RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PRXQ9BXM0 1461 aa16.08■□□□□ 0.16
CLK4-209ENST00000521621 ARAP1Q96P48 1450 aa16.07■□□□□ 0.16
CLK4-209ENST00000521621 CTTNBP2Q8WZ74 1663 aa16.01■□□□□ 0.15
CLK4-209ENST00000521621 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
CLK4-209ENST00000521621 UGGT2Q9NYU1 1516 aa15.99■□□□□ 0.15
CLK4-209ENST00000521621 KIF21BO75037 1637 aa15.97■□□□□ 0.15
CLK4-209ENST00000521621 CHIC1Q5VXU3 224 aa15.96■□□□□ 0.15
CLK4-209ENST00000521621 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.15
CLK4-209ENST00000521621 PRG4Q92954 1404 aaPredicted RBP15.95■□□□□ 0.14
CLK4-209ENST00000521621 JPH4Q96JJ6 628 aa15.95■□□□□ 0.14
CLK4-209ENST00000521621 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
CLK4-209ENST00000521621 CARMIL2Q6F5E8 1435 aa15.89■□□□□ 0.13
CLK4-209ENST00000521621 DISP1Q96F81 1524 aa15.88■□□□□ 0.13
CLK4-209ENST00000521621 GOLGA3Q08378 1498 aa15.87■□□□□ 0.13
CLK4-209ENST00000521621 KIAA0556O60303 1618 aa15.87■□□□□ 0.13
CLK4-209ENST00000521621 UHRF1BP1LA0JNW5 1464 aa15.85■□□□□ 0.13
CLK4-209ENST00000521621 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
CLK4-209ENST00000521621 TNIKQ9UKE5 1360 aa15.84■□□□□ 0.13
CLK4-209ENST00000521621 SAMD9Q5K651 1589 aa15.83■□□□□ 0.12
CLK4-209ENST00000521621 ADCY10Q96PN6 1610 aa15.8■□□□□ 0.12
CLK4-209ENST00000521621 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
CLK4-209ENST00000521621 EFCAB5A4FU69 1503 aa15.77■□□□□ 0.11
CLK4-209ENST00000521621 PTPRGP23470 1445 aa15.77■□□□□ 0.11
CLK4-209ENST00000521621 ABCC2Q92887 1545 aa15.75■□□□□ 0.11
CLK4-209ENST00000521621 ABCA8O94911 1581 aa15.73■□□□□ 0.11
CLK4-209ENST00000521621 UACAQ9BZF9 1416 aa15.72■□□□□ 0.11
CLK4-209ENST00000521621 KDM5BQ9UGL1 1544 aa15.71■□□□□ 0.11
CLK4-209ENST00000521621 GLI2P10070 1586 aa15.65■□□□□ 0.1
CLK4-209ENST00000521621 KIF13AQ9H1H9 1805 aa15.65■□□□□ 0.1
CLK4-209ENST00000521621 ABCC10Q5T3U5 1492 aa15.64■□□□□ 0.09
CLK4-209ENST00000521621 ZCCHC11Q5TAX3 1644 aaKnown RBP15.63■□□□□ 0.09
CLK4-209ENST00000521621 DIP2BQ9P265 1576 aa15.63■□□□□ 0.09
CLK4-209ENST00000521621 PLB1Q6P1J6 1458 aa15.62■□□□□ 0.09
CLK4-209ENST00000521621 RAPGEF6Q8TEU7 1601 aa15.61■□□□□ 0.09
CLK4-209ENST00000521621 NPM1P06748 294 aaKnown RBP eCLIP15.59■□□□□ 0.09
CLK4-209ENST00000521621 FAM9AQ8IZU1 332 aaPredicted RBP15.58■□□□□ 0.08
CLK4-209ENST00000521621 ARHGAP35Q9NRY4 1499 aa15.56■□□□□ 0.08
CLK4-209ENST00000521621 ASXL2Q76L83 1435 aa15.54■□□□□ 0.08
CLK4-209ENST00000521621 FMN1Q68DA7 1419 aa15.53■□□□□ 0.08
CLK4-209ENST00000521621 MAP3K4Q9Y6R4 1608 aa15.53■□□□□ 0.08
CLK4-209ENST00000521621 WDR7Q9Y4E6 1490 aa15.52■□□□□ 0.08
CLK4-209ENST00000521621 EPRSP07814 1512 aaKnown RBP15.51■□□□□ 0.07
CLK4-209ENST00000521621 NUP153P49790 1475 aaKnown RBP15.51■□□□□ 0.07
CLK4-209ENST00000521621 FHOD3Q2V2M9 1422 aa15.5■□□□□ 0.07
CLK4-209ENST00000521621 ATP10BO94823 1461 aa15.5■□□□□ 0.07
CLK4-209ENST00000521621 CFAP43Q8NDM7 1665 aa15.5■□□□□ 0.07
CLK4-209ENST00000521621 HECW1Q76N89 1606 aa15.49■□□□□ 0.07
CLK4-209ENST00000521621 UBTFP17480 764 aaKnown RBP15.48■□□□□ 0.07
CLK4-209ENST00000521621 PPRC1Q5VV67 1664 aaKnown RBP15.47■□□□□ 0.07
CLK4-209ENST00000521621 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.06
CLK4-209ENST00000521621 ABCA9Q8IUA7 1624 aa15.44■□□□□ 0.06
CLK4-209ENST00000521621 MAGI3Q5TCQ9 1506 aa15.43■□□□□ 0.06
CLK4-209ENST00000521621 CASKIN1Q8WXD9 1431 aa15.42■□□□□ 0.06
CLK4-209ENST00000521621 CLIP1P30622 1438 aa15.41■□□□□ 0.06
CLK4-209ENST00000521621 FYCO1Q9BQS8 1478 aa15.41■□□□□ 0.06
CLK4-209ENST00000521621 TEX14Q8IWB6 1497 aa15.41■□□□□ 0.06
CLK4-209ENST00000521621 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
CLK4-209ENST00000521621 FAM69CQ0P6D2 419 aa15.4■□□□□ 0.06
CLK4-209ENST00000521621 P3H3Q8IVL6 736 aa15.39■□□□□ 0.05
CLK4-209ENST00000521621 LRRIQ1Q96JM4 1722 aa15.38■□□□□ 0.05
CLK4-209ENST00000521621 PCF11O94913 1555 aaKnown RBP15.37■□□□□ 0.05
CLK4-209ENST00000521621 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
CLK4-209ENST00000521621 ARAP3Q8WWN8 1544 aa15.35■□□□□ 0.05
CLK4-209ENST00000521621 TTBK1Q5TCY1 1321 aaPredicted RBP15.35■□□□□ 0.05
CLK4-209ENST00000521621 CEP162Q5TB80 1403 aa15.34■□□□□ 0.05
CLK4-209ENST00000521621 CFAP74Q9C0B2 1584 aa15.33■□□□□ 0.04
CLK4-209ENST00000521621 KDM6BO15054 1643 aa15.31■□□□□ 0.04
CLK4-209ENST00000521621 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
CLK4-209ENST00000521621 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
CLK4-209ENST00000521621 NEO1Q92859 1461 aa15.31■□□□□ 0.04
CLK4-209ENST00000521621 TSPOAP1O95153 1857 aa15.3■□□□□ 0.04
CLK4-209ENST00000521621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLK4-209ENST00000521621 TROQ12816 1431 aaPredicted RBP15.28■□□□□ 0.04
CLK4-209ENST00000521621 PLEKHD1A6NEE1 506 aa15.28■□□□□ 0.04
CLK4-209ENST00000521621 KIF14Q15058 1648 aa15.28■□□□□ 0.04
CLK4-209ENST00000521621 MAP3K1Q13233 1512 aa15.27■□□□□ 0.04
CLK4-209ENST00000521621 CDK11AQ9UQ88 783 aaPredicted RBP15.27■□□□□ 0.04
CLK4-209ENST00000521621 TTC37Q6PGP7 1564 aa15.25■□□□□ 0.03
CLK4-209ENST00000521621 MYO5CQ9NQX4 1742 aa15.24■□□□□ 0.03
CLK4-209ENST00000521621 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
CLK4-209ENST00000521621 VPS8Q8N3P4 1428 aa15.22■□□□□ 0.03
CLK4-209ENST00000521621 PLCH2O75038 1416 aa15.22■□□□□ 0.03
CLK4-209ENST00000521621 PREX2Q70Z35 1606 aa15.2■□□□□ 0.02
CLK4-209ENST00000521621 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
CLK4-209ENST00000521621 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
CLK4-209ENST00000521621 COL17A1Q9UMD9 1497 aaPredicted RBP15.18■□□□□ 0.02
CLK4-209ENST00000521621 KCNH8Q96L42 1107 aa15.18■□□□□ 0.02
CLK4-209ENST00000521621 ZMYM4Q5VZL5 1548 aa15.17■□□□□ 0.02
CLK4-209ENST00000521621 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
CLK4-209ENST00000521621 FRMPD1Q5SYB0 1578 aa15.16■□□□□ 0.02
CLK4-209ENST00000521621 RICTORQ6R327 1708 aa15.16■□□□□ 0.02
CLK4-209ENST00000521621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.16■□□□□ 0.02
CLK4-209ENST00000521621 HNRNPUL2Q1KMD3 747 aaKnown RBP15.16■□□□□ 0.02
CLK4-209ENST00000521621 FANCAO15360 1455 aa15.16■□□□□ 0.02
CLK4-209ENST00000521621 CDC42BPBQ9Y5S2 1711 aa15.15■□□□□ 0.02
CLK4-209ENST00000521621 CDC42BPAQ5VT25 1732 aa15.15■□□□□ 0.02
CLK4-209ENST00000521621 LOC105371045A0A1W2PR82 267 aa15.14■□□□□ 0.01
CLK4-209ENST00000521621 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
CLK4-209ENST00000521621 ARID3CA6NKF2 412 aa15.12■□□□□ 0.01
CLK4-209ENST00000521621 MAGI2Q86UL8 1455 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms