.69
CTSB-212ENST00000526645 GLI2P10070 1586 aa19.36■□□□□ 0.69
CTSB-212ENST00000526645 ABCC2Q92887 1545 aa19.35■□□□□ 0.69
CTSB-212ENST00000526645 PLB1Q6P1J6 1458 aa19.34■□□□□ 0.69
CTSB-212ENST00000526645 PTPRGP23470 1445 aa19.34■□□□□ 0.69
CTSB-212ENST00000526645 ADGRL1O94910 1474 aa19.33■□□□□ 0.68
CTSB-212ENST00000526645 PPRC1Q5VV67 1664 aaKnown RBP19.33■□□□□ 0.68
CTSB-212ENST00000526645 CARMIL2Q6F5E8 1435 aa19.31■□□□□ 0.68
CTSB-212ENST00000526645 KIF27Q86VH2 1401 aa19.31■□□□□ 0.68
CTSB-212ENST00000526645 ASXL2Q76L83 1435 aa19.29■□□□□ 0.68
CTSB-212ENST00000526645 IGF1RP08069 1367 aa19.29■□□□□ 0.68
CTSB-212ENST00000526645 TNIKQ9UKE5 1360 aa19.29■□□□□ 0.68
CTSB-212ENST00000526645 UHRF1BP1LA0JNW5 1464 aa19.28■□□□□ 0.68
CTSB-212ENST00000526645 TEX14Q8IWB6 1497 aa19.24■□□□□ 0.67
CTSB-212ENST00000526645 IQGAP2Q13576 1575 aa19.23■□□□□ 0.67
CTSB-212ENST00000526645 HECW2Q9P2P5 1572 aa19.23■□□□□ 0.67
CTSB-212ENST00000526645 MAP3K4Q9Y6R4 1608 aa19.23■□□□□ 0.67
CTSB-212ENST00000526645 UACAQ9BZF9 1416 aa19.19■□□□□ 0.66
CTSB-212ENST00000526645 EPRSP07814 1512 aaKnown RBP19.19■□□□□ 0.66
CTSB-212ENST00000526645 KDM5BQ9UGL1 1544 aa19.18■□□□□ 0.66
CTSB-212ENST00000526645 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
CTSB-212ENST00000526645 COL17A1Q9UMD9 1497 aaPredicted RBP19.16■□□□□ 0.66
CTSB-212ENST00000526645 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
CTSB-212ENST00000526645 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
CTSB-212ENST00000526645 ZCCHC11Q5TAX3 1644 aaKnown RBP19.13■□□□□ 0.65
CTSB-212ENST00000526645 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
CTSB-212ENST00000526645 WDR7Q9Y4E6 1490 aa19.07■□□□□ 0.64
CTSB-212ENST00000526645 KIAA0556O60303 1618 aa19.07■□□□□ 0.64
CTSB-212ENST00000526645 CFAP43Q8NDM7 1665 aa19.04■□□□□ 0.64
CTSB-212ENST00000526645 MAGI3Q5TCQ9 1506 aa19.03■□□□□ 0.64
CTSB-212ENST00000526645 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
CTSB-212ENST00000526645 CD109Q6YHK3 1445 aa18.96■□□□□ 0.63
CTSB-212ENST00000526645 KIF21BO75037 1637 aa18.94■□□□□ 0.62
CTSB-212ENST00000526645 FBXO41Q8TF61 875 aa18.94■□□□□ 0.62
CTSB-212ENST00000526645 GOLGA3Q08378 1498 aa18.91■□□□□ 0.62
CTSB-212ENST00000526645 CTTNBP2Q8WZ74 1663 aa18.91■□□□□ 0.62
CTSB-212ENST00000526645 ABCA8O94911 1581 aa18.9■□□□□ 0.62
CTSB-212ENST00000526645 ARAP3Q8WWN8 1544 aa18.89■□□□□ 0.61
CTSB-212ENST00000526645 ADAMTSL3P82987 1691 aa18.83■□□□□ 0.61
CTSB-212ENST00000526645 PTPRMP28827 1452 aa18.82■□□□□ 0.6
CTSB-212ENST00000526645 PHLDB1Q86UU1 1377 aa18.81■□□□□ 0.6
CTSB-212ENST00000526645 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
CTSB-212ENST00000526645 ABCA9Q8IUA7 1624 aa18.78■□□□□ 0.6
CTSB-212ENST00000526645 PCF11O94913 1555 aaKnown RBP18.76■□□□□ 0.59
CTSB-212ENST00000526645 BCORL1Q5H9F3 1711 aa18.74■□□□□ 0.59
CTSB-212ENST00000526645 NEO1Q92859 1461 aa18.74■□□□□ 0.59
CTSB-212ENST00000526645 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
CTSB-212ENST00000526645 MADDQ8WXG6 1647 aa18.71■□□□□ 0.59
CTSB-212ENST00000526645 LMTK3Q96Q04 1460 aa18.71■□□□□ 0.59
CTSB-212ENST00000526645 ATP10BO94823 1461 aa18.69■□□□□ 0.58
CTSB-212ENST00000526645 FRMPD1Q5SYB0 1578 aa18.68■□□□□ 0.58
CTSB-212ENST00000526645 PRXQ9BXM0 1461 aa18.66■□□□□ 0.58
CTSB-212ENST00000526645 ARHGEF40Q8TER5 1519 aa18.66■□□□□ 0.58
CTSB-212ENST00000526645 RAPGEF3O95398 923 aa18.63■□□□□ 0.57
CTSB-212ENST00000526645 RIMS1Q86UR5 1692 aaKnown RBP18.63■□□□□ 0.57
CTSB-212ENST00000526645 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
CTSB-212ENST00000526645 RAPGEF6Q8TEU7 1601 aa18.62■□□□□ 0.57
CTSB-212ENST00000526645 SAMD9Q5K651 1589 aa18.6■□□□□ 0.57
CTSB-212ENST00000526645 CFAP74Q9C0B2 1584 aa18.6■□□□□ 0.57
CTSB-212ENST00000526645 RICTORQ6R327 1708 aa18.58■□□□□ 0.57
CTSB-212ENST00000526645 FANCAO15360 1455 aa18.58■□□□□ 0.56
CTSB-212ENST00000526645 POGZQ7Z3K3 1410 aa18.57■□□□□ 0.56
CTSB-212ENST00000526645 ARID3CA6NKF2 412 aa18.57■□□□□ 0.56
CTSB-212ENST00000526645 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
CTSB-212ENST00000526645 ZMYM4Q5VZL5 1548 aa18.55■□□□□ 0.56
CTSB-212ENST00000526645 FHOD3Q2V2M9 1422 aa18.55■□□□□ 0.56
CTSB-212ENST00000526645 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
CTSB-212ENST00000526645 EFCAB5A4FU69 1503 aa18.53■□□□□ 0.56
CTSB-212ENST00000526645 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.55
CTSB-212ENST00000526645 ZFYVE16Q7Z3T8 1539 aa18.5■□□□□ 0.55
CTSB-212ENST00000526645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
CTSB-212ENST00000526645 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
CTSB-212ENST00000526645 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
CTSB-212ENST00000526645 MAGI2Q86UL8 1455 aa18.5■□□□□ 0.55
CTSB-212ENST00000526645 CERKQ8TCT0 537 aa18.49■□□□□ 0.55
CTSB-212ENST00000526645 TTC37Q6PGP7 1564 aa18.49■□□□□ 0.55
CTSB-212ENST00000526645 HSPA2P54652 639 aa18.48■□□□□ 0.55
CTSB-212ENST00000526645 FER1L4A9Z1Z3 1794 aa18.47■□□□□ 0.55
CTSB-212ENST00000526645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.44■□□□□ 0.545e-6■□□□□ 9.5
CTSB-212ENST00000526645 PREX1Q8TCU6 1659 aa18.44■□□□□ 0.54
CTSB-212ENST00000526645 SIGLEC1Q9BZZ2 1709 aa18.43■□□□□ 0.54
CTSB-212ENST00000526645 YEATS2Q9ULM3 1422 aa18.42■□□□□ 0.54
CTSB-212ENST00000526645 PLEKHD1A6NEE1 506 aa18.42■□□□□ 0.54
CTSB-212ENST00000526645 HECW1Q76N89 1606 aa18.41■□□□□ 0.54
CTSB-212ENST00000526645 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.54
CTSB-212ENST00000526645 PLPPR3Q6T4P5 718 aa18.37■□□□□ 0.53
CTSB-212ENST00000526645 DISP3Q9P2K9 1392 aa18.36■□□□□ 0.53
CTSB-212ENST00000526645 C9orf84Q5VXU9 1444 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms