RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 EEA1Q15075 1411 aa21.44■■□□□ 1.02
VEGFA-224ENST00000523873 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
VEGFA-224ENST00000523873 PRXQ9BXM0 1461 aa21.43■■□□□ 1.02
VEGFA-224ENST00000523873 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
VEGFA-224ENST00000523873 CTTNBP2Q8WZ74 1663 aa21.4■■□□□ 1.02
VEGFA-224ENST00000523873 KIAA0586Q9BVV6 1533 aa21.38■■□□□ 1.01
VEGFA-224ENST00000523873 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
VEGFA-224ENST00000523873 IQGAP2Q13576 1575 aa21.34■■□□□ 1.01
VEGFA-224ENST00000523873 JPH4Q96JJ6 628 aa21.32■■□□□ 1
VEGFA-224ENST00000523873 KIF21BO75037 1637 aa21.32■■□□□ 1
VEGFA-224ENST00000523873 PRG4Q92954 1404 aaPredicted RBP21.31■■□□□ 1
VEGFA-224ENST00000523873 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
VEGFA-224ENST00000523873 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
VEGFA-224ENST00000523873 UGGT2Q9NYU1 1516 aa21.19■□□□□ 0.98
VEGFA-224ENST00000523873 DISP1Q96F81 1524 aa21.17■□□□□ 0.98
VEGFA-224ENST00000523873 KIAA0556O60303 1618 aa21.16■□□□□ 0.98
VEGFA-224ENST00000523873 GOLGA3Q08378 1498 aa21.16■□□□□ 0.98
VEGFA-224ENST00000523873 CARMIL2Q6F5E8 1435 aa21.12■□□□□ 0.97
VEGFA-224ENST00000523873 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-224ENST00000523873 RANGAP1P46060 587 aaPredicted RBP21.09■□□□□ 0.97
VEGFA-224ENST00000523873 UBTFP17480 764 aaKnown RBP21.08■□□□□ 0.97
VEGFA-224ENST00000523873 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
VEGFA-224ENST00000523873 SAMD9Q5K651 1589 aa21.06■□□□□ 0.96
VEGFA-224ENST00000523873 PTPRGP23470 1445 aa21.04■□□□□ 0.96
VEGFA-224ENST00000523873 ADCY10Q96PN6 1610 aa21.04■□□□□ 0.96
VEGFA-224ENST00000523873 P3H3Q8IVL6 736 aa21.03■□□□□ 0.96
VEGFA-224ENST00000523873 FHOD3Q2V2M9 1422 aa20.94■□□□□ 0.94
VEGFA-224ENST00000523873 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
VEGFA-224ENST00000523873 UACAQ9BZF9 1416 aa20.92■□□□□ 0.94
VEGFA-224ENST00000523873 PLB1Q6P1J6 1458 aa20.92■□□□□ 0.94
VEGFA-224ENST00000523873 ABCC2Q92887 1545 aa20.91■□□□□ 0.94
VEGFA-224ENST00000523873 ABCA8O94911 1581 aa20.9■□□□□ 0.94
VEGFA-224ENST00000523873 ARHGAP35Q9NRY4 1499 aa20.89■□□□□ 0.94
VEGFA-224ENST00000523873 UHRF1BP1LA0JNW5 1464 aa20.88■□□□□ 0.93
VEGFA-224ENST00000523873 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
VEGFA-224ENST00000523873 ZCCHC11Q5TAX3 1644 aaKnown RBP20.86■□□□□ 0.93
VEGFA-224ENST00000523873 RAPGEF6Q8TEU7 1601 aa20.85■□□□□ 0.93
VEGFA-224ENST00000523873 NPM1P06748 294 aaKnown RBP eCLIP20.82■□□□□ 0.92
VEGFA-224ENST00000523873 KIF13AQ9H1H9 1805 aa20.82■□□□□ 0.92
VEGFA-224ENST00000523873 MAPKBP1O60336 1514 aa20.8■□□□□ 0.92
VEGFA-224ENST00000523873 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-224ENST00000523873 KDM5BQ9UGL1 1544 aa20.79■□□□□ 0.92
VEGFA-224ENST00000523873 CLIP1P30622 1438 aa20.78■□□□□ 0.92
VEGFA-224ENST00000523873 ARID3CA6NKF2 412 aa20.78■□□□□ 0.92
VEGFA-224ENST00000523873 CEP162Q5TB80 1403 aa20.73■□□□□ 0.91
VEGFA-224ENST00000523873 NUP153P49790 1475 aaKnown RBP20.73■□□□□ 0.91
VEGFA-224ENST00000523873 LRRIQ1Q96JM4 1722 aa20.73■□□□□ 0.91
VEGFA-224ENST00000523873 DIP2BQ9P265 1576 aa20.72■□□□□ 0.91
VEGFA-224ENST00000523873 ASXL2Q76L83 1435 aa20.72■□□□□ 0.91
VEGFA-224ENST00000523873 ATP10BO94823 1461 aa20.7■□□□□ 0.9
VEGFA-224ENST00000523873 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
VEGFA-224ENST00000523873 PCF11O94913 1555 aaKnown RBP20.69■□□□□ 0.9
VEGFA-224ENST00000523873 TSPOAP1O95153 1857 aa20.69■□□□□ 0.9
VEGFA-224ENST00000523873 HECW1Q76N89 1606 aa20.68■□□□□ 0.9
VEGFA-224ENST00000523873 ABCC10Q5T3U5 1492 aa20.68■□□□□ 0.9
VEGFA-224ENST00000523873 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
VEGFA-224ENST00000523873 ATP1B4Q9UN42 357 aaPredicted RBP20.65■□□□□ 0.9
VEGFA-224ENST00000523873 WDR7Q9Y4E6 1490 aa20.63■□□□□ 0.89
VEGFA-224ENST00000523873 FAM69CQ0P6D2 419 aa20.63■□□□□ 0.89
VEGFA-224ENST00000523873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-224ENST00000523873 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
VEGFA-224ENST00000523873 EPRSP07814 1512 aaKnown RBP20.61■□□□□ 0.89
VEGFA-224ENST00000523873 CASKIN1Q8WXD9 1431 aa20.59■□□□□ 0.89
VEGFA-224ENST00000523873 GLI2P10070 1586 aa20.59■□□□□ 0.89
VEGFA-224ENST00000523873 KCNH8Q96L42 1107 aa20.56■□□□□ 0.88
VEGFA-224ENST00000523873 PPRC1Q5VV67 1664 aaKnown RBP20.56■□□□□ 0.88
VEGFA-224ENST00000523873 MAP3K4Q9Y6R4 1608 aa20.56■□□□□ 0.88
VEGFA-224ENST00000523873 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
VEGFA-224ENST00000523873 CFAP43Q8NDM7 1665 aa20.52■□□□□ 0.88
VEGFA-224ENST00000523873 CCDC18Q5T9S5 1454 aa20.49■□□□□ 0.87
VEGFA-224ENST00000523873 PLEKHD1A6NEE1 506 aa20.48■□□□□ 0.87
VEGFA-224ENST00000523873 ABCA9Q8IUA7 1624 aa20.48■□□□□ 0.87
VEGFA-224ENST00000523873 MAGI3Q5TCQ9 1506 aa20.46■□□□□ 0.87
VEGFA-224ENST00000523873 KIF14Q15058 1648 aa20.45■□□□□ 0.87
VEGFA-224ENST00000523873 VPS8Q8N3P4 1428 aa20.45■□□□□ 0.86
VEGFA-224ENST00000523873 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
VEGFA-224ENST00000523873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.43■□□□□ 0.862e-6■■□□□ 12.9
VEGFA-224ENST00000523873 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
VEGFA-224ENST00000523873 TROQ12816 1431 aaPredicted RBP20.4■□□□□ 0.86
VEGFA-224ENST00000523873 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
VEGFA-224ENST00000523873 MYO5CQ9NQX4 1742 aa20.37■□□□□ 0.85
VEGFA-224ENST00000523873 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
VEGFA-224ENST00000523873 KDM6BO15054 1643 aa20.35■□□□□ 0.85
VEGFA-224ENST00000523873 TEX14Q8IWB6 1497 aa20.35■□□□□ 0.85
VEGFA-224ENST00000523873 CDC42BPAQ5VT25 1732 aa20.31■□□□□ 0.84
VEGFA-224ENST00000523873 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
VEGFA-224ENST00000523873 EHBP1L1Q8N3D4 1523 aa20.3■□□□□ 0.84
VEGFA-224ENST00000523873 MTUS2Q5JR59 1369 aa20.29■□□□□ 0.84
VEGFA-224ENST00000523873 COL17A1Q9UMD9 1497 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-224ENST00000523873 PREX2Q70Z35 1606 aa20.27■□□□□ 0.83
VEGFA-224ENST00000523873 SUPT6HQ7KZ85 1726 aaKnown RBP20.25■□□□□ 0.83
VEGFA-224ENST00000523873 CFAP74Q9C0B2 1584 aa20.25■□□□□ 0.83
VEGFA-224ENST00000523873 PLCH2O75038 1416 aa20.24■□□□□ 0.83
VEGFA-224ENST00000523873 FANCAO15360 1455 aa20.24■□□□□ 0.83
VEGFA-224ENST00000523873 MAP3K1Q13233 1512 aa20.23■□□□□ 0.83
VEGFA-224ENST00000523873 LRRC9Q6ZRR7 1453 aa20.23■□□□□ 0.83
VEGFA-224ENST00000523873 NEO1Q92859 1461 aa20.23■□□□□ 0.83
VEGFA-224ENST00000523873 KANK4Q5T7N3 995 aaPredicted RBP20.22■□□□□ 0.83
VEGFA-224ENST00000523873 ARHGAP5Q13017 1502 aa20.22■□□□□ 0.83
VEGFA-224ENST00000523873 ARAP3Q8WWN8 1544 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms