RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 SYNJ2O15056 1496 aa31.41■■■□□ 2.62
PPP1CA-204ENST00000526510 GRIN2AQ12879 1464 aa31.41■■■□□ 2.62
PPP1CA-204ENST00000526510 VPS8Q8N3P4 1428 aa31.36■■■□□ 2.61
PPP1CA-204ENST00000526510 IQGAP2Q13576 1575 aa31.3■■■□□ 2.6
PPP1CA-204ENST00000526510 EFCAB5A4FU69 1503 aa31.29■■■□□ 2.6
PPP1CA-204ENST00000526510 SAMD9Q5K651 1589 aa31.27■■■□□ 2.6
PPP1CA-204ENST00000526510 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
PPP1CA-204ENST00000526510 CHMP7Q8WUX9 453 aaPredicted RBP31.27■■■□□ 2.6
PPP1CA-204ENST00000526510 CHD1O14646 1710 aa31.26■■■□□ 2.59
PPP1CA-204ENST00000526510 KIAA0586Q9BVV6 1533 aa31.22■■■□□ 2.59
PPP1CA-204ENST00000526510 FBLN2P98095 1184 aa31.21■■■□□ 2.59
PPP1CA-204ENST00000526510 NUP160Q12769 1436 aa31.19■■■□□ 2.58
PPP1CA-204ENST00000526510 FHOD3Q2V2M9 1422 aa31.16■■■□□ 2.58
PPP1CA-204ENST00000526510 P3H3Q8IVL6 736 aa31.16■■■□□ 2.58
PPP1CA-204ENST00000526510 UGGT2Q9NYU1 1516 aa31.15■■■□□ 2.58
PPP1CA-204ENST00000526510 PPARGC1BQ86YN6 1023 aaKnown RBP31.14■■■□□ 2.58
PPP1CA-204ENST00000526510 PCF11O94913 1555 aaKnown RBP31.04■■■□□ 2.56
PPP1CA-204ENST00000526510 DISP1Q96F81 1524 aa31.01■■■□□ 2.56
PPP1CA-204ENST00000526510 KIAA0556O60303 1618 aa31■■■□□ 2.55
PPP1CA-204ENST00000526510 FMN1Q68DA7 1419 aa30.96■■■□□ 2.55
PPP1CA-204ENST00000526510 TRIM26Q12899 539 aaPredicted RBP30.96■■■□□ 2.55
PPP1CA-204ENST00000526510 CASKIN1Q8WXD9 1431 aa30.92■■■□□ 2.54
PPP1CA-204ENST00000526510 APLP2Q06481 763 aa30.92■■■□□ 2.54
PPP1CA-204ENST00000526510 PCGF6Q9BYE7 350 aa30.92■■■□□ 2.54
PPP1CA-204ENST00000526510 FYCO1Q9BQS8 1478 aa30.92■■■□□ 2.54
PPP1CA-204ENST00000526510 LRRIQ1Q96JM4 1722 aa30.9■■■□□ 2.54
PPP1CA-204ENST00000526510 TTBK1Q5TCY1 1321 aaPredicted RBP30.9■■■□□ 2.54
PPP1CA-204ENST00000526510 JPH4Q96JJ6 628 aa30.89■■■□□ 2.54
PPP1CA-204ENST00000526510 TIAM1Q13009 1591 aa30.88■■■□□ 2.53
PPP1CA-204ENST00000526510 CFAP43Q8NDM7 1665 aa30.88■■■□□ 2.53
PPP1CA-204ENST00000526510 SHROOM2Q13796 1616 aa30.86■■■□□ 2.53
PPP1CA-204ENST00000526510 MAP3K1Q13233 1512 aa30.86■■■□□ 2.53
PPP1CA-204ENST00000526510 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
PPP1CA-204ENST00000526510 KANK4Q5T7N3 995 aaPredicted RBP30.81■■■□□ 2.52
PPP1CA-204ENST00000526510 CARMIL2Q6F5E8 1435 aa30.78■■■□□ 2.52
PPP1CA-204ENST00000526510 ATP1B4Q9UN42 357 aaPredicted RBP30.74■■■□□ 2.51
PPP1CA-204ENST00000526510 PRG4Q92954 1404 aaPredicted RBP30.74■■■□□ 2.51
PPP1CA-204ENST00000526510 HECW1Q76N89 1606 aa30.73■■■□□ 2.51
PPP1CA-204ENST00000526510 LRRC9Q6ZRR7 1453 aa30.69■■■□□ 2.5
PPP1CA-204ENST00000526510 RAPGEF6Q8TEU7 1601 aa30.69■■■□□ 2.5
PPP1CA-204ENST00000526510 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
PPP1CA-204ENST00000526510 EPRSP07814 1512 aaKnown RBP30.6■■■□□ 2.49
PPP1CA-204ENST00000526510 CCDC18Q5T9S5 1454 aa30.6■■■□□ 2.49
PPP1CA-204ENST00000526510 PLB1Q6P1J6 1458 aa30.59■■■□□ 2.49
PPP1CA-204ENST00000526510 NUP153P49790 1475 aaKnown RBP30.58■■■□□ 2.49
PPP1CA-204ENST00000526510 ABCA8O94911 1581 aa30.57■■■□□ 2.48
PPP1CA-204ENST00000526510 CDK13Q14004 1512 aaKnown RBP30.57■■■□□ 2.48
PPP1CA-204ENST00000526510 MAGI3Q5TCQ9 1506 aa30.53■■■□□ 2.48
PPP1CA-204ENST00000526510 PTPRGP23470 1445 aa30.51■■■□□ 2.47
PPP1CA-204ENST00000526510 OSCARQ8IYS5 282 aa30.47■■■□□ 2.47
PPP1CA-204ENST00000526510 EHBP1L1Q8N3D4 1523 aa30.46■■■□□ 2.47
PPP1CA-204ENST00000526510 MTUS2Q5JR59 1369 aa30.45■■■□□ 2.47
PPP1CA-204ENST00000526510 ARID3CA6NKF2 412 aa30.45■■■□□ 2.46
PPP1CA-204ENST00000526510 SUPT6HQ7KZ85 1726 aaKnown RBP30.43■■■□□ 2.46
PPP1CA-204ENST00000526510 RRBP1Q9P2E9 1410 aaKnown RBP30.41■■■□□ 2.46
PPP1CA-204ENST00000526510 PHLDB1Q86UU1 1377 aa30.41■■■□□ 2.46
PPP1CA-204ENST00000526510 UACAQ9BZF9 1416 aa30.35■■■□□ 2.45
PPP1CA-204ENST00000526510 ARHGEF11O15085 1522 aa30.34■■■□□ 2.45
PPP1CA-204ENST00000526510 NCOA2Q15596 1464 aa30.34■■■□□ 2.45
PPP1CA-204ENST00000526510 ATP10BO94823 1461 aa30.33■■■□□ 2.45
PPP1CA-204ENST00000526510 ABCC2Q92887 1545 aa30.3■■■□□ 2.44
PPP1CA-204ENST00000526510 CCNB3Q8WWL7 1395 aa30.29■■■□□ 2.44
PPP1CA-204ENST00000526510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.27■■■□□ 2.44
PPP1CA-204ENST00000526510 HNRNPUL2Q1KMD3 747 aaKnown RBP30.27■■■□□ 2.44
PPP1CA-204ENST00000526510 ADCY10Q96PN6 1610 aa30.24■■■□□ 2.43
PPP1CA-204ENST00000526510 TROQ12816 1431 aaPredicted RBP30.23■■■□□ 2.43
PPP1CA-204ENST00000526510 CDK11AQ9UQ88 783 aaPredicted RBP30.22■■■□□ 2.43
PPP1CA-204ENST00000526510 UHRF1BP1LA0JNW5 1464 aa30.21■■■□□ 2.43
PPP1CA-204ENST00000526510 KIF14Q15058 1648 aa30.2■■■□□ 2.42
PPP1CA-204ENST00000526510 MYOM3Q5VTT5 1437 aa30.19■■■□□ 2.42
PPP1CA-204ENST00000526510 FGD6Q6ZV73 1430 aa30.19■■■□□ 2.42
PPP1CA-204ENST00000526510 ZCCHC11Q5TAX3 1644 aaKnown RBP30.16■■■□□ 2.42
PPP1CA-204ENST00000526510 KDM5BQ9UGL1 1544 aa30.11■■■□□ 2.41
PPP1CA-204ENST00000526510 PTPN23Q9H3S7 1636 aa30.11■■■□□ 2.41
PPP1CA-204ENST00000526510 PLEKHD1A6NEE1 506 aa30.1■■■□□ 2.41
PPP1CA-204ENST00000526510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.09■■■□□ 2.41
PPP1CA-204ENST00000526510 FAM50AQ14320 339 aaKnown RBP30.06■■■□□ 2.4
PPP1CA-204ENST00000526510 ITSN2Q9NZM3 1697 aa30.04■■■□□ 2.4
PPP1CA-204ENST00000526510 CDC42BPAQ5VT25 1732 aa30.03■■■□□ 2.4
PPP1CA-204ENST00000526510 ABCC10Q5T3U5 1492 aa30.03■■■□□ 2.4
PPP1CA-204ENST00000526510 TCOF1Q13428 1488 aaKnown RBP30.02■■■□□ 2.4
PPP1CA-204ENST00000526510 MIA2Q96PC5 1412 aa30.01■■■□□ 2.4
PPP1CA-204ENST00000526510 ITGAEP38570 1179 aa29.99■■■□□ 2.39
PPP1CA-204ENST00000526510 GPATCH8Q9UKJ3 1502 aaKnown RBP29.98■■■□□ 2.39
PPP1CA-204ENST00000526510 RIMBP3CA6NJZ7 1639 aa29.98■■■□□ 2.39
PPP1CA-204ENST00000526510 RIMBP3BA6NNM3 1639 aa29.98■■■□□ 2.39
PPP1CA-204ENST00000526510 RIMBP3Q9UFD9 1639 aa29.98■■■□□ 2.39
PPP1CA-204ENST00000526510 TTC37Q6PGP7 1564 aa29.91■■■□□ 2.38
PPP1CA-204ENST00000526510 HRCP23327 699 aa29.9■■■□□ 2.38
PPP1CA-204ENST00000526510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.9■■■□□ 2.38
PPP1CA-204ENST00000526510 CDC42BPBQ9Y5S2 1711 aa29.89■■■□□ 2.38
PPP1CA-204ENST00000526510 PTPRKQ15262 1439 aa29.88■■■□□ 2.37
PPP1CA-204ENST00000526510 PREX2Q70Z35 1606 aa29.87■■■□□ 2.37
PPP1CA-204ENST00000526510 MYO5CQ9NQX4 1742 aa29.84■■■□□ 2.37
PPP1CA-204ENST00000526510 ZNF644Q9H582 1327 aaPredicted RBP29.83■■■□□ 2.37
PPP1CA-204ENST00000526510 CAMSAP2Q08AD1 1489 aa29.83■■■□□ 2.37
PPP1CA-204ENST00000526510 CFDP1Q9UEE9 299 aaPredicted RBP29.82■■■□□ 2.36
PPP1CA-204ENST00000526510 DNMT1P26358 1616 aaKnown RBP29.81■■■□□ 2.36
PPP1CA-204ENST00000526510 WDR7Q9Y4E6 1490 aa29.81■■■□□ 2.36
PPP1CA-204ENST00000526510 KCNH8Q96L42 1107 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms