RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SNAPC4Q5SXM2 1469 aa28.17■■■□□ 2.1
SDC2-202ENST00000518385 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
SDC2-202ENST00000518385 VPS8Q8N3P4 1428 aa28.06■■■□□ 2.08
SDC2-202ENST00000518385 SYNJ2O15056 1496 aa28.04■■■□□ 2.08
SDC2-202ENST00000518385 RANGAP1P46060 587 aaPredicted RBP28■■■□□ 2.07
SDC2-202ENST00000518385 CHMP7Q8WUX9 453 aaPredicted RBP28■■■□□ 2.07
SDC2-202ENST00000518385 CTTNBP2Q8WZ74 1663 aa28■■■□□ 2.07
SDC2-202ENST00000518385 GRIN2AQ12879 1464 aa27.99■■■□□ 2.07
SDC2-202ENST00000518385 FBLN2P98095 1184 aa27.92■■■□□ 2.06
SDC2-202ENST00000518385 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.05
SDC2-202ENST00000518385 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
SDC2-202ENST00000518385 KIAA0586Q9BVV6 1533 aa27.85■■■□□ 2.05
SDC2-202ENST00000518385 APLP2Q06481 763 aa27.84■■■□□ 2.05
SDC2-202ENST00000518385 NUP160Q12769 1436 aa27.83■■■□□ 2.05
SDC2-202ENST00000518385 IQGAP2Q13576 1575 aa27.82■■■□□ 2.04
SDC2-202ENST00000518385 CEP170Q5SW79 1584 aa27.81■■■□□ 2.04
SDC2-202ENST00000518385 EFCAB5A4FU69 1503 aa27.8■■■□□ 2.04
SDC2-202ENST00000518385 CHD1O14646 1710 aa27.76■■■□□ 2.03
SDC2-202ENST00000518385 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
SDC2-202ENST00000518385 UGGT2Q9NYU1 1516 aa27.72■■■□□ 2.03
SDC2-202ENST00000518385 P3H3Q8IVL6 736 aa27.71■■■□□ 2.03
SDC2-202ENST00000518385 FHOD3Q2V2M9 1422 aa27.66■■■□□ 2.02
SDC2-202ENST00000518385 JPH4Q96JJ6 628 aa27.64■■■□□ 2.01
SDC2-202ENST00000518385 MAP3K1Q13233 1512 aa27.6■■■□□ 2.01
SDC2-202ENST00000518385 DISP1Q96F81 1524 aa27.59■■■□□ 2.01
SDC2-202ENST00000518385 FMN1Q68DA7 1419 aa27.56■■■□□ 2
SDC2-202ENST00000518385 KIAA0556O60303 1618 aa27.53■■■□□ 2
SDC2-202ENST00000518385 TTBK1Q5TCY1 1321 aaPredicted RBP27.52■■■□□ 2
SDC2-202ENST00000518385 CARMIL2Q6F5E8 1435 aa27.5■■□□□ 1.99
SDC2-202ENST00000518385 CLASP1Q7Z460 1538 aa27.49■■□□□ 1.99
SDC2-202ENST00000518385 CASKIN1Q8WXD9 1431 aa27.48■■□□□ 1.99
SDC2-202ENST00000518385 SHROOM2Q13796 1616 aa27.46■■□□□ 1.99
SDC2-202ENST00000518385 PCF11O94913 1555 aaKnown RBP27.45■■□□□ 1.98
SDC2-202ENST00000518385 FYCO1Q9BQS8 1478 aa27.44■■□□□ 1.98
SDC2-202ENST00000518385 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
SDC2-202ENST00000518385 SCAF1Q9H7N4 1312 aaKnown RBP27.44■■□□□ 1.98
SDC2-202ENST00000518385 TIAM1Q13009 1591 aa27.41■■□□□ 1.98
SDC2-202ENST00000518385 CCER1Q8TC90 406 aaPredicted RBP27.41■■□□□ 1.98
SDC2-202ENST00000518385 OSCARQ8IYS5 282 aa27.4■■□□□ 1.98
SDC2-202ENST00000518385 KANK4Q5T7N3 995 aaPredicted RBP27.38■■□□□ 1.97
SDC2-202ENST00000518385 ATP1B4Q9UN42 357 aaPredicted RBP27.38■■□□□ 1.97
SDC2-202ENST00000518385 CFAP43Q8NDM7 1665 aa27.33■■□□□ 1.97
SDC2-202ENST00000518385 RRBP1Q9P2E9 1410 aaKnown RBP27.31■■□□□ 1.96
SDC2-202ENST00000518385 ACIN1Q9UKV3 1341 aaKnown RBP27.3■■□□□ 1.96
SDC2-202ENST00000518385 CENPBP07199 599 aaPredicted RBP27.3■■□□□ 1.96
SDC2-202ENST00000518385 LRRC9Q6ZRR7 1453 aa27.29■■□□□ 1.96
SDC2-202ENST00000518385 HECW1Q76N89 1606 aa27.27■■□□□ 1.96
SDC2-202ENST00000518385 PTPRGP23470 1445 aa27.26■■□□□ 1.95
SDC2-202ENST00000518385 ERCC6L2Q5T890 1561 aa27.26■■□□□ 1.95
SDC2-202ENST00000518385 RAPGEF6Q8TEU7 1601 aa27.24■■□□□ 1.95
SDC2-202ENST00000518385 LRRIQ1Q96JM4 1722 aa27.23■■□□□ 1.95
SDC2-202ENST00000518385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.22■■□□□ 1.95
SDC2-202ENST00000518385 CCDC18Q5T9S5 1454 aa27.21■■□□□ 1.95
SDC2-202ENST00000518385 PLB1Q6P1J6 1458 aa27.21■■□□□ 1.95
SDC2-202ENST00000518385 EPRSP07814 1512 aaKnown RBP27.19■■□□□ 1.94
SDC2-202ENST00000518385 ABCA8O94911 1581 aa27.19■■□□□ 1.94
SDC2-202ENST00000518385 NUP153P49790 1475 aaKnown RBP27.18■■□□□ 1.94
SDC2-202ENST00000518385 CCNB3Q8WWL7 1395 aa27.17■■□□□ 1.94
SDC2-202ENST00000518385 DIEXFQ68CQ4 756 aaKnown RBP27.16■■□□□ 1.94
SDC2-202ENST00000518385 HNRNPUL2Q1KMD3 747 aaKnown RBP27.14■■□□□ 1.94
SDC2-202ENST00000518385 MYT1Q01538 1121 aa27.12■■□□□ 1.93
SDC2-202ENST00000518385 CDK13Q14004 1512 aaKnown RBP27.11■■□□□ 1.93
SDC2-202ENST00000518385 UACAQ9BZF9 1416 aa27.1■■□□□ 1.93
SDC2-202ENST00000518385 MTUS2Q5JR59 1369 aa27.09■■□□□ 1.93
SDC2-202ENST00000518385 ARID3CA6NKF2 412 aa27.08■■□□□ 1.93
SDC2-202ENST00000518385 MAGI3Q5TCQ9 1506 aa27.03■■□□□ 1.92
SDC2-202ENST00000518385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.03■■□□□ 1.92
SDC2-202ENST00000518385 CDK11AQ9UQ88 783 aaPredicted RBP27.03■■□□□ 1.92
SDC2-202ENST00000518385 EHBP1L1Q8N3D4 1523 aa27.03■■□□□ 1.92
SDC2-202ENST00000518385 ATP10BO94823 1461 aa27.02■■□□□ 1.92
SDC2-202ENST00000518385 PHLDB1Q86UU1 1377 aa27.01■■□□□ 1.91
SDC2-202ENST00000518385 ABCC2Q92887 1545 aa26.99■■□□□ 1.91
SDC2-202ENST00000518385 UHRF1BP1LA0JNW5 1464 aa26.99■■□□□ 1.91
SDC2-202ENST00000518385 ZNF316A6NFI3 1004 aaPredicted RBP26.98■■□□□ 1.91
SDC2-202ENST00000518385 NEUROD1Q13562 356 aa26.97■■□□□ 1.91
SDC2-202ENST00000518385 SUPT6HQ7KZ85 1726 aaKnown RBP26.94■■□□□ 1.9
SDC2-202ENST00000518385 CLSPNQ9HAW4 1339 aa26.92■■□□□ 1.9
SDC2-202ENST00000518385 NCOA2Q15596 1464 aa26.92■■□□□ 1.9
SDC2-202ENST00000518385 PLEKHD1A6NEE1 506 aa26.91■■□□□ 1.9
SDC2-202ENST00000518385 TROQ12816 1431 aaPredicted RBP26.91■■□□□ 1.9
SDC2-202ENST00000518385 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
SDC2-202ENST00000518385 KDM5BQ9UGL1 1544 aa26.86■■□□□ 1.89
SDC2-202ENST00000518385 FGD6Q6ZV73 1430 aa26.84■■□□□ 1.89
SDC2-202ENST00000518385 ADCY10Q96PN6 1610 aa26.84■■□□□ 1.89
SDC2-202ENST00000518385 MYOM3Q5VTT5 1437 aa26.81■■□□□ 1.88
SDC2-202ENST00000518385 ZCCHC11Q5TAX3 1644 aaKnown RBP26.8■■□□□ 1.88
SDC2-202ENST00000518385 GTF3C3Q9Y5Q9 886 aa26.79■■□□□ 1.88
SDC2-202ENST00000518385 FAM50AQ14320 339 aaKnown RBP26.78■■□□□ 1.88
SDC2-202ENST00000518385 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
SDC2-202ENST00000518385 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
SDC2-202ENST00000518385 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
SDC2-202ENST00000518385 SETD5Q9C0A6 1442 aa26.75■■□□□ 1.87
SDC2-202ENST00000518385 DHX57Q6P158 1386 aaKnown RBP26.75■■□□□ 1.87
SDC2-202ENST00000518385 KIF14Q15058 1648 aa26.73■■□□□ 1.87
SDC2-202ENST00000518385 MIA2Q96PC5 1412 aa26.71■■□□□ 1.87
SDC2-202ENST00000518385 ITGAEP38570 1179 aa26.71■■□□□ 1.87
SDC2-202ENST00000518385 ABCC10Q5T3U5 1492 aa26.69■■□□□ 1.86
SDC2-202ENST00000518385 TCOF1Q13428 1488 aaKnown RBP26.67■■□□□ 1.86
SDC2-202ENST00000518385 NPM1P06748 294 aaKnown RBP eCLIP26.67■■□□□ 1.86
SDC2-202ENST00000518385 RAB3GAP2Q9H2M9 1393 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms