RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
CTSB-212ENST00000526645 ABCC9O60706 1549 aa25.53■■□□□ 1.68
CTSB-212ENST00000526645 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.63
CTSB-212ENST00000526645 DNAJC5BQ9UF47 199 aa24.24■■□□□ 1.47
CTSB-212ENST00000526645 RB1CC1Q8TDY2 1594 aa24.22■■□□□ 1.47
CTSB-212ENST00000526645 NACADO15069 1562 aa23.95■■□□□ 1.42
CTSB-212ENST00000526645 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
CTSB-212ENST00000526645 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
CTSB-212ENST00000526645 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
CTSB-212ENST00000526645 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
CTSB-212ENST00000526645 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
CTSB-212ENST00000526645 SHROOM4Q9ULL8 1493 aa23.27■■□□□ 1.32
CTSB-212ENST00000526645 CC2D2AQ9P2K1 1620 aa23.09■■□□□ 1.29
CTSB-212ENST00000526645 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
CTSB-212ENST00000526645 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
CTSB-212ENST00000526645 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
CTSB-212ENST00000526645 EIF4G1Q04637 1599 aaKnown RBP22.96■■□□□ 1.27
CTSB-212ENST00000526645 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
CTSB-212ENST00000526645 DNAJC5Q9H3Z4 198 aa22.7■■□□□ 1.22
CTSB-212ENST00000526645 CUX2O14529 1486 aa22.31■■□□□ 1.16
CTSB-212ENST00000526645 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
CTSB-212ENST00000526645 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
CTSB-212ENST00000526645 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
CTSB-212ENST00000526645 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
CTSB-212ENST00000526645 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
CTSB-212ENST00000526645 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
CTSB-212ENST00000526645 NESP48681 1621 aa21.78■■□□□ 1.08
CTSB-212ENST00000526645 THOC2Q8NI27 1593 aaKnown RBP21.76■■□□□ 1.07
CTSB-212ENST00000526645 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
CTSB-212ENST00000526645 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
CTSB-212ENST00000526645 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
CTSB-212ENST00000526645 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
CTSB-212ENST00000526645 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
CTSB-212ENST00000526645 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
CTSB-212ENST00000526645 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
CTSB-212ENST00000526645 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
CTSB-212ENST00000526645 WDR62O43379 1518 aa21.37■■□□□ 1.01
CTSB-212ENST00000526645 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
CTSB-212ENST00000526645 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
CTSB-212ENST00000526645 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
CTSB-212ENST00000526645 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
CTSB-212ENST00000526645 OSCARQ8IYS5 282 aa21.11■□□□□ 0.97
CTSB-212ENST00000526645 WIZO95785 1651 aa21.09■□□□□ 0.97
CTSB-212ENST00000526645 CFTRP13569 1480 aa21.03■□□□□ 0.96
CTSB-212ENST00000526645 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
CTSB-212ENST00000526645 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
CTSB-212ENST00000526645 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
CTSB-212ENST00000526645 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
CTSB-212ENST00000526645 TOP2AP11388 1531 aaKnown RBP20.87■□□□□ 0.93
CTSB-212ENST00000526645 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
CTSB-212ENST00000526645 ARHGEF11O15085 1522 aa20.83■□□□□ 0.92
CTSB-212ENST00000526645 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
CTSB-212ENST00000526645 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
CTSB-212ENST00000526645 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
CTSB-212ENST00000526645 EIF4G3O43432 1585 aaKnown RBP20.68■□□□□ 0.9
CTSB-212ENST00000526645 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
CTSB-212ENST00000526645 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
CTSB-212ENST00000526645 CHD1O14646 1710 aa20.59■□□□□ 0.89
CTSB-212ENST00000526645 CYB5RLQ6IPT4 315 aa20.59■□□□□ 0.89
CTSB-212ENST00000526645 DNMBPQ6XZF7 1577 aa20.59■□□□□ 0.89
CTSB-212ENST00000526645 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
CTSB-212ENST00000526645 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
CTSB-212ENST00000526645 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
CTSB-212ENST00000526645 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
CTSB-212ENST00000526645 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.871e-7■■■■■ 35.8
CTSB-212ENST00000526645 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
CTSB-212ENST00000526645 WDR97A6NE52 1622 aa20.41■□□□□ 0.86
CTSB-212ENST00000526645 FBLN2P98095 1184 aa20.39■□□□□ 0.85
CTSB-212ENST00000526645 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
CTSB-212ENST00000526645 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
CTSB-212ENST00000526645 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
CTSB-212ENST00000526645 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
CTSB-212ENST00000526645 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
CTSB-212ENST00000526645 SOGA1O94964 1423 aa20.29■□□□□ 0.84
CTSB-212ENST00000526645 RAD54L2Q9Y4B4 1467 aa20.29■□□□□ 0.84
CTSB-212ENST00000526645 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
CTSB-212ENST00000526645 FGD5Q6ZNL6 1462 aa20.23■□□□□ 0.83
CTSB-212ENST00000526645 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
CTSB-212ENST00000526645 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
CTSB-212ENST00000526645 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
CTSB-212ENST00000526645 GAPVD1Q14C86 1478 aa20.16■□□□□ 0.82
CTSB-212ENST00000526645 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
CTSB-212ENST00000526645 CUX1P39880 1505 aa20.12■□□□□ 0.81
CTSB-212ENST00000526645 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
CTSB-212ENST00000526645 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
CTSB-212ENST00000526645 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
CTSB-212ENST00000526645 ERCC6L2Q5T890 1561 aa19.93■□□□□ 0.78
CTSB-212ENST00000526645 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
CTSB-212ENST00000526645 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
CTSB-212ENST00000526645 NUP160Q12769 1436 aa19.91■□□□□ 0.78
CTSB-212ENST00000526645 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
CTSB-212ENST00000526645 KIF13AQ9H1H9 1805 aa19.86■□□□□ 0.77
CTSB-212ENST00000526645 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
CTSB-212ENST00000526645 FHAD1B1AJZ9 1412 aa19.81■□□□□ 0.76
CTSB-212ENST00000526645 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
CTSB-212ENST00000526645 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
CTSB-212ENST00000526645 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
CTSB-212ENST00000526645 PRG4Q92954 1404 aaPredicted RBP19.71■□□□□ 0.75
CTSB-212ENST00000526645 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
CTSB-212ENST00000526645 MAPKBP1O60336 1514 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms