RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
SDCBP-211ENST00000523441 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
SDCBP-211ENST00000523441 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
SDCBP-211ENST00000523441 RUSC2Q8N2Y8 1516 aa20.92■□□□□ 0.94
SDCBP-211ENST00000523441 ABCC10Q5T3U5 1492 aa20.91■□□□□ 0.94
SDCBP-211ENST00000523441 DIP2BQ9P265 1576 aa20.91■□□□□ 0.94
SDCBP-211ENST00000523441 KDM6BO15054 1643 aa20.9■□□□□ 0.94
SDCBP-211ENST00000523441 TTBK1Q5TCY1 1321 aaPredicted RBP20.9■□□□□ 0.94
SDCBP-211ENST00000523441 ADCY10Q96PN6 1610 aa20.89■□□□□ 0.94
SDCBP-211ENST00000523441 KDM4FA0A1W2PPD8 638 aa20.85■□□□□ 0.93
SDCBP-211ENST00000523441 MAPKBP1O60336 1514 aa20.84■□□□□ 0.93
SDCBP-211ENST00000523441 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
SDCBP-211ENST00000523441 ILDR1Q86SU0 546 aaPredicted RBP20.74■□□□□ 0.91
SDCBP-211ENST00000523441 KIAA0586Q9BVV6 1533 aa20.69■□□□□ 0.9
SDCBP-211ENST00000523441 CUL7Q14999 1698 aa20.65■□□□□ 0.9
SDCBP-211ENST00000523441 PTPRGP23470 1445 aa20.65■□□□□ 0.9
SDCBP-211ENST00000523441 IGF1RP08069 1367 aa20.61■□□□□ 0.89
SDCBP-211ENST00000523441 PPRC1Q5VV67 1664 aaKnown RBP20.61■□□□□ 0.89
SDCBP-211ENST00000523441 ADGRL1O94910 1474 aa20.61■□□□□ 0.89
SDCBP-211ENST00000523441 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
SDCBP-211ENST00000523441 ASXL2Q76L83 1435 aa20.59■□□□□ 0.89
SDCBP-211ENST00000523441 ABCC2Q92887 1545 aa20.57■□□□□ 0.88
SDCBP-211ENST00000523441 CARMIL2Q6F5E8 1435 aa20.55■□□□□ 0.88
SDCBP-211ENST00000523441 TNIKQ9UKE5 1360 aa20.54■□□□□ 0.88
SDCBP-211ENST00000523441 PLB1Q6P1J6 1458 aa20.52■□□□□ 0.88
SDCBP-211ENST00000523441 IQGAP2Q13576 1575 aa20.51■□□□□ 0.87
SDCBP-211ENST00000523441 CARMIL1Q5VZK9 1371 aa20.51■□□□□ 0.87
SDCBP-211ENST00000523441 GLI2P10070 1586 aa20.5■□□□□ 0.87
SDCBP-211ENST00000523441 HECW2Q9P2P5 1572 aa20.49■□□□□ 0.87
SDCBP-211ENST00000523441 COL17A1Q9UMD9 1497 aaPredicted RBP20.48■□□□□ 0.87
SDCBP-211ENST00000523441 UACAQ9BZF9 1416 aa20.45■□□□□ 0.86
SDCBP-211ENST00000523441 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.86
SDCBP-211ENST00000523441 MAP3K4Q9Y6R4 1608 aa20.45■□□□□ 0.86
SDCBP-211ENST00000523441 EPRSP07814 1512 aaKnown RBP20.43■□□□□ 0.86
SDCBP-211ENST00000523441 UHRF1BP1LA0JNW5 1464 aa20.42■□□□□ 0.86
SDCBP-211ENST00000523441 DISP1Q96F81 1524 aa20.41■□□□□ 0.86
SDCBP-211ENST00000523441 TEX14Q8IWB6 1497 aa20.39■□□□□ 0.85
SDCBP-211ENST00000523441 KDM5BQ9UGL1 1544 aa20.36■□□□□ 0.85
SDCBP-211ENST00000523441 KCNH8Q96L42 1107 aa20.34■□□□□ 0.85
SDCBP-211ENST00000523441 KIAA0556O60303 1618 aa20.33■□□□□ 0.84
SDCBP-211ENST00000523441 KIF21BO75037 1637 aa20.29■□□□□ 0.84
SDCBP-211ENST00000523441 WDR7Q9Y4E6 1490 aa20.29■□□□□ 0.84
SDCBP-211ENST00000523441 UGGT2Q9NYU1 1516 aa20.28■□□□□ 0.84
SDCBP-211ENST00000523441 RAPGEF2Q9Y4G8 1499 aa20.26■□□□□ 0.83
SDCBP-211ENST00000523441 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
SDCBP-211ENST00000523441 CFAP43Q8NDM7 1665 aa20.24■□□□□ 0.83
SDCBP-211ENST00000523441 CD109Q6YHK3 1445 aa20.24■□□□□ 0.83
SDCBP-211ENST00000523441 CTTNBP2Q8WZ74 1663 aa20.23■□□□□ 0.83
SDCBP-211ENST00000523441 MAGI3Q5TCQ9 1506 aa20.16■□□□□ 0.82
SDCBP-211ENST00000523441 ABCA8O94911 1581 aa20.13■□□□□ 0.81
SDCBP-211ENST00000523441 P3H3Q8IVL6 736 aa20.11■□□□□ 0.81
SDCBP-211ENST00000523441 FBXO41Q8TF61 875 aa20.1■□□□□ 0.81
SDCBP-211ENST00000523441 GOLGA3Q08378 1498 aa20.1■□□□□ 0.81
SDCBP-211ENST00000523441 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
SDCBP-211ENST00000523441 ARID4BQ4LE39 1312 aaPredicted RBP20.05■□□□□ 0.8
SDCBP-211ENST00000523441 RAPGEF3O95398 923 aa20.04■□□□□ 0.8
SDCBP-211ENST00000523441 PTPRMP28827 1452 aa20.04■□□□□ 0.8
SDCBP-211ENST00000523441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.8
SDCBP-211ENST00000523441 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
SDCBP-211ENST00000523441 ADAMTSL3P82987 1691 aa20.02■□□□□ 0.8
SDCBP-211ENST00000523441 ARAP3Q8WWN8 1544 aa20.02■□□□□ 0.79
SDCBP-211ENST00000523441 MADDQ8WXG6 1647 aa20■□□□□ 0.79
SDCBP-211ENST00000523441 FAM9AQ8IZU1 332 aaPredicted RBP19.99■□□□□ 0.79
SDCBP-211ENST00000523441 ATP10BO94823 1461 aa19.98■□□□□ 0.79
SDCBP-211ENST00000523441 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
SDCBP-211ENST00000523441 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
SDCBP-211ENST00000523441 ABCA9Q8IUA7 1624 aa19.96■□□□□ 0.79
SDCBP-211ENST00000523441 RIMS1Q86UR5 1692 aaKnown RBP19.96■□□□□ 0.79
SDCBP-211ENST00000523441 PCF11O94913 1555 aaKnown RBP19.93■□□□□ 0.78
SDCBP-211ENST00000523441 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
SDCBP-211ENST00000523441 HSPA2P54652 639 aa19.91■□□□□ 0.78
SDCBP-211ENST00000523441 RAPGEF6Q8TEU7 1601 aa19.9■□□□□ 0.78
SDCBP-211ENST00000523441 LMTK3Q96Q04 1460 aa19.89■□□□□ 0.77
SDCBP-211ENST00000523441 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
SDCBP-211ENST00000523441 NEO1Q92859 1461 aa19.86■□□□□ 0.77
SDCBP-211ENST00000523441 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
SDCBP-211ENST00000523441 MLECQ14165 292 aa19.84■□□□□ 0.77
SDCBP-211ENST00000523441 ARHGEF40Q8TER5 1519 aa19.82■□□□□ 0.76
SDCBP-211ENST00000523441 SAMD9Q5K651 1589 aa19.81■□□□□ 0.76
SDCBP-211ENST00000523441 RICTORQ6R327 1708 aa19.81■□□□□ 0.76
SDCBP-211ENST00000523441 DENND4BO75064 1496 aaPredicted RBP19.79■□□□□ 0.76
SDCBP-211ENST00000523441 SIGLEC1Q9BZZ2 1709 aa19.78■□□□□ 0.76
SDCBP-211ENST00000523441 NUP153P49790 1475 aaKnown RBP19.77■□□□□ 0.76
SDCBP-211ENST00000523441 FHOD3Q2V2M9 1422 aa19.76■□□□□ 0.75
SDCBP-211ENST00000523441 AKNAQ7Z591 1439 aa19.76■□□□□ 0.75
SDCBP-211ENST00000523441 FER1L4A9Z1Z3 1794 aa19.75■□□□□ 0.75
SDCBP-211ENST00000523441 PLEKHD1A6NEE1 506 aa19.74■□□□□ 0.75
SDCBP-211ENST00000523441 FANCAO15360 1455 aa19.73■□□□□ 0.75
SDCBP-211ENST00000523441 CERKQ8TCT0 537 aa19.73■□□□□ 0.75
SDCBP-211ENST00000523441 TTC37Q6PGP7 1564 aa19.73■□□□□ 0.75
SDCBP-211ENST00000523441 CFAP74Q9C0B2 1584 aa19.73■□□□□ 0.75
SDCBP-211ENST00000523441 ZFYVE16Q7Z3T8 1539 aa19.72■□□□□ 0.75
SDCBP-211ENST00000523441 POGZQ7Z3K3 1410 aa19.72■□□□□ 0.75
SDCBP-211ENST00000523441 YEATS2Q9ULM3 1422 aa19.72■□□□□ 0.75
SDCBP-211ENST00000523441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.71■□□□□ 0.75
SDCBP-211ENST00000523441 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
SDCBP-211ENST00000523441 EFCAB5A4FU69 1503 aa19.67■□□□□ 0.74
SDCBP-211ENST00000523441 HECW1Q76N89 1606 aa19.67■□□□□ 0.74
SDCBP-211ENST00000523441 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
SDCBP-211ENST00000523441 ATP1B4Q9UN42 357 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms