RNA–Protein interactions for RNA: ENST00000518080.2

HMBOX1-205, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-205ENST00000518080 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
HMBOX1-205ENST00000518080 NISCHQ9Y2I1 1504 aa22.9■■□□□ 1.26
HMBOX1-205ENST00000518080 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
HMBOX1-205ENST00000518080 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
HMBOX1-205ENST00000518080 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
HMBOX1-205ENST00000518080 CCDC180Q9P1Z9 1646 aa20.18■□□□□ 0.82
HMBOX1-205ENST00000518080 FOXD1Q16676 465 aa19.4■□□□□ 0.7
HMBOX1-205ENST00000518080 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
HMBOX1-205ENST00000518080 ABCC9O60706 1549 aa19.04■□□□□ 0.64
HMBOX1-205ENST00000518080 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
HMBOX1-205ENST00000518080 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
HMBOX1-205ENST00000518080 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
HMBOX1-205ENST00000518080 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
HMBOX1-205ENST00000518080 NACADO15069 1562 aa18.72■□□□□ 0.59
HMBOX1-205ENST00000518080 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.57
HMBOX1-205ENST00000518080 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
HMBOX1-205ENST00000518080 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
HMBOX1-205ENST00000518080 MSH5O43196 834 aa18.41■□□□□ 0.54
HMBOX1-205ENST00000518080 UNC13AQ9UPW8 1703 aa18.31■□□□□ 0.52
HMBOX1-205ENST00000518080 PIAS4Q8N2W9 510 aaPredicted RBP18■□□□□ 0.47
HMBOX1-205ENST00000518080 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
HMBOX1-205ENST00000518080 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
HMBOX1-205ENST00000518080 SUPT5HO00267 1087 aaKnown RBP17.82■□□□□ 0.44
HMBOX1-205ENST00000518080 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
HMBOX1-205ENST00000518080 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
HMBOX1-205ENST00000518080 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
HMBOX1-205ENST00000518080 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
HMBOX1-205ENST00000518080 SMARCA4P51532 1647 aa17.7■□□□□ 0.42
HMBOX1-205ENST00000518080 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
HMBOX1-205ENST00000518080 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
HMBOX1-205ENST00000518080 ADRA2BP18089 450 aa17.65■□□□□ 0.42
HMBOX1-205ENST00000518080 WIZO95785 1651 aa17.59■□□□□ 0.41
HMBOX1-205ENST00000518080 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
HMBOX1-205ENST00000518080 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
HMBOX1-205ENST00000518080 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
HMBOX1-205ENST00000518080 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
HMBOX1-205ENST00000518080 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
HMBOX1-205ENST00000518080 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
HMBOX1-205ENST00000518080 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
HMBOX1-205ENST00000518080 CC2D2AQ9P2K1 1620 aa17.26■□□□□ 0.35
HMBOX1-205ENST00000518080 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
HMBOX1-205ENST00000518080 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
HMBOX1-205ENST00000518080 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
HMBOX1-205ENST00000518080 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
HMBOX1-205ENST00000518080 CFTRP13569 1480 aa16.79■□□□□ 0.28
HMBOX1-205ENST00000518080 TRIM41Q8WV44 630 aa16.77■□□□□ 0.28
HMBOX1-205ENST00000518080 LAMC3Q9Y6N6 1575 aa16.74■□□□□ 0.27
HMBOX1-205ENST00000518080 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
HMBOX1-205ENST00000518080 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
HMBOX1-205ENST00000518080 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
HMBOX1-205ENST00000518080 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
HMBOX1-205ENST00000518080 NESP48681 1621 aa16.65■□□□□ 0.26
HMBOX1-205ENST00000518080 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
HMBOX1-205ENST00000518080 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
HMBOX1-205ENST00000518080 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
HMBOX1-205ENST00000518080 KIF21AQ7Z4S6 1674 aa16.6■□□□□ 0.25
HMBOX1-205ENST00000518080 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
HMBOX1-205ENST00000518080 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
HMBOX1-205ENST00000518080 CUX1P39880 1505 aa16.55■□□□□ 0.24
HMBOX1-205ENST00000518080 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
HMBOX1-205ENST00000518080 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
HMBOX1-205ENST00000518080 EEA1Q15075 1411 aa16.45■□□□□ 0.22
HMBOX1-205ENST00000518080 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
HMBOX1-205ENST00000518080 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
HMBOX1-205ENST00000518080 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
HMBOX1-205ENST00000518080 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
HMBOX1-205ENST00000518080 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
HMBOX1-205ENST00000518080 SOGA1O94964 1423 aa16.39■□□□□ 0.21
HMBOX1-205ENST00000518080 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
HMBOX1-205ENST00000518080 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
HMBOX1-205ENST00000518080 POLA1P09884 1462 aaPredicted RBP16.33■□□□□ 0.2
HMBOX1-205ENST00000518080 RUSC2Q8N2Y8 1516 aa16.32■□□□□ 0.2
HMBOX1-205ENST00000518080 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
HMBOX1-205ENST00000518080 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
HMBOX1-205ENST00000518080 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
HMBOX1-205ENST00000518080 WDR62O43379 1518 aa16.29■□□□□ 0.2
HMBOX1-205ENST00000518080 CUX2O14529 1486 aa16.29■□□□□ 0.2
HMBOX1-205ENST00000518080 KIF21BO75037 1637 aa16.29■□□□□ 0.2
HMBOX1-205ENST00000518080 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
HMBOX1-205ENST00000518080 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
HMBOX1-205ENST00000518080 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
HMBOX1-205ENST00000518080 EHMT2Q96KQ7 1210 aa16.25■□□□□ 0.19
HMBOX1-205ENST00000518080 GOLGA3Q08378 1498 aa16.24■□□□□ 0.19
HMBOX1-205ENST00000518080 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
HMBOX1-205ENST00000518080 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
HMBOX1-205ENST00000518080 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
HMBOX1-205ENST00000518080 ABCA5Q8WWZ7 1642 aa16.19■□□□□ 0.18
HMBOX1-205ENST00000518080 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
HMBOX1-205ENST00000518080 CUL7Q14999 1698 aa16.18■□□□□ 0.18
HMBOX1-205ENST00000518080 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
HMBOX1-205ENST00000518080 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
HMBOX1-205ENST00000518080 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
HMBOX1-205ENST00000518080 UBTFP17480 764 aaKnown RBP16.11■□□□□ 0.17
HMBOX1-205ENST00000518080 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
HMBOX1-205ENST00000518080 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
HMBOX1-205ENST00000518080 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
HMBOX1-205ENST00000518080 EIF4G3O43432 1585 aaKnown RBP16.09■□□□□ 0.17
HMBOX1-205ENST00000518080 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
HMBOX1-205ENST00000518080 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
HMBOX1-205ENST00000518080 IGF1RP08069 1367 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms