RNA–Protein interactions for RNA: ENST00000518080.2

HMBOX1-205, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-205ENST00000518080 CEP162Q5TB80 1403 aa16.03■□□□□ 0.16
HMBOX1-205ENST00000518080 CARMIL1Q5VZK9 1371 aa16.03■□□□□ 0.16
HMBOX1-205ENST00000518080 CTTNBP2Q8WZ74 1663 aa16.03■□□□□ 0.16
HMBOX1-205ENST00000518080 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
HMBOX1-205ENST00000518080 GRIN2BQ13224 1484 aa16.01■□□□□ 0.15
HMBOX1-205ENST00000518080 ZNF608Q9ULD9 1512 aaPredicted RBP16■□□□□ 0.15
HMBOX1-205ENST00000518080 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.15
HMBOX1-205ENST00000518080 CLIP1P30622 1438 aa15.94■□□□□ 0.14
HMBOX1-205ENST00000518080 SNAPC4Q5SXM2 1469 aa15.93■□□□□ 0.14
HMBOX1-205ENST00000518080 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
HMBOX1-205ENST00000518080 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
HMBOX1-205ENST00000518080 RANGAP1P46060 587 aaPredicted RBP15.88■□□□□ 0.13
HMBOX1-205ENST00000518080 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
HMBOX1-205ENST00000518080 EFCAB5A4FU69 1503 aa15.82■□□□□ 0.12
HMBOX1-205ENST00000518080 GRIN2AQ12879 1464 aa15.81■□□□□ 0.12
HMBOX1-205ENST00000518080 IQGAP2Q13576 1575 aa15.81■□□□□ 0.12
HMBOX1-205ENST00000518080 CHD1O14646 1710 aa15.8■□□□□ 0.12
HMBOX1-205ENST00000518080 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
HMBOX1-205ENST00000518080 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
HMBOX1-205ENST00000518080 ARHGAP35Q9NRY4 1499 aa15.77■□□□□ 0.11
HMBOX1-205ENST00000518080 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
HMBOX1-205ENST00000518080 FBLN2P98095 1184 aa15.73■□□□□ 0.11
HMBOX1-205ENST00000518080 SAMD9Q5K651 1589 aa15.73■□□□□ 0.11
HMBOX1-205ENST00000518080 CEP170Q5SW79 1584 aa15.73■□□□□ 0.11
HMBOX1-205ENST00000518080 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
HMBOX1-205ENST00000518080 KIAA0586Q9BVV6 1533 aa15.69■□□□□ 0.1
HMBOX1-205ENST00000518080 APLP2Q06481 763 aa15.67■□□□□ 0.1
HMBOX1-205ENST00000518080 FHOD3Q2V2M9 1422 aa15.67■□□□□ 0.1
HMBOX1-205ENST00000518080 PCF11O94913 1555 aaKnown RBP15.66■□□□□ 0.1
HMBOX1-205ENST00000518080 UGGT2Q9NYU1 1516 aa15.66■□□□□ 0.1
HMBOX1-205ENST00000518080 NUP160Q12769 1436 aa15.66■□□□□ 0.1
HMBOX1-205ENST00000518080 KIAA0556O60303 1618 aa15.65■□□□□ 0.1
HMBOX1-205ENST00000518080 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
HMBOX1-205ENST00000518080 FMN1Q68DA7 1419 aa15.62■□□□□ 0.09
HMBOX1-205ENST00000518080 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
HMBOX1-205ENST00000518080 CFAP43Q8NDM7 1665 aa15.62■□□□□ 0.09
HMBOX1-205ENST00000518080 FYCO1Q9BQS8 1478 aa15.6■□□□□ 0.09
HMBOX1-205ENST00000518080 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
HMBOX1-205ENST00000518080 HECW1Q76N89 1606 aa15.57■□□□□ 0.08
HMBOX1-205ENST00000518080 PPARGC1BQ86YN6 1023 aaKnown RBP15.57■□□□□ 0.08
HMBOX1-205ENST00000518080 TTBK1Q5TCY1 1321 aaPredicted RBP15.56■□□□□ 0.08
HMBOX1-205ENST00000518080 CARMIL2Q6F5E8 1435 aa15.56■□□□□ 0.08
HMBOX1-205ENST00000518080 TIAM1Q13009 1591 aa15.56■□□□□ 0.08
HMBOX1-205ENST00000518080 DISP1Q96F81 1524 aa15.55■□□□□ 0.08
HMBOX1-205ENST00000518080 CASKIN1Q8WXD9 1431 aa15.53■□□□□ 0.08
HMBOX1-205ENST00000518080 SHROOM2Q13796 1616 aa15.53■□□□□ 0.08
HMBOX1-205ENST00000518080 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
HMBOX1-205ENST00000518080 ATP1B4Q9UN42 357 aaPredicted RBP15.52■□□□□ 0.08
HMBOX1-205ENST00000518080 MAP3K1Q13233 1512 aa15.51■□□□□ 0.07
HMBOX1-205ENST00000518080 CLASP1Q7Z460 1538 aa15.51■□□□□ 0.07
HMBOX1-205ENST00000518080 LRRIQ1Q96JM4 1722 aa15.5■□□□□ 0.07
HMBOX1-205ENST00000518080 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
HMBOX1-205ENST00000518080 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
HMBOX1-205ENST00000518080 CCDC18Q5T9S5 1454 aa15.48■□□□□ 0.07
HMBOX1-205ENST00000518080 PCGF6Q9BYE7 350 aa15.48■□□□□ 0.07
HMBOX1-205ENST00000518080 JPH4Q96JJ6 628 aa15.47■□□□□ 0.07
HMBOX1-205ENST00000518080 PRG4Q92954 1404 aaPredicted RBP15.46■□□□□ 0.07
HMBOX1-205ENST00000518080 LRRC9Q6ZRR7 1453 aa15.42■□□□□ 0.06
HMBOX1-205ENST00000518080 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
HMBOX1-205ENST00000518080 EHBP1L1Q8N3D4 1523 aa15.42■□□□□ 0.06
HMBOX1-205ENST00000518080 SUPT6HQ7KZ85 1726 aaKnown RBP15.4■□□□□ 0.06
HMBOX1-205ENST00000518080 EPRSP07814 1512 aaKnown RBP15.38■□□□□ 0.05
HMBOX1-205ENST00000518080 MTUS2Q5JR59 1369 aa15.38■□□□□ 0.05
HMBOX1-205ENST00000518080 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
HMBOX1-205ENST00000518080 ABCA8O94911 1581 aa15.36■□□□□ 0.05
HMBOX1-205ENST00000518080 KANK4Q5T7N3 995 aaPredicted RBP15.36■□□□□ 0.05
HMBOX1-205ENST00000518080 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
HMBOX1-205ENST00000518080 NUP153P49790 1475 aaKnown RBP15.35■□□□□ 0.05
HMBOX1-205ENST00000518080 PLB1Q6P1J6 1458 aa15.35■□□□□ 0.05
HMBOX1-205ENST00000518080 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
HMBOX1-205ENST00000518080 RNF216Q9NWF9 866 aaPredicted RBP15.35■□□□□ 0.05
HMBOX1-205ENST00000518080 PTPRGP23470 1445 aa15.34■□□□□ 0.05
HMBOX1-205ENST00000518080 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
HMBOX1-205ENST00000518080 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
HMBOX1-205ENST00000518080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
HMBOX1-205ENST00000518080 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
HMBOX1-205ENST00000518080 MAGI3Q5TCQ9 1506 aa15.28■□□□□ 0.04
HMBOX1-205ENST00000518080 ABCC2Q92887 1545 aa15.28■□□□□ 0.04
HMBOX1-205ENST00000518080 UACAQ9BZF9 1416 aa15.27■□□□□ 0.04
HMBOX1-205ENST00000518080 CDK11AQ9UQ88 783 aaPredicted RBP15.27■□□□□ 0.04
HMBOX1-205ENST00000518080 ADCY10Q96PN6 1610 aa15.26■□□□□ 0.03
HMBOX1-205ENST00000518080 NCOA2Q15596 1464 aa15.26■□□□□ 0.03
HMBOX1-205ENST00000518080 RRBP1Q9P2E9 1410 aaKnown RBP15.26■□□□□ 0.03
HMBOX1-205ENST00000518080 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
HMBOX1-205ENST00000518080 KIF14Q15058 1648 aa15.25■□□□□ 0.03
HMBOX1-205ENST00000518080 PHLDB1Q86UU1 1377 aa15.24■□□□□ 0.03
HMBOX1-205ENST00000518080 CCNB3Q8WWL7 1395 aa15.23■□□□□ 0.03
HMBOX1-205ENST00000518080 ZCCHC11Q5TAX3 1644 aaKnown RBP15.22■□□□□ 0.03
HMBOX1-205ENST00000518080 TROQ12816 1431 aaPredicted RBP15.22■□□□□ 0.03
HMBOX1-205ENST00000518080 MYOM3Q5VTT5 1437 aa15.2■□□□□ 0.02
HMBOX1-205ENST00000518080 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
HMBOX1-205ENST00000518080 UHRF1BP1LA0JNW5 1464 aa15.2■□□□□ 0.02
HMBOX1-205ENST00000518080 ATP10BO94823 1461 aa15.19■□□□□ 0.02
HMBOX1-205ENST00000518080 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
HMBOX1-205ENST00000518080 PTPN23Q9H3S7 1636 aa15.18■□□□□ 0.02
HMBOX1-205ENST00000518080 PLEKHD1A6NEE1 506 aa15.15■□□□□ 0.02
HMBOX1-205ENST00000518080 FAM50AQ14320 339 aaKnown RBP15.15■□□□□ 0.02
HMBOX1-205ENST00000518080 CDC42BPAQ5VT25 1732 aa15.14■□□□□ 0.01
HMBOX1-205ENST00000518080 KDM5BQ9UGL1 1544 aa15.12■□□□□ 0.01
HMBOX1-205ENST00000518080 MYO5CQ9NQX4 1742 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms