RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 GRIN2BQ13224 1484 aa29.89■■■□□ 2.38
TM9SF1-203ENST00000524835 ADAMTS12P58397 1594 aa29.88■■■□□ 2.37
TM9SF1-203ENST00000524835 APLP2Q06481 763 aa29.86■■■□□ 2.37
TM9SF1-203ENST00000524835 FHAD1B1AJZ9 1412 aa29.86■■■□□ 2.37
TM9SF1-203ENST00000524835 EFCAB5A4FU69 1503 aa29.84■■■□□ 2.37
TM9SF1-203ENST00000524835 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
TM9SF1-203ENST00000524835 FHOD3Q2V2M9 1422 aa29.7■■■□□ 2.35
TM9SF1-203ENST00000524835 SAMD9Q5K651 1589 aa29.7■■■□□ 2.34
TM9SF1-203ENST00000524835 SNAPC4Q5SXM2 1469 aa29.68■■■□□ 2.34
TM9SF1-203ENST00000524835 MAP3K1Q13233 1512 aa29.65■■■□□ 2.34
TM9SF1-203ENST00000524835 KANK4Q5T7N3 995 aaPredicted RBP29.65■■■□□ 2.34
TM9SF1-203ENST00000524835 P3H3Q8IVL6 736 aa29.65■■■□□ 2.34
TM9SF1-203ENST00000524835 PCF11O94913 1555 aaKnown RBP29.65■■■□□ 2.34
TM9SF1-203ENST00000524835 TIAM1Q13009 1591 aa29.62■■■□□ 2.33
TM9SF1-203ENST00000524835 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
TM9SF1-203ENST00000524835 IQGAP2Q13576 1575 aa29.6■■■□□ 2.33
TM9SF1-203ENST00000524835 FYCO1Q9BQS8 1478 aa29.58■■■□□ 2.33
TM9SF1-203ENST00000524835 GRIN2AQ12879 1464 aa29.56■■■□□ 2.32
TM9SF1-203ENST00000524835 FMN1Q68DA7 1419 aa29.55■■■□□ 2.32
TM9SF1-203ENST00000524835 CASKIN1Q8WXD9 1431 aa29.55■■■□□ 2.32
TM9SF1-203ENST00000524835 CFAP43Q8NDM7 1665 aa29.54■■■□□ 2.32
TM9SF1-203ENST00000524835 SYNJ2O15056 1496 aa29.5■■■□□ 2.31
TM9SF1-203ENST00000524835 LRRC9Q6ZRR7 1453 aa29.47■■■□□ 2.31
TM9SF1-203ENST00000524835 KIAA0586Q9BVV6 1533 aa29.47■■■□□ 2.31
TM9SF1-203ENST00000524835 UGGT2Q9NYU1 1516 aa29.47■■■□□ 2.31
TM9SF1-203ENST00000524835 ZEB1P37275 1124 aaPredicted RBP29.42■■■□□ 2.3
TM9SF1-203ENST00000524835 RRBP1Q9P2E9 1410 aaKnown RBP29.42■■■□□ 2.3
TM9SF1-203ENST00000524835 CEP170Q5SW79 1584 aa29.38■■■□□ 2.29
TM9SF1-203ENST00000524835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.36■■■□□ 2.29
TM9SF1-203ENST00000524835 CHMP7Q8WUX9 453 aaPredicted RBP29.36■■■□□ 2.29
TM9SF1-203ENST00000524835 ATP1B4Q9UN42 357 aaPredicted RBP29.35■■■□□ 2.29
TM9SF1-203ENST00000524835 LRRIQ1Q96JM4 1722 aa29.33■■■□□ 2.29
TM9SF1-203ENST00000524835 NUP160Q12769 1436 aa29.33■■■□□ 2.29
TM9SF1-203ENST00000524835 HNRNPUL2Q1KMD3 747 aaKnown RBP29.32■■■□□ 2.28
TM9SF1-203ENST00000524835 DISP1Q96F81 1524 aa29.32■■■□□ 2.28
TM9SF1-203ENST00000524835 KIAA0556O60303 1618 aa29.3■■■□□ 2.28
TM9SF1-203ENST00000524835 CCNB3Q8WWL7 1395 aa29.28■■■□□ 2.28
TM9SF1-203ENST00000524835 CCER1Q8TC90 406 aaPredicted RBP29.26■■■□□ 2.27
TM9SF1-203ENST00000524835 FBLN2P98095 1184 aa29.26■■■□□ 2.27
TM9SF1-203ENST00000524835 PHLDB1Q86UU1 1377 aa29.24■■■□□ 2.27
TM9SF1-203ENST00000524835 HECW1Q76N89 1606 aa29.22■■■□□ 2.27
TM9SF1-203ENST00000524835 CCDC18Q5T9S5 1454 aa29.19■■■□□ 2.26
TM9SF1-203ENST00000524835 MTUS2Q5JR59 1369 aa29.14■■■□□ 2.25
TM9SF1-203ENST00000524835 EPRSP07814 1512 aaKnown RBP29.12■■■□□ 2.25
TM9SF1-203ENST00000524835 EHBP1L1Q8N3D4 1523 aa29.12■■■□□ 2.25
TM9SF1-203ENST00000524835 MAGI3Q5TCQ9 1506 aa29.09■■■□□ 2.25
TM9SF1-203ENST00000524835 CHD1O14646 1710 aa29.08■■■□□ 2.25
TM9SF1-203ENST00000524835 JPH4Q96JJ6 628 aa29.08■■■□□ 2.25
TM9SF1-203ENST00000524835 CDK13Q14004 1512 aaKnown RBP29.05■■■□□ 2.24
TM9SF1-203ENST00000524835 CARMIL2Q6F5E8 1435 aa29.05■■■□□ 2.24
TM9SF1-203ENST00000524835 RAPGEF6Q8TEU7 1601 aa29.04■■■□□ 2.24
TM9SF1-203ENST00000524835 SUPT6HQ7KZ85 1726 aaKnown RBP29.04■■■□□ 2.24
TM9SF1-203ENST00000524835 NCOA2Q15596 1464 aa29.04■■■□□ 2.24
TM9SF1-203ENST00000524835 NUP153P49790 1475 aaKnown RBP29.02■■■□□ 2.24
TM9SF1-203ENST00000524835 ARHGEF11O15085 1522 aa29.02■■■□□ 2.24
TM9SF1-203ENST00000524835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.99■■■□□ 2.23
TM9SF1-203ENST00000524835 FGD6Q6ZV73 1430 aa28.99■■■□□ 2.23
TM9SF1-203ENST00000524835 MYOM3Q5VTT5 1437 aa28.94■■■□□ 2.22
TM9SF1-203ENST00000524835 ITGAEP38570 1179 aa28.93■■■□□ 2.22
TM9SF1-203ENST00000524835 FAM50AQ14320 339 aaKnown RBP28.93■■■□□ 2.22
TM9SF1-203ENST00000524835 PLB1Q6P1J6 1458 aa28.93■■■□□ 2.22
TM9SF1-203ENST00000524835 ARID3CA6NKF2 412 aa28.88■■■□□ 2.21
TM9SF1-203ENST00000524835 PRG4Q92954 1404 aaPredicted RBP28.88■■■□□ 2.21
TM9SF1-203ENST00000524835 SHROOM2Q13796 1616 aa28.88■■■□□ 2.21
TM9SF1-203ENST00000524835 ABCA8O94911 1581 aa28.86■■■□□ 2.21
TM9SF1-203ENST00000524835 DHX57Q6P158 1386 aaKnown RBP28.84■■■□□ 2.21
TM9SF1-203ENST00000524835 PTPN23Q9H3S7 1636 aa28.8■■■□□ 2.2
TM9SF1-203ENST00000524835 RAB3GAP2Q9H2M9 1393 aa28.79■■■□□ 2.2
TM9SF1-203ENST00000524835 SETD5Q9C0A6 1442 aa28.77■■■□□ 2.2
TM9SF1-203ENST00000524835 TCOF1Q13428 1488 aaKnown RBP28.77■■■□□ 2.2
TM9SF1-203ENST00000524835 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
TM9SF1-203ENST00000524835 CDK11AQ9UQ88 783 aaPredicted RBP28.75■■■□□ 2.19
TM9SF1-203ENST00000524835 CLSPNQ9HAW4 1339 aa28.74■■■□□ 2.19
TM9SF1-203ENST00000524835 TROQ12816 1431 aaPredicted RBP28.74■■■□□ 2.19
TM9SF1-203ENST00000524835 MIA2Q96PC5 1412 aa28.74■■■□□ 2.19
TM9SF1-203ENST00000524835 PTPRGP23470 1445 aa28.73■■■□□ 2.19
TM9SF1-203ENST00000524835 PTPRKQ15262 1439 aa28.71■■■□□ 2.19
TM9SF1-203ENST00000524835 ADCY10Q96PN6 1610 aa28.69■■■□□ 2.18
TM9SF1-203ENST00000524835 ERCC6L2Q5T890 1561 aa28.67■■■□□ 2.18
TM9SF1-203ENST00000524835 ATP10BO94823 1461 aa28.67■■■□□ 2.18
TM9SF1-203ENST00000524835 KIF14Q15058 1648 aa28.62■■■□□ 2.17
TM9SF1-203ENST00000524835 HFM1A2PYH4 1435 aa28.62■■■□□ 2.17
TM9SF1-203ENST00000524835 UACAQ9BZF9 1416 aa28.59■■■□□ 2.17
TM9SF1-203ENST00000524835 MAPKBP1O60336 1514 aa28.55■■■□□ 2.16
TM9SF1-203ENST00000524835 ITSN2Q9NZM3 1697 aa28.55■■■□□ 2.16
TM9SF1-203ENST00000524835 NAIPQ13075 1403 aa28.53■■■□□ 2.16
TM9SF1-203ENST00000524835 GPATCH8Q9UKJ3 1502 aaKnown RBP28.53■■■□□ 2.16
TM9SF1-203ENST00000524835 PLEKHD1A6NEE1 506 aa28.52■■■□□ 2.16
TM9SF1-203ENST00000524835 ABCC2Q92887 1545 aa28.51■■■□□ 2.15
TM9SF1-203ENST00000524835 AKNAQ7Z591 1439 aa28.5■■■□□ 2.15
TM9SF1-203ENST00000524835 ABCC10Q5T3U5 1492 aa28.49■■■□□ 2.15
TM9SF1-203ENST00000524835 DNMT1P26358 1616 aaKnown RBP28.48■■■□□ 2.15
TM9SF1-203ENST00000524835 GCC2Q8IWJ2 1684 aa28.47■■■□□ 2.15
TM9SF1-203ENST00000524835 DAPK1P53355 1430 aa28.45■■■□□ 2.15
TM9SF1-203ENST00000524835 ZNF644Q9H582 1327 aaPredicted RBP28.44■■■□□ 2.14
TM9SF1-203ENST00000524835 CAMSAP2Q08AD1 1489 aa28.44■■■□□ 2.14
TM9SF1-203ENST00000524835 CDC42BPAQ5VT25 1732 aa28.43■■■□□ 2.14
TM9SF1-203ENST00000524835 ABCC5O15440 1437 aa28.43■■■□□ 2.14
TM9SF1-203ENST00000524835 CFDP1Q9UEE9 299 aaPredicted RBP28.42■■■□□ 2.14
TM9SF1-203ENST00000524835 UHRF1BP1LA0JNW5 1464 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms