RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 NISCHQ9Y2I1 1504 aa32.04■■■□□ 2.72
CCDC90B-205ENST00000525916 ABCC9O60706 1549 aa29.36■■■□□ 2.29
CCDC90B-205ENST00000525916 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
CCDC90B-205ENST00000525916 DNAJC5BQ9UF47 199 aa27.86■■■□□ 2.05
CCDC90B-205ENST00000525916 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
CCDC90B-205ENST00000525916 NACADO15069 1562 aa27.46■■□□□ 1.99
CCDC90B-205ENST00000525916 UNC13AQ9UPW8 1703 aa27.33■■□□□ 1.96
CCDC90B-205ENST00000525916 PABPN1Q86U42 306 aaKnown RBP eCLIP27.22■■□□□ 1.95
CCDC90B-205ENST00000525916 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
CCDC90B-205ENST00000525916 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.92
CCDC90B-205ENST00000525916 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
CCDC90B-205ENST00000525916 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
CCDC90B-205ENST00000525916 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
CCDC90B-205ENST00000525916 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
CCDC90B-205ENST00000525916 CECR2Q9BXF3 1484 aa26.47■■□□□ 1.83
CCDC90B-205ENST00000525916 DCAF1Q9Y4B6 1507 aa26.42■■□□□ 1.82
CCDC90B-205ENST00000525916 SCRIBQ14160 1630 aa26.42■■□□□ 1.82
CCDC90B-205ENST00000525916 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
CCDC90B-205ENST00000525916 DNAJC5Q9H3Z4 198 aa25.84■■□□□ 1.73
CCDC90B-205ENST00000525916 CUX2O14529 1486 aa25.45■■□□□ 1.66
CCDC90B-205ENST00000525916 ERCC6Q03468 1493 aa25.36■■□□□ 1.65
CCDC90B-205ENST00000525916 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
CCDC90B-205ENST00000525916 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
CCDC90B-205ENST00000525916 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
CCDC90B-205ENST00000525916 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
CCDC90B-205ENST00000525916 SMARCA2P51531 1590 aa25.13■■□□□ 1.61
CCDC90B-205ENST00000525916 NESP48681 1621 aa25.12■■□□□ 1.61
CCDC90B-205ENST00000525916 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
CCDC90B-205ENST00000525916 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
CCDC90B-205ENST00000525916 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
CCDC90B-205ENST00000525916 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.58
CCDC90B-205ENST00000525916 LAMC3Q9Y6N6 1575 aa24.88■■□□□ 1.57
CCDC90B-205ENST00000525916 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
CCDC90B-205ENST00000525916 MROH2BQ7Z745 1585 aa24.71■■□□□ 1.55
CCDC90B-205ENST00000525916 PDS5BQ9NTI5 1447 aa24.67■■□□□ 1.54
CCDC90B-205ENST00000525916 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
CCDC90B-205ENST00000525916 MRC2Q9UBG0 1479 aa24.53■■□□□ 1.52
CCDC90B-205ENST00000525916 WDR62O43379 1518 aa24.51■■□□□ 1.51
CCDC90B-205ENST00000525916 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
CCDC90B-205ENST00000525916 WIZO95785 1651 aa24.46■■□□□ 1.51
CCDC90B-205ENST00000525916 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
CCDC90B-205ENST00000525916 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
CCDC90B-205ENST00000525916 CFTRP13569 1480 aa24.17■■□□□ 1.46
CCDC90B-205ENST00000525916 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
CCDC90B-205ENST00000525916 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.45
CCDC90B-205ENST00000525916 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
CCDC90B-205ENST00000525916 TOP2AP11388 1531 aaKnown RBP24.06■■□□□ 1.44
CCDC90B-205ENST00000525916 RIMBP3CA6NJZ7 1639 aa24.04■■□□□ 1.44
CCDC90B-205ENST00000525916 RIMBP3BA6NNM3 1639 aa24.04■■□□□ 1.44
CCDC90B-205ENST00000525916 RIMBP3Q9UFD9 1639 aa24.04■■□□□ 1.44
CCDC90B-205ENST00000525916 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
CCDC90B-205ENST00000525916 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
CCDC90B-205ENST00000525916 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
CCDC90B-205ENST00000525916 IFT140Q96RY7 1462 aa23.86■■□□□ 1.41
CCDC90B-205ENST00000525916 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
CCDC90B-205ENST00000525916 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
CCDC90B-205ENST00000525916 CHD1O14646 1710 aa23.77■■□□□ 1.4
CCDC90B-205ENST00000525916 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
CCDC90B-205ENST00000525916 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
CCDC90B-205ENST00000525916 TARBP1Q13395 1621 aaKnown RBP23.66■■□□□ 1.38
CCDC90B-205ENST00000525916 ABCC8Q09428 1581 aa23.65■■□□□ 1.38
CCDC90B-205ENST00000525916 CYB5RLQ6IPT4 315 aa23.64■■□□□ 1.37
CCDC90B-205ENST00000525916 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.37
CCDC90B-205ENST00000525916 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
CCDC90B-205ENST00000525916 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
CCDC90B-205ENST00000525916 TRHP20396 242 aaPredicted RBP23.52■■□□□ 1.36
CCDC90B-205ENST00000525916 FBLN2P98095 1184 aa23.5■■□□□ 1.35
CCDC90B-205ENST00000525916 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
CCDC90B-205ENST00000525916 CLASP1Q7Z460 1538 aa23.39■■□□□ 1.34
CCDC90B-205ENST00000525916 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
CCDC90B-205ENST00000525916 TDRD9Q8NDG6 1382 aaKnown RBP23.37■■□□□ 1.33
CCDC90B-205ENST00000525916 SOGA1O94964 1423 aa23.35■■□□□ 1.33
CCDC90B-205ENST00000525916 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
CCDC90B-205ENST00000525916 SYNJ1O43426 1573 aa23.33■■□□□ 1.33
CCDC90B-205ENST00000525916 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
CCDC90B-205ENST00000525916 MAGI1Q96QZ7 1491 aaPredicted RBP23.28■■□□□ 1.32
CCDC90B-205ENST00000525916 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
CCDC90B-205ENST00000525916 CUX1P39880 1505 aa23.25■■□□□ 1.31
CCDC90B-205ENST00000525916 CHMP7Q8WUX9 453 aaPredicted RBP23.23■■□□□ 1.31
CCDC90B-205ENST00000525916 GRIN2BQ13224 1484 aa23.22■■□□□ 1.31
CCDC90B-205ENST00000525916 SYNJ2O15056 1496 aa23.2■■□□□ 1.3
CCDC90B-205ENST00000525916 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
CCDC90B-205ENST00000525916 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
CCDC90B-205ENST00000525916 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
CCDC90B-205ENST00000525916 ERCC6L2Q5T890 1561 aa23.02■■□□□ 1.28
CCDC90B-205ENST00000525916 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
CCDC90B-205ENST00000525916 GRIN2AQ12879 1464 aa22.94■■□□□ 1.26
CCDC90B-205ENST00000525916 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
CCDC90B-205ENST00000525916 CEP170Q5SW79 1584 aa22.93■■□□□ 1.26
CCDC90B-205ENST00000525916 KIF13AQ9H1H9 1805 aa22.9■■□□□ 1.26
CCDC90B-205ENST00000525916 SHROOM2Q13796 1616 aa22.89■■□□□ 1.25
CCDC90B-205ENST00000525916 NUP160Q12769 1436 aa22.87■■□□□ 1.25
CCDC90B-205ENST00000525916 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
CCDC90B-205ENST00000525916 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
CCDC90B-205ENST00000525916 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
CCDC90B-205ENST00000525916 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
CCDC90B-205ENST00000525916 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
CCDC90B-205ENST00000525916 PRG4Q92954 1404 aaPredicted RBP22.67■■□□□ 1.22
CCDC90B-205ENST00000525916 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
CCDC90B-205ENST00000525916 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms