RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 QKIQ96PU8 341 aaKnown RBP eCLIP6.91□□□□□ -1.32e-37■■■■■ 280.4
SHPRH-210ENST00000523276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.47□□□□□ -1.214e-15■■■■□ 24.5
SHPRH-210ENST00000523276 AQRO60306 1485 aaKnown RBP eCLIP9.97□□□□□ -0.815e-10■■■■■ 39.2
SHPRH-210ENST00000523276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.17□□□□□ -1.265e-9■■■■■ 51.3
SHPRH-210ENST00000523276 U2AF2P26368 475 aaKnown RBP eCLIP7.72□□□□□ -1.172e-8■■■■□ 22.6
SHPRH-210ENST00000523276 PPIGQ13427 754 aaKnown RBP eCLIP6.52□□□□□ -1.373e-8■■■□□ 18.4
SHPRH-210ENST00000523276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.2□□□□□ -1.12e-7■■■□□ 16.8
SHPRH-210ENST00000523276 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.87□□□□□ -1.155e-7■■■■□ 19.8
SHPRH-210ENST00000523276 EIF3HO15372 352 aaKnown RBP eCLIP7.08□□□□□ -1.287e-7■■■□□ 18.3
SHPRH-210ENST00000523276 ZNF622Q969S3 477 aaKnown RBP eCLIP7.52□□□□□ -1.21e-6■□□□□ 10.8
SHPRH-210ENST00000523276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.04□□□□□ -0.81e-6■■□□□ 12.1
SHPRH-210ENST00000523276 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.19□□□□□ -1.263e-6■■■□□ 17.1
SHPRH-210ENST00000523276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5□□□□□ -1.611e-5■■■■□ 21.5
Retrieved 13 of 13 RNA–protein pairs in 16.7 ms