RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
FAM3B-206ENST00000518236 AEBP2Q6ZN18 517 aaPredicted RBP25.19■■□□□ 1.62
FAM3B-206ENST00000518236 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
FAM3B-206ENST00000518236 ABCC9O60706 1549 aa23.59■■□□□ 1.37
FAM3B-206ENST00000518236 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
FAM3B-206ENST00000518236 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
FAM3B-206ENST00000518236 NACADO15069 1562 aa22.44■■□□□ 1.18
FAM3B-206ENST00000518236 DCAF8L2P0C7V8 631 aa22.42■■□□□ 1.18
FAM3B-206ENST00000518236 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
FAM3B-206ENST00000518236 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
FAM3B-206ENST00000518236 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
FAM3B-206ENST00000518236 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
FAM3B-206ENST00000518236 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
FAM3B-206ENST00000518236 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
FAM3B-206ENST00000518236 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
FAM3B-206ENST00000518236 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
FAM3B-206ENST00000518236 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
FAM3B-206ENST00000518236 POTEDQ86YR6 584 aa21.53■■□□□ 1.04
FAM3B-206ENST00000518236 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
FAM3B-206ENST00000518236 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
FAM3B-206ENST00000518236 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
FAM3B-206ENST00000518236 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
FAM3B-206ENST00000518236 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
FAM3B-206ENST00000518236 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
FAM3B-206ENST00000518236 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
FAM3B-206ENST00000518236 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
FAM3B-206ENST00000518236 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
FAM3B-206ENST00000518236 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
FAM3B-206ENST00000518236 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
FAM3B-206ENST00000518236 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
FAM3B-206ENST00000518236 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
FAM3B-206ENST00000518236 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
FAM3B-206ENST00000518236 NESP48681 1621 aa20.36■□□□□ 0.85
FAM3B-206ENST00000518236 FOXD1Q16676 465 aa20.36■□□□□ 0.85
FAM3B-206ENST00000518236 WIZO95785 1651 aa20.3■□□□□ 0.84
FAM3B-206ENST00000518236 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
FAM3B-206ENST00000518236 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
FAM3B-206ENST00000518236 CUX2O14529 1486 aa20.27■□□□□ 0.84
FAM3B-206ENST00000518236 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
FAM3B-206ENST00000518236 DNAJC5Q9H3Z4 198 aa20.18■□□□□ 0.82
FAM3B-206ENST00000518236 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
FAM3B-206ENST00000518236 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
FAM3B-206ENST00000518236 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
FAM3B-206ENST00000518236 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
FAM3B-206ENST00000518236 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
FAM3B-206ENST00000518236 CFTRP13569 1480 aa19.97■□□□□ 0.79
FAM3B-206ENST00000518236 MRC2Q9UBG0 1479 aa19.91■□□□□ 0.78
FAM3B-206ENST00000518236 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
FAM3B-206ENST00000518236 FANCD2Q9BXW9 1451 aa19.89■□□□□ 0.77
FAM3B-206ENST00000518236 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
FAM3B-206ENST00000518236 WDR62O43379 1518 aa19.85■□□□□ 0.77
FAM3B-206ENST00000518236 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
FAM3B-206ENST00000518236 PRDM2Q13029 1718 aa19.66■□□□□ 0.74
FAM3B-206ENST00000518236 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
FAM3B-206ENST00000518236 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
FAM3B-206ENST00000518236 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
FAM3B-206ENST00000518236 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
FAM3B-206ENST00000518236 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
FAM3B-206ENST00000518236 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
FAM3B-206ENST00000518236 MSH5O43196 834 aa19.45■□□□□ 0.7
FAM3B-206ENST00000518236 POLA1P09884 1462 aaPredicted RBP19.37■□□□□ 0.69
FAM3B-206ENST00000518236 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
FAM3B-206ENST00000518236 TARBP1Q13395 1621 aaKnown RBP19.34■□□□□ 0.69
FAM3B-206ENST00000518236 AQRO60306 1485 aaKnown RBP eCLIP19.32■□□□□ 0.68
FAM3B-206ENST00000518236 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
FAM3B-206ENST00000518236 CUX1P39880 1505 aa19.31■□□□□ 0.68
FAM3B-206ENST00000518236 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
FAM3B-206ENST00000518236 SOGA1O94964 1423 aa19.3■□□□□ 0.68
FAM3B-206ENST00000518236 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
FAM3B-206ENST00000518236 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
FAM3B-206ENST00000518236 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
FAM3B-206ENST00000518236 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
FAM3B-206ENST00000518236 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
FAM3B-206ENST00000518236 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
FAM3B-206ENST00000518236 CHD1O14646 1710 aa19.17■□□□□ 0.66
FAM3B-206ENST00000518236 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
FAM3B-206ENST00000518236 FBLN2P98095 1184 aa19.1■□□□□ 0.65
FAM3B-206ENST00000518236 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
FAM3B-206ENST00000518236 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
FAM3B-206ENST00000518236 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
FAM3B-206ENST00000518236 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.65
FAM3B-206ENST00000518236 GRIN2BQ13224 1484 aa19.08■□□□□ 0.64
FAM3B-206ENST00000518236 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
FAM3B-206ENST00000518236 MAGI1Q96QZ7 1491 aaPredicted RBP19.04■□□□□ 0.64
FAM3B-206ENST00000518236 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
FAM3B-206ENST00000518236 TOP2BQ02880 1626 aa19.03■□□□□ 0.64
FAM3B-206ENST00000518236 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
FAM3B-206ENST00000518236 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
FAM3B-206ENST00000518236 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
FAM3B-206ENST00000518236 SYNJ2O15056 1496 aa18.98■□□□□ 0.63
FAM3B-206ENST00000518236 PBRM1Q86U86 1689 aa18.93■□□□□ 0.62
FAM3B-206ENST00000518236 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
FAM3B-206ENST00000518236 CLASP1Q7Z460 1538 aa18.93■□□□□ 0.62
FAM3B-206ENST00000518236 CYB5RLQ6IPT4 315 aa18.9■□□□□ 0.62
FAM3B-206ENST00000518236 GRIN2AQ12879 1464 aa18.84■□□□□ 0.61
FAM3B-206ENST00000518236 ADAMTS12P58397 1594 aa18.83■□□□□ 0.6
FAM3B-206ENST00000518236 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.6
FAM3B-206ENST00000518236 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
FAM3B-206ENST00000518236 NUP160Q12769 1436 aa18.79■□□□□ 0.6
FAM3B-206ENST00000518236 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms