RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 NISCHQ9Y2I1 1504 aa29.7■■■□□ 2.34
PCM1-204ENST00000517730 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
PCM1-204ENST00000517730 HRCP23327 699 aa25.54■■□□□ 1.68
PCM1-204ENST00000517730 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
PCM1-204ENST00000517730 ZCCHC6Q5VYS8 1495 aaKnown RBP25.25■■□□□ 1.63
PCM1-204ENST00000517730 MYO15BQ96JP2 1530 aa25.18■■□□□ 1.62
PCM1-204ENST00000517730 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
PCM1-204ENST00000517730 PCGF6Q9BYE7 350 aa25■■□□□ 1.59
PCM1-204ENST00000517730 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
PCM1-204ENST00000517730 DCAF1Q9Y4B6 1507 aa24.87■■□□□ 1.57
PCM1-204ENST00000517730 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
PCM1-204ENST00000517730 TRIM26Q12899 539 aaPredicted RBP24.48■■□□□ 1.51
PCM1-204ENST00000517730 PELP1Q8IZL8 1130 aaKnown RBP24.42■■□□□ 1.5
PCM1-204ENST00000517730 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
PCM1-204ENST00000517730 ZEB1P37275 1124 aaPredicted RBP24.32■■□□□ 1.48
PCM1-204ENST00000517730 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
PCM1-204ENST00000517730 ABCC9O60706 1549 aa23.96■■□□□ 1.43
PCM1-204ENST00000517730 SCAF1Q9H7N4 1312 aaKnown RBP23.88■■□□□ 1.41
PCM1-204ENST00000517730 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
PCM1-204ENST00000517730 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
PCM1-204ENST00000517730 RB1CC1Q8TDY2 1594 aa23.62■■□□□ 1.37
PCM1-204ENST00000517730 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
PCM1-204ENST00000517730 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
PCM1-204ENST00000517730 MYT1Q01538 1121 aa23.48■■□□□ 1.35
PCM1-204ENST00000517730 SCRIBQ14160 1630 aa23.43■■□□□ 1.34
PCM1-204ENST00000517730 NEUROD1Q13562 356 aa23.34■■□□□ 1.33
PCM1-204ENST00000517730 CENPBP07199 599 aaPredicted RBP23.33■■□□□ 1.33
PCM1-204ENST00000517730 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
PCM1-204ENST00000517730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
PCM1-204ENST00000517730 DIEXFQ68CQ4 756 aaKnown RBP23.23■■□□□ 1.31
PCM1-204ENST00000517730 EHMT2Q96KQ7 1210 aa23.21■■□□□ 1.31
PCM1-204ENST00000517730 GTF3C3Q9Y5Q9 886 aa23.2■■□□□ 1.3
PCM1-204ENST00000517730 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
PCM1-204ENST00000517730 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.28
PCM1-204ENST00000517730 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
PCM1-204ENST00000517730 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
PCM1-204ENST00000517730 WIZO95785 1651 aa22.98■■□□□ 1.27
PCM1-204ENST00000517730 BAZ1AQ9NRL2 1556 aaPredicted RBP22.96■■□□□ 1.27
PCM1-204ENST00000517730 NACADO15069 1562 aa22.95■■□□□ 1.26
PCM1-204ENST00000517730 ZNF316A6NFI3 1004 aaPredicted RBP22.91■■□□□ 1.26
PCM1-204ENST00000517730 CEP162Q5TB80 1403 aa22.86■■□□□ 1.25
PCM1-204ENST00000517730 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
PCM1-204ENST00000517730 EEA1Q15075 1411 aa22.75■■□□□ 1.23
PCM1-204ENST00000517730 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
PCM1-204ENST00000517730 TOP2AP11388 1531 aaKnown RBP22.69■■□□□ 1.22
PCM1-204ENST00000517730 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
PCM1-204ENST00000517730 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
PCM1-204ENST00000517730 YTHDC1Q96MU7 727 aaKnown RBP22.63■■□□□ 1.21
PCM1-204ENST00000517730 SOGA1O94964 1423 aa22.61■■□□□ 1.21
PCM1-204ENST00000517730 MIER1Q8N108 512 aa22.6■■□□□ 1.21
PCM1-204ENST00000517730 CSRNP3Q8WYN3 585 aa22.59■■□□□ 1.21
PCM1-204ENST00000517730 GOLGA3Q08378 1498 aa22.57■■□□□ 1.2
PCM1-204ENST00000517730 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
PCM1-204ENST00000517730 UBTFP17480 764 aaKnown RBP22.53■■□□□ 1.2
PCM1-204ENST00000517730 CLSPNQ9HAW4 1339 aa22.51■■□□□ 1.19
PCM1-204ENST00000517730 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
PCM1-204ENST00000517730 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
PCM1-204ENST00000517730 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
PCM1-204ENST00000517730 CEP164Q9UPV0 1460 aa22.38■■□□□ 1.17
PCM1-204ENST00000517730 KIF21BO75037 1637 aa22.37■■□□□ 1.17
PCM1-204ENST00000517730 VPS8Q8N3P4 1428 aa22.32■■□□□ 1.16
PCM1-204ENST00000517730 CLIP1P30622 1438 aa22.31■■□□□ 1.16
PCM1-204ENST00000517730 BAZ1BQ9UIG0 1483 aaKnown RBP22.26■■□□□ 1.15
PCM1-204ENST00000517730 APLP2Q06481 763 aa22.24■■□□□ 1.15
PCM1-204ENST00000517730 SUPT16HQ9Y5B9 1047 aaKnown RBP22.21■■□□□ 1.15
PCM1-204ENST00000517730 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
PCM1-204ENST00000517730 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
PCM1-204ENST00000517730 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
PCM1-204ENST00000517730 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
PCM1-204ENST00000517730 UNC13AQ9UPW8 1703 aa22.04■■□□□ 1.12
PCM1-204ENST00000517730 TSHZ2Q9NRE2 1034 aa22.03■■□□□ 1.12
PCM1-204ENST00000517730 ANP32EQ9BTT0 268 aa22.01■■□□□ 1.11
PCM1-204ENST00000517730 CUX2O14529 1486 aa21.93■■□□□ 1.1
PCM1-204ENST00000517730 RRBP1Q9P2E9 1410 aaKnown RBP21.91■■□□□ 1.1
PCM1-204ENST00000517730 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
PCM1-204ENST00000517730 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
PCM1-204ENST00000517730 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
PCM1-204ENST00000517730 PRXQ9BXM0 1461 aa21.81■■□□□ 1.08
PCM1-204ENST00000517730 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
PCM1-204ENST00000517730 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.08
PCM1-204ENST00000517730 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
PCM1-204ENST00000517730 CCNB3Q8WWL7 1395 aa21.76■■□□□ 1.07
PCM1-204ENST00000517730 BICRAQ9NZM4 1560 aa21.75■■□□□ 1.07
PCM1-204ENST00000517730 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
PCM1-204ENST00000517730 BCL11AQ9H165 835 aa21.66■■□□□ 1.06
PCM1-204ENST00000517730 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
PCM1-204ENST00000517730 MAPKBP1O60336 1514 aa21.65■■□□□ 1.06
PCM1-204ENST00000517730 FKBP8Q14318 412 aa21.65■■□□□ 1.06
PCM1-204ENST00000517730 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
PCM1-204ENST00000517730 NEFLP07196 543 aa21.61■■□□□ 1.05
PCM1-204ENST00000517730 PABPN1Q86U42 306 aaKnown RBP eCLIP21.61■■□□□ 1.05
PCM1-204ENST00000517730 BCANQ96GW7 911 aa21.6■■□□□ 1.05
PCM1-204ENST00000517730 MAP3K1Q13233 1512 aa21.56■■□□□ 1.04
PCM1-204ENST00000517730 KIF27Q86VH2 1401 aa21.56■■□□□ 1.04
PCM1-204ENST00000517730 ARHGAP35Q9NRY4 1499 aa21.56■■□□□ 1.04
PCM1-204ENST00000517730 TIMELESSQ9UNS1 1208 aa21.56■■□□□ 1.04
PCM1-204ENST00000517730 CCER2I3L3R5 266 aa21.55■■□□□ 1.04
PCM1-204ENST00000517730 SETD5Q9C0A6 1442 aa21.55■■□□□ 1.04
PCM1-204ENST00000517730 RBM19Q9Y4C8 960 aaKnown RBP21.55■■□□□ 1.04
PCM1-204ENST00000517730 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms