RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 DIP2BQ9P265 1576 aa22.58■■□□□ 1.2
CCDC90B-205ENST00000525916 JPH4Q96JJ6 628 aa22.57■■□□□ 1.2
CCDC90B-205ENST00000525916 ABCC10Q5T3U5 1492 aa22.57■■□□□ 1.2
CCDC90B-205ENST00000525916 ADCY10Q96PN6 1610 aa22.57■■□□□ 1.2
CCDC90B-205ENST00000525916 MAPKBP1O60336 1514 aa22.56■■□□□ 1.2
CCDC90B-205ENST00000525916 TSPOAP1O95153 1857 aa22.55■■□□□ 1.2
CCDC90B-205ENST00000525916 FAM69CQ0P6D2 419 aa22.53■■□□□ 1.2
CCDC90B-205ENST00000525916 KDM6BO15054 1643 aa22.49■■□□□ 1.19
CCDC90B-205ENST00000525916 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
CCDC90B-205ENST00000525916 KDM4FA0A1W2PPD8 638 aa22.37■■□□□ 1.17
CCDC90B-205ENST00000525916 KIAA0586Q9BVV6 1533 aa22.36■■□□□ 1.17
CCDC90B-205ENST00000525916 CUL7Q14999 1698 aa22.36■■□□□ 1.17
CCDC90B-205ENST00000525916 PPRC1Q5VV67 1664 aaKnown RBP22.3■■□□□ 1.16
CCDC90B-205ENST00000525916 IGF1RP08069 1367 aa22.26■■□□□ 1.15
CCDC90B-205ENST00000525916 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
CCDC90B-205ENST00000525916 PTPRGP23470 1445 aa22.23■■□□□ 1.15
CCDC90B-205ENST00000525916 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
CCDC90B-205ENST00000525916 ABCC2Q92887 1545 aa22.21■■□□□ 1.15
CCDC90B-205ENST00000525916 GLI2P10070 1586 aa22.19■■□□□ 1.14
CCDC90B-205ENST00000525916 ASXL2Q76L83 1435 aa22.18■■□□□ 1.14
CCDC90B-205ENST00000525916 IQGAP2Q13576 1575 aa22.16■■□□□ 1.14
CCDC90B-205ENST00000525916 TNIKQ9UKE5 1360 aa22.15■■□□□ 1.14
CCDC90B-205ENST00000525916 ADGRL1O94910 1474 aa22.15■■□□□ 1.14
CCDC90B-205ENST00000525916 CARMIL2Q6F5E8 1435 aa22.14■■□□□ 1.14
CCDC90B-205ENST00000525916 ILDR1Q86SU0 546 aaPredicted RBP22.14■■□□□ 1.13
CCDC90B-205ENST00000525916 PLB1Q6P1J6 1458 aa22.14■■□□□ 1.13
CCDC90B-205ENST00000525916 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
CCDC90B-205ENST00000525916 MAP3K4Q9Y6R4 1608 aa22.12■■□□□ 1.13
CCDC90B-205ENST00000525916 UHRF1BP1LA0JNW5 1464 aa22.1■■□□□ 1.13
CCDC90B-205ENST00000525916 ZCCHC11Q5TAX3 1644 aaKnown RBP22.07■■□□□ 1.12
CCDC90B-205ENST00000525916 COL17A1Q9UMD9 1497 aaPredicted RBP22.07■■□□□ 1.12
CCDC90B-205ENST00000525916 UACAQ9BZF9 1416 aa22.06■■□□□ 1.12
CCDC90B-205ENST00000525916 DISP1Q96F81 1524 aa22.06■■□□□ 1.12
CCDC90B-205ENST00000525916 EPRSP07814 1512 aaKnown RBP22.05■■□□□ 1.12
CCDC90B-205ENST00000525916 HECW2Q9P2P5 1572 aa22.03■■□□□ 1.12
CCDC90B-205ENST00000525916 KDM5BQ9UGL1 1544 aa22.02■■□□□ 1.12
CCDC90B-205ENST00000525916 TEX14Q8IWB6 1497 aa21.99■■□□□ 1.11
CCDC90B-205ENST00000525916 KIAA0556O60303 1618 aa21.98■■□□□ 1.11
CCDC90B-205ENST00000525916 UGGT2Q9NYU1 1516 aa21.97■■□□□ 1.11
CCDC90B-205ENST00000525916 CTTNBP2Q8WZ74 1663 aa21.91■■□□□ 1.1
CCDC90B-205ENST00000525916 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
CCDC90B-205ENST00000525916 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
CCDC90B-205ENST00000525916 CFAP43Q8NDM7 1665 aa21.88■■□□□ 1.09
CCDC90B-205ENST00000525916 KIF21BO75037 1637 aa21.83■■□□□ 1.08
CCDC90B-205ENST00000525916 MAGI3Q5TCQ9 1506 aa21.8■■□□□ 1.08
CCDC90B-205ENST00000525916 CD109Q6YHK3 1445 aa21.79■■□□□ 1.08
CCDC90B-205ENST00000525916 ABCA8O94911 1581 aa21.78■■□□□ 1.08
CCDC90B-205ENST00000525916 KCNH8Q96L42 1107 aa21.72■■□□□ 1.07
CCDC90B-205ENST00000525916 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
CCDC90B-205ENST00000525916 ARAP3Q8WWN8 1544 aa21.64■■□□□ 1.05
CCDC90B-205ENST00000525916 ADAMTSL3P82987 1691 aa21.63■■□□□ 1.05
CCDC90B-205ENST00000525916 ABCA9Q8IUA7 1624 aa21.61■■□□□ 1.05
CCDC90B-205ENST00000525916 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
CCDC90B-205ENST00000525916 PTPRMP28827 1452 aa21.57■■□□□ 1.04
CCDC90B-205ENST00000525916 BCORL1Q5H9F3 1711 aa21.56■■□□□ 1.04
CCDC90B-205ENST00000525916 ATP10BO94823 1461 aa21.56■■□□□ 1.04
CCDC90B-205ENST00000525916 PRXQ9BXM0 1461 aa21.56■■□□□ 1.04
CCDC90B-205ENST00000525916 FBXO41Q8TF61 875 aa21.55■■□□□ 1.04
CCDC90B-205ENST00000525916 FRMPD1Q5SYB0 1578 aa21.53■■□□□ 1.04
CCDC90B-205ENST00000525916 MADDQ8WXG6 1647 aa21.53■■□□□ 1.04
CCDC90B-205ENST00000525916 RAPGEF6Q8TEU7 1601 aa21.51■■□□□ 1.03
CCDC90B-205ENST00000525916 P3H3Q8IVL6 736 aa21.49■■□□□ 1.03
CCDC90B-205ENST00000525916 RAPGEF3O95398 923 aa21.48■■□□□ 1.03
CCDC90B-205ENST00000525916 PCF11O94913 1555 aaKnown RBP21.48■■□□□ 1.03
CCDC90B-205ENST00000525916 SAMD9Q5K651 1589 aa21.48■■□□□ 1.03
CCDC90B-205ENST00000525916 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
CCDC90B-205ENST00000525916 NEO1Q92859 1461 aa21.47■■□□□ 1.03
CCDC90B-205ENST00000525916 RIMS1Q86UR5 1692 aaKnown RBP21.47■■□□□ 1.03
CCDC90B-205ENST00000525916 LMTK3Q96Q04 1460 aa21.44■■□□□ 1.02
CCDC90B-205ENST00000525916 ARHGEF40Q8TER5 1519 aa21.43■■□□□ 1.02
CCDC90B-205ENST00000525916 RICTORQ6R327 1708 aa21.43■■□□□ 1.02
CCDC90B-205ENST00000525916 FAM9AQ8IZU1 332 aaPredicted RBP21.41■■□□□ 1.02
CCDC90B-205ENST00000525916 ARID4BQ4LE39 1312 aaPredicted RBP21.4■■□□□ 1.02
CCDC90B-205ENST00000525916 NUP153P49790 1475 aaKnown RBP21.37■■□□□ 1.01
CCDC90B-205ENST00000525916 SIGLEC1Q9BZZ2 1709 aa21.36■■□□□ 1.01
CCDC90B-205ENST00000525916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
CCDC90B-205ENST00000525916 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
CCDC90B-205ENST00000525916 CFAP74Q9C0B2 1584 aa21.34■■□□□ 1.01
CCDC90B-205ENST00000525916 DENND4BO75064 1496 aaPredicted RBP21.32■■□□□ 1
CCDC90B-205ENST00000525916 FER1L4A9Z1Z3 1794 aa21.31■■□□□ 1
CCDC90B-205ENST00000525916 TTC37Q6PGP7 1564 aa21.29■■□□□ 1
CCDC90B-205ENST00000525916 ZMYM4Q5VZL5 1548 aa21.29■■□□□ 1
CCDC90B-205ENST00000525916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.28■■□□□ 1
CCDC90B-205ENST00000525916 FHOD3Q2V2M9 1422 aa21.28■■□□□ 1
CCDC90B-205ENST00000525916 AKNAQ7Z591 1439 aa21.28■■□□□ 1
CCDC90B-205ENST00000525916 FANCAO15360 1455 aa21.27■■□□□ 1
CCDC90B-205ENST00000525916 HSPA2P54652 639 aa21.27■■□□□ 1
CCDC90B-205ENST00000525916 ZFYVE16Q7Z3T8 1539 aa21.26■□□□□ 0.99
CCDC90B-205ENST00000525916 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
CCDC90B-205ENST00000525916 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
CCDC90B-205ENST00000525916 YEATS2Q9ULM3 1422 aa21.23■□□□□ 0.99
CCDC90B-205ENST00000525916 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
CCDC90B-205ENST00000525916 POGZQ7Z3K3 1410 aa21.22■□□□□ 0.99
CCDC90B-205ENST00000525916 HECW1Q76N89 1606 aa21.22■□□□□ 0.99
CCDC90B-205ENST00000525916 CSRNP3Q8WYN3 585 aa21.21■□□□□ 0.99
CCDC90B-205ENST00000525916 PLEKHD1A6NEE1 506 aa21.2■□□□□ 0.98
CCDC90B-205ENST00000525916 PREX1Q8TCU6 1659 aa21.17■□□□□ 0.98
CCDC90B-205ENST00000525916 CDK13Q14004 1512 aaKnown RBP21.15■□□□□ 0.98
CCDC90B-205ENST00000525916 MAGI2Q86UL8 1455 aa21.15■□□□□ 0.98
CCDC90B-205ENST00000525916 MLECQ14165 292 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms