RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 IGF1RP08069 1367 aa18.72■□□□□ 0.59
FAM3B-206ENST00000518236 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
FAM3B-206ENST00000518236 ERCC6L2Q5T890 1561 aa18.68■□□□□ 0.58
FAM3B-206ENST00000518236 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
FAM3B-206ENST00000518236 JPH4Q96JJ6 628 aa18.62■□□□□ 0.57
FAM3B-206ENST00000518236 PIAS4Q8N2W9 510 aaPredicted RBP18.59■□□□□ 0.57
FAM3B-206ENST00000518236 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
FAM3B-206ENST00000518236 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
FAM3B-206ENST00000518236 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
FAM3B-206ENST00000518236 RUSC2Q8N2Y8 1516 aa18.55■□□□□ 0.56
FAM3B-206ENST00000518236 CUL7Q14999 1698 aa18.54■□□□□ 0.56
FAM3B-206ENST00000518236 KIAA0586Q9BVV6 1533 aa18.53■□□□□ 0.56
FAM3B-206ENST00000518236 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.54
FAM3B-206ENST00000518236 KIF13AQ9H1H9 1805 aa18.36■□□□□ 0.53
FAM3B-206ENST00000518236 IQGAP2Q13576 1575 aa18.33■□□□□ 0.52
FAM3B-206ENST00000518236 PTPRGP23470 1445 aa18.32■□□□□ 0.52
FAM3B-206ENST00000518236 PRXQ9BXM0 1461 aa18.31■□□□□ 0.52
FAM3B-206ENST00000518236 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
FAM3B-206ENST00000518236 DISP1Q96F81 1524 aa18.3■□□□□ 0.52
FAM3B-206ENST00000518236 CARMIL2Q6F5E8 1435 aa18.3■□□□□ 0.52
FAM3B-206ENST00000518236 ADCY10Q96PN6 1610 aa18.3■□□□□ 0.52
FAM3B-206ENST00000518236 NPM1P06748 294 aaKnown RBP eCLIP18.27■□□□□ 0.52
FAM3B-206ENST00000518236 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
FAM3B-206ENST00000518236 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
FAM3B-206ENST00000518236 MAPKBP1O60336 1514 aa18.23■□□□□ 0.51
FAM3B-206ENST00000518236 CSRNP3Q8WYN3 585 aa18.23■□□□□ 0.51
FAM3B-206ENST00000518236 ABCC10Q5T3U5 1492 aa18.21■□□□□ 0.51
FAM3B-206ENST00000518236 FAM69CQ0P6D2 419 aa18.2■□□□□ 0.5
FAM3B-206ENST00000518236 DIP2BQ9P265 1576 aa18.18■□□□□ 0.5
FAM3B-206ENST00000518236 UACAQ9BZF9 1416 aa18.18■□□□□ 0.5
FAM3B-206ENST00000518236 UHRF1BP1LA0JNW5 1464 aa18.18■□□□□ 0.5
FAM3B-206ENST00000518236 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
FAM3B-206ENST00000518236 ABCC2Q92887 1545 aa18.17■□□□□ 0.5
FAM3B-206ENST00000518236 EEA1Q15075 1411 aa18.14■□□□□ 0.49
FAM3B-206ENST00000518236 CTTNBP2Q8WZ74 1663 aa18.12■□□□□ 0.49
FAM3B-206ENST00000518236 KDM5BQ9UGL1 1544 aa18.1■□□□□ 0.49
FAM3B-206ENST00000518236 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
FAM3B-206ENST00000518236 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
FAM3B-206ENST00000518236 ASXL2Q76L83 1435 aa18.09■□□□□ 0.49
FAM3B-206ENST00000518236 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
FAM3B-206ENST00000518236 TSPOAP1O95153 1857 aa18.07■□□□□ 0.48
FAM3B-206ENST00000518236 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
FAM3B-206ENST00000518236 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
FAM3B-206ENST00000518236 ABCA8O94911 1581 aa18.02■□□□□ 0.48
FAM3B-206ENST00000518236 PPRC1Q5VV67 1664 aaKnown RBP18.01■□□□□ 0.47
FAM3B-206ENST00000518236 GLI2P10070 1586 aa18■□□□□ 0.47
FAM3B-206ENST00000518236 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
FAM3B-206ENST00000518236 ZCCHC11Q5TAX3 1644 aaKnown RBP17.99■□□□□ 0.47
FAM3B-206ENST00000518236 KDM6BO15054 1643 aa17.97■□□□□ 0.47
FAM3B-206ENST00000518236 SAMD9Q5K651 1589 aa17.96■□□□□ 0.47
FAM3B-206ENST00000518236 KIF21BO75037 1637 aa17.94■□□□□ 0.46
FAM3B-206ENST00000518236 WDR7Q9Y4E6 1490 aa17.94■□□□□ 0.46
FAM3B-206ENST00000518236 ADRA2BP18089 450 aa17.93■□□□□ 0.46
FAM3B-206ENST00000518236 RANGAP1P46060 587 aaPredicted RBP17.93■□□□□ 0.46
FAM3B-206ENST00000518236 ATP10BO94823 1461 aa17.91■□□□□ 0.46
FAM3B-206ENST00000518236 ARID3CA6NKF2 412 aa17.91■□□□□ 0.46
FAM3B-206ENST00000518236 MAP3K4Q9Y6R4 1608 aa17.9■□□□□ 0.46
FAM3B-206ENST00000518236 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.45
FAM3B-206ENST00000518236 EHMT2Q96KQ7 1210 aa17.88■□□□□ 0.45
FAM3B-206ENST00000518236 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
FAM3B-206ENST00000518236 COL17A1Q9UMD9 1497 aaPredicted RBP17.87■□□□□ 0.45
FAM3B-206ENST00000518236 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
FAM3B-206ENST00000518236 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.44
FAM3B-206ENST00000518236 NUP153P49790 1475 aaKnown RBP17.82■□□□□ 0.44
FAM3B-206ENST00000518236 CD109Q6YHK3 1445 aa17.82■□□□□ 0.44
FAM3B-206ENST00000518236 EFCAB5A4FU69 1503 aa17.82■□□□□ 0.44
FAM3B-206ENST00000518236 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
FAM3B-206ENST00000518236 MAGI3Q5TCQ9 1506 aa17.8■□□□□ 0.44
FAM3B-206ENST00000518236 KDM4FA0A1W2PPD8 638 aa17.78■□□□□ 0.44
FAM3B-206ENST00000518236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
FAM3B-206ENST00000518236 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
FAM3B-206ENST00000518236 ARHGAP35Q9NRY4 1499 aa17.75■□□□□ 0.43
FAM3B-206ENST00000518236 CFAP43Q8NDM7 1665 aa17.74■□□□□ 0.43
FAM3B-206ENST00000518236 ABCA9Q8IUA7 1624 aa17.7■□□□□ 0.42
FAM3B-206ENST00000518236 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
FAM3B-206ENST00000518236 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
FAM3B-206ENST00000518236 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
FAM3B-206ENST00000518236 CDK13Q14004 1512 aaKnown RBP17.66■□□□□ 0.42
FAM3B-206ENST00000518236 ADGRL1O94910 1474 aa17.65■□□□□ 0.42
FAM3B-206ENST00000518236 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
FAM3B-206ENST00000518236 PHLDB1Q86UU1 1377 aa17.63■□□□□ 0.41
FAM3B-206ENST00000518236 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
FAM3B-206ENST00000518236 NEO1Q92859 1461 aa17.61■□□□□ 0.41
FAM3B-206ENST00000518236 CACNB1Q02641 598 aaPredicted RBP17.6■□□□□ 0.41
FAM3B-206ENST00000518236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.6■□□□□ 0.41
FAM3B-206ENST00000518236 RAPGEF3O95398 923 aa17.59■□□□□ 0.41
FAM3B-206ENST00000518236 HECW1Q76N89 1606 aa17.58■□□□□ 0.4
FAM3B-206ENST00000518236 TTC37Q6PGP7 1564 aa17.55■□□□□ 0.4
FAM3B-206ENST00000518236 CLIP1P30622 1438 aa17.54■□□□□ 0.4
FAM3B-206ENST00000518236 AKNAQ7Z591 1439 aa17.54■□□□□ 0.4
FAM3B-206ENST00000518236 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
FAM3B-206ENST00000518236 FANCAO15360 1455 aa17.53■□□□□ 0.4
FAM3B-206ENST00000518236 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
FAM3B-206ENST00000518236 PLCH2O75038 1416 aa17.52■□□□□ 0.4
FAM3B-206ENST00000518236 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.4
FAM3B-206ENST00000518236 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
FAM3B-206ENST00000518236 PCF11O94913 1555 aaKnown RBP17.49■□□□□ 0.39
FAM3B-206ENST00000518236 LRRIQ1Q96JM4 1722 aa17.49■□□□□ 0.39
FAM3B-206ENST00000518236 DENND4BO75064 1496 aaPredicted RBP17.49■□□□□ 0.39
FAM3B-206ENST00000518236 KIF14Q15058 1648 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms