RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.03
PCM1-204ENST00000517730 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
PCM1-204ENST00000517730 ITGAEP38570 1179 aa21.51■■□□□ 1.03
PCM1-204ENST00000517730 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
PCM1-204ENST00000517730 CUX1P39880 1505 aa21.45■■□□□ 1.02
PCM1-204ENST00000517730 ANP32CO43423 234 aa21.43■■□□□ 1.02
PCM1-204ENST00000517730 LRRC9Q6ZRR7 1453 aa21.39■■□□□ 1.01
PCM1-204ENST00000517730 SIN3AQ96ST3 1273 aa21.37■■□□□ 1.01
PCM1-204ENST00000517730 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
PCM1-204ENST00000517730 FANCIQ9NVI1 1328 aa21.33■■□□□ 1
PCM1-204ENST00000517730 PHLDB1Q86UU1 1377 aa21.32■■□□□ 1
PCM1-204ENST00000517730 HMGXB3Q12766 1538 aa21.29■■□□□ 1
PCM1-204ENST00000517730 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
PCM1-204ENST00000517730 CFAP43Q8NDM7 1665 aa21.29■■□□□ 1
PCM1-204ENST00000517730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.27■■□□□ 1
PCM1-204ENST00000517730 FAM50AQ14320 339 aaKnown RBP21.27■■□□□ 1
PCM1-204ENST00000517730 MSH5O43196 834 aa21.25■□□□□ 0.99
PCM1-204ENST00000517730 CFTRP13569 1480 aa21.23■□□□□ 0.99
PCM1-204ENST00000517730 IGF1RP08069 1367 aa21.23■□□□□ 0.99
PCM1-204ENST00000517730 CDK11AQ9UQ88 783 aaPredicted RBP21.23■□□□□ 0.99
PCM1-204ENST00000517730 NCAPD3P42695 1498 aa21.23■□□□□ 0.99
PCM1-204ENST00000517730 ERICH6BQ5W0A0 696 aa21.22■□□□□ 0.99
PCM1-204ENST00000517730 TONSLQ96HA7 1378 aa21.2■□□□□ 0.98
PCM1-204ENST00000517730 MYT1LQ9UL68 1186 aa21.19■□□□□ 0.98
PCM1-204ENST00000517730 HIRIP3Q9BW71 556 aaPredicted RBP21.19■□□□□ 0.98
PCM1-204ENST00000517730 ERICH6Q7L0X2 663 aa21.17■□□□□ 0.98
PCM1-204ENST00000517730 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
PCM1-204ENST00000517730 PCF11O94913 1555 aaKnown RBP21.15■□□□□ 0.98
PCM1-204ENST00000517730 HNRNPUQ00839 825 aaKnown RBP eCLIP21.11■□□□□ 0.97
PCM1-204ENST00000517730 FYCO1Q9BQS8 1478 aa21.11■□□□□ 0.97
PCM1-204ENST00000517730 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
PCM1-204ENST00000517730 UACAQ9BZF9 1416 aa21.09■□□□□ 0.97
PCM1-204ENST00000517730 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.971e-7■■■■■ 32.2
PCM1-204ENST00000517730 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
PCM1-204ENST00000517730 PPP4R2Q9NY27 417 aa21.06■□□□□ 0.96
PCM1-204ENST00000517730 FGD5Q6ZNL6 1462 aa21.06■□□□□ 0.96
PCM1-204ENST00000517730 CASKIN1Q8WXD9 1431 aa21.05■□□□□ 0.96
PCM1-204ENST00000517730 HFM1A2PYH4 1435 aa21.05■□□□□ 0.96
PCM1-204ENST00000517730 EFCAB5A4FU69 1503 aa21.05■□□□□ 0.96
PCM1-204ENST00000517730 FGD6Q6ZV73 1430 aa21.04■□□□□ 0.96
PCM1-204ENST00000517730 PTPN23Q9H3S7 1636 aa21■□□□□ 0.95
PCM1-204ENST00000517730 IRX6P78412 446 aaPredicted RBP20.98■□□□□ 0.95
PCM1-204ENST00000517730 KDM5BQ9UGL1 1544 aa20.98■□□□□ 0.95
PCM1-204ENST00000517730 ATP1B4Q9UN42 357 aaPredicted RBP20.98■□□□□ 0.95
PCM1-204ENST00000517730 FHOD3Q2V2M9 1422 aa20.96■□□□□ 0.95
PCM1-204ENST00000517730 NCOA2Q15596 1464 aa20.95■□□□□ 0.94
PCM1-204ENST00000517730 P3H3Q8IVL6 736 aa20.94■□□□□ 0.94
PCM1-204ENST00000517730 WASHC2AQ641Q2 1341 aa20.92■□□□□ 0.94
PCM1-204ENST00000517730 NAIPQ13075 1403 aa20.92■□□□□ 0.94
PCM1-204ENST00000517730 FMN1Q68DA7 1419 aa20.92■□□□□ 0.94
PCM1-204ENST00000517730 PTPRKQ15262 1439 aa20.9■□□□□ 0.94
PCM1-204ENST00000517730 CNTLNQ9NXG0 1405 aa20.9■□□□□ 0.94
PCM1-204ENST00000517730 HSPA5P11021 654 aaKnown RBP20.88■□□□□ 0.93
PCM1-204ENST00000517730 ZBED9Q6R2W3 1325 aa20.87■□□□□ 0.93
PCM1-204ENST00000517730 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
PCM1-204ENST00000517730 EIF4G2P78344 907 aaKnown RBP eCLIP20.86■□□□□ 0.93
PCM1-204ENST00000517730 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
PCM1-204ENST00000517730 DEKP35659 375 aaKnown RBP20.85■□□□□ 0.93
PCM1-204ENST00000517730 SNAPC4Q5SXM2 1469 aa20.85■□□□□ 0.93
PCM1-204ENST00000517730 MYOM3Q5VTT5 1437 aa20.84■□□□□ 0.93
PCM1-204ENST00000517730 CTTNBP2Q8WZ74 1663 aa20.83■□□□□ 0.92
PCM1-204ENST00000517730 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.92
PCM1-204ENST00000517730 NOP58Q9Y2X3 529 aaKnown RBP20.81■□□□□ 0.92
PCM1-204ENST00000517730 CUL7Q14999 1698 aa20.81■□□□□ 0.92
PCM1-204ENST00000517730 PRKRIP1Q9H875 184 aaPredicted RBP20.8■□□□□ 0.92
PCM1-204ENST00000517730 HECW1Q76N89 1606 aa20.8■□□□□ 0.92
PCM1-204ENST00000517730 B4GALNT3Q6L9W6 998 aa20.79■□□□□ 0.92
PCM1-204ENST00000517730 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
PCM1-204ENST00000517730 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
PCM1-204ENST00000517730 SUPT6HQ7KZ85 1726 aaKnown RBP20.77■□□□□ 0.92
PCM1-204ENST00000517730 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
PCM1-204ENST00000517730 CCDC184Q52MB2 194 aa20.77■□□□□ 0.92
PCM1-204ENST00000517730 CCDC7Q96M83 1385 aa20.77■□□□□ 0.91
PCM1-204ENST00000517730 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
PCM1-204ENST00000517730 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
PCM1-204ENST00000517730 GCC2Q8IWJ2 1684 aa20.75■□□□□ 0.91
PCM1-204ENST00000517730 AKNAQ7Z591 1439 aa20.75■□□□□ 0.91
PCM1-204ENST00000517730 FAM9BQ8IZU0 186 aa20.74■□□□□ 0.91
PCM1-204ENST00000517730 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
PCM1-204ENST00000517730 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
PCM1-204ENST00000517730 SAMD9Q5K651 1589 aa20.7■□□□□ 0.9
PCM1-204ENST00000517730 UGGT2Q9NYU1 1516 aa20.7■□□□□ 0.9
PCM1-204ENST00000517730 SMG6Q86US8 1419 aaKnown RBP20.7■□□□□ 0.9
PCM1-204ENST00000517730 TCOF1Q13428 1488 aaKnown RBP20.7■□□□□ 0.9
PCM1-204ENST00000517730 DNMBPQ6XZF7 1577 aa20.7■□□□□ 0.9
PCM1-204ENST00000517730 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
PCM1-204ENST00000517730 LRRIQ1Q96JM4 1722 aa20.68■□□□□ 0.9
PCM1-204ENST00000517730 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
PCM1-204ENST00000517730 PRKCSHP14314 528 aaPredicted RBP20.66■□□□□ 0.9
PCM1-204ENST00000517730 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
PCM1-204ENST00000517730 POLR1AO95602 1720 aaPredicted RBP20.65■□□□□ 0.9
PCM1-204ENST00000517730 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
PCM1-204ENST00000517730 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
PCM1-204ENST00000517730 L3MBTL2Q969R5 705 aa20.65■□□□□ 0.9
PCM1-204ENST00000517730 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
PCM1-204ENST00000517730 RNF123Q5XPI4 1314 aa20.64■□□□□ 0.89
PCM1-204ENST00000517730 PAK3O75914 559 aaPredicted RBP20.63■□□□□ 0.89
PCM1-204ENST00000517730 IPO9Q96P70 1041 aaKnown RBP20.63■□□□□ 0.89
PCM1-204ENST00000517730 RRP7BPQ9NSQ0 103 aa20.63■□□□□ 0.89
PCM1-204ENST00000517730 POLA1P09884 1462 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms