RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 ARAP1Q96P48 1450 aa10.2□□□□□ -0.78
SHPRH-210ENST00000523276 LAMC3Q9Y6N6 1575 aa10.2□□□□□ -0.78
SHPRH-210ENST00000523276 RANGAP1P46060 587 aaPredicted RBP10.19□□□□□ -0.78
SHPRH-210ENST00000523276 TOPBP1Q92547 1522 aa10.19□□□□□ -0.78
SHPRH-210ENST00000523276 CARMIL1Q5VZK9 1371 aa10.17□□□□□ -0.78
SHPRH-210ENST00000523276 ABCA10Q8WWZ4 1543 aa10.17□□□□□ -0.78
SHPRH-210ENST00000523276 APLP2Q06481 763 aa10.17□□□□□ -0.78
SHPRH-210ENST00000523276 POLA1P09884 1462 aaPredicted RBP10.17□□□□□ -0.78
SHPRH-210ENST00000523276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.16□□□□□ -0.78
SHPRH-210ENST00000523276 RNF39Q9H2S5 420 aa10.16□□□□□ -0.78
SHPRH-210ENST00000523276 RAD54L2Q9Y4B4 1467 aa10.15□□□□□ -0.78
SHPRH-210ENST00000523276 ARHGAP35Q9NRY4 1499 aa10.14□□□□□ -0.79
SHPRH-210ENST00000523276 CCER1Q8TC90 406 aaPredicted RBP10.14□□□□□ -0.79
SHPRH-210ENST00000523276 PDS5BQ9NTI5 1447 aa10.14□□□□□ -0.79
SHPRH-210ENST00000523276 URB2Q14146 1524 aaKnown RBP10.14□□□□□ -0.79
SHPRH-210ENST00000523276 WDR97A6NE52 1622 aa10.08□□□□□ -0.8
SHPRH-210ENST00000523276 CUL7Q14999 1698 aa10.07□□□□□ -0.8
SHPRH-210ENST00000523276 SLC4A2P04920 1241 aa10.07□□□□□ -0.8
SHPRH-210ENST00000523276 KANK4Q5T7N3 995 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-210ENST00000523276 KIF21AQ7Z4S6 1674 aa10.05□□□□□ -0.8
SHPRH-210ENST00000523276 HNRNPUL2Q1KMD3 747 aaKnown RBP10.05□□□□□ -0.8
SHPRH-210ENST00000523276 ABCA5Q8WWZ7 1642 aa10.05□□□□□ -0.8
SHPRH-210ENST00000523276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.04□□□□□ -0.81e-6■■□□□ 12.1
SHPRH-210ENST00000523276 MAP3K1Q13233 1512 aa10.04□□□□□ -0.8
SHPRH-210ENST00000523276 GAPVD1Q14C86 1478 aa10.03□□□□□ -0.8
SHPRH-210ENST00000523276 TDRD9Q8NDG6 1382 aaKnown RBP10.02□□□□□ -0.8
SHPRH-210ENST00000523276 FHAD1B1AJZ9 1412 aa10.02□□□□□ -0.81
SHPRH-210ENST00000523276 RRBP1Q9P2E9 1410 aaKnown RBP10.02□□□□□ -0.81
SHPRH-210ENST00000523276 EFCAB5A4FU69 1503 aa10.02□□□□□ -0.81
SHPRH-210ENST00000523276 TIAM1Q13009 1591 aa10.01□□□□□ -0.81
SHPRH-210ENST00000523276 TARBP1Q13395 1621 aaKnown RBP10□□□□□ -0.81
SHPRH-210ENST00000523276 MRC2Q9UBG0 1479 aa10□□□□□ -0.81
SHPRH-210ENST00000523276 CTTNBP2Q8WZ74 1663 aa9.98□□□□□ -0.81
SHPRH-210ENST00000523276 FHOD3Q2V2M9 1422 aa9.98□□□□□ -0.81
SHPRH-210ENST00000523276 PCF11O94913 1555 aaKnown RBP9.97□□□□□ -0.81
SHPRH-210ENST00000523276 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-210ENST00000523276 CCNB3Q8WWL7 1395 aa9.97□□□□□ -0.81
SHPRH-210ENST00000523276 LRRC9Q6ZRR7 1453 aa9.97□□□□□ -0.81
SHPRH-210ENST00000523276 C1QBPQ07021 282 aaKnown RBP9.97□□□□□ -0.81
SHPRH-210ENST00000523276 AQRO60306 1485 aaKnown RBP eCLIP9.97□□□□□ -0.815e-10■■■■■ 39.2
SHPRH-210ENST00000523276 FYCO1Q9BQS8 1478 aa9.97□□□□□ -0.81
SHPRH-210ENST00000523276 P3H3Q8IVL6 736 aa9.96□□□□□ -0.81
SHPRH-210ENST00000523276 CFAP43Q8NDM7 1665 aa9.95□□□□□ -0.82
SHPRH-210ENST00000523276 CASKIN1Q8WXD9 1431 aa9.95□□□□□ -0.82
SHPRH-210ENST00000523276 FMN1Q68DA7 1419 aa9.94□□□□□ -0.82
SHPRH-210ENST00000523276 CACNB1Q02641 598 aaPredicted RBP9.94□□□□□ -0.82
SHPRH-210ENST00000523276 SAMD9Q5K651 1589 aa9.93□□□□□ -0.82
SHPRH-210ENST00000523276 WDR62O43379 1518 aa9.93□□□□□ -0.82
SHPRH-210ENST00000523276 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
SHPRH-210ENST00000523276 IFT140Q96RY7 1462 aa9.92□□□□□ -0.82
SHPRH-210ENST00000523276 PBRM1Q86U86 1689 aa9.91□□□□□ -0.82
SHPRH-210ENST00000523276 ADAMTS12P58397 1594 aa9.91□□□□□ -0.82
SHPRH-210ENST00000523276 PHLDB1Q86UU1 1377 aa9.91□□□□□ -0.82
SHPRH-210ENST00000523276 CLSPNQ9HAW4 1339 aa9.91□□□□□ -0.82
SHPRH-210ENST00000523276 GRIN2BQ13224 1484 aa9.91□□□□□ -0.82
SHPRH-210ENST00000523276 DHX57Q6P158 1386 aaKnown RBP9.9□□□□□ -0.82
SHPRH-210ENST00000523276 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
SHPRH-210ENST00000523276 ZNF608Q9ULD9 1512 aaPredicted RBP9.86□□□□□ -0.83
SHPRH-210ENST00000523276 THOC2Q8NI27 1593 aaKnown RBP9.86□□□□□ -0.83
SHPRH-210ENST00000523276 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
SHPRH-210ENST00000523276 ZNF316A6NFI3 1004 aaPredicted RBP9.85□□□□□ -0.83
SHPRH-210ENST00000523276 ITGAEP38570 1179 aa9.85□□□□□ -0.83
SHPRH-210ENST00000523276 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
SHPRH-210ENST00000523276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.84□□□□□ -0.83
SHPRH-210ENST00000523276 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
SHPRH-210ENST00000523276 DIEXFQ68CQ4 756 aaKnown RBP9.83□□□□□ -0.84
SHPRH-210ENST00000523276 RAB3GAP2Q9H2M9 1393 aa9.83□□□□□ -0.84
SHPRH-210ENST00000523276 FAM50AQ14320 339 aaKnown RBP9.82□□□□□ -0.84
SHPRH-210ENST00000523276 MTUS2Q5JR59 1369 aa9.82□□□□□ -0.84
SHPRH-210ENST00000523276 SETD5Q9C0A6 1442 aa9.82□□□□□ -0.84
SHPRH-210ENST00000523276 UGGT2Q9NYU1 1516 aa9.82□□□□□ -0.84
SHPRH-210ENST00000523276 EIF4G3O43432 1585 aaKnown RBP9.82□□□□□ -0.84
SHPRH-210ENST00000523276 FGD6Q6ZV73 1430 aa9.81□□□□□ -0.84
SHPRH-210ENST00000523276 CCDC18Q5T9S5 1454 aa9.81□□□□□ -0.84
SHPRH-210ENST00000523276 EHBP1L1Q8N3D4 1523 aa9.8□□□□□ -0.84
SHPRH-210ENST00000523276 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
SHPRH-210ENST00000523276 KIAA0586Q9BVV6 1533 aa9.8□□□□□ -0.84
SHPRH-210ENST00000523276 GRIN2AQ12879 1464 aa9.79□□□□□ -0.84
SHPRH-210ENST00000523276 NCOA2Q15596 1464 aa9.79□□□□□ -0.84
SHPRH-210ENST00000523276 FKBP8Q14318 412 aa9.79□□□□□ -0.84
SHPRH-210ENST00000523276 HECW1Q76N89 1606 aa9.79□□□□□ -0.84
SHPRH-210ENST00000523276 MAGI1Q96QZ7 1491 aaPredicted RBP9.78□□□□□ -0.84
SHPRH-210ENST00000523276 MYOM3Q5VTT5 1437 aa9.77□□□□□ -0.84
SHPRH-210ENST00000523276 ARHGEF11O15085 1522 aa9.77□□□□□ -0.85
SHPRH-210ENST00000523276 MAPKBP1O60336 1514 aa9.76□□□□□ -0.85
SHPRH-210ENST00000523276 MAGI3Q5TCQ9 1506 aa9.76□□□□□ -0.85
SHPRH-210ENST00000523276 SUPT6HQ7KZ85 1726 aaKnown RBP9.76□□□□□ -0.85
SHPRH-210ENST00000523276 EPRSP07814 1512 aaKnown RBP9.76□□□□□ -0.85
SHPRH-210ENST00000523276 DISP1Q96F81 1524 aa9.76□□□□□ -0.85
SHPRH-210ENST00000523276 KIAA0556O60303 1618 aa9.75□□□□□ -0.85
SHPRH-210ENST00000523276 SYNJ2O15056 1496 aa9.75□□□□□ -0.85
SHPRH-210ENST00000523276 SPINK5Q9NQ38 1064 aaPredicted RBP9.75□□□□□ -0.85
SHPRH-210ENST00000523276 PRKCSHP14314 528 aaPredicted RBP9.74□□□□□ -0.85
SHPRH-210ENST00000523276 PTPRKQ15262 1439 aa9.72□□□□□ -0.85
SHPRH-210ENST00000523276 CDK13Q14004 1512 aaKnown RBP9.72□□□□□ -0.85
SHPRH-210ENST00000523276 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
SHPRH-210ENST00000523276 MYCNP04198 464 aaPredicted RBP9.72□□□□□ -0.85
SHPRH-210ENST00000523276 TCOF1Q13428 1488 aaKnown RBP9.71□□□□□ -0.85
SHPRH-210ENST00000523276 CEP170Q5SW79 1584 aa9.71□□□□□ -0.85
SHPRH-210ENST00000523276 PTPN23Q9H3S7 1636 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms