RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
SDHA-218ENST00000515752 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
SDHA-218ENST00000515752 GRIN2BQ13224 1484 aa23.12■■□□□ 1.29
SDHA-218ENST00000515752 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
SDHA-218ENST00000515752 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.291e-7■■■■■ 30.9
SDHA-218ENST00000515752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.29
SDHA-218ENST00000515752 PBRM1Q86U86 1689 aa23.08■■□□□ 1.29
SDHA-218ENST00000515752 FMN1Q68DA7 1419 aa23.07■■□□□ 1.28
SDHA-218ENST00000515752 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
SDHA-218ENST00000515752 FYCO1Q9BQS8 1478 aa23.03■■□□□ 1.28
SDHA-218ENST00000515752 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
SDHA-218ENST00000515752 CASKIN1Q8WXD9 1431 aa23.02■■□□□ 1.28
SDHA-218ENST00000515752 RRBP1Q9P2E9 1410 aaKnown RBP23.02■■□□□ 1.28
SDHA-218ENST00000515752 FHOD3Q2V2M9 1422 aa23.02■■□□□ 1.28
SDHA-218ENST00000515752 SAMD9Q5K651 1589 aa23■■□□□ 1.27
SDHA-218ENST00000515752 THOC2Q8NI27 1593 aaKnown RBP23■■□□□ 1.27
SDHA-218ENST00000515752 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
SDHA-218ENST00000515752 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
SDHA-218ENST00000515752 LRRC9Q6ZRR7 1453 aa22.97■■□□□ 1.27
SDHA-218ENST00000515752 PCF11O94913 1555 aaKnown RBP22.97■■□□□ 1.27
SDHA-218ENST00000515752 ZNF608Q9ULD9 1512 aaPredicted RBP22.96■■□□□ 1.27
SDHA-218ENST00000515752 CFAP43Q8NDM7 1665 aa22.94■■□□□ 1.26
SDHA-218ENST00000515752 CCNB3Q8WWL7 1395 aa22.93■■□□□ 1.26
SDHA-218ENST00000515752 IQGAP2Q13576 1575 aa22.91■■□□□ 1.26
SDHA-218ENST00000515752 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.25
SDHA-218ENST00000515752 MAGI1Q96QZ7 1491 aaPredicted RBP22.88■■□□□ 1.25
SDHA-218ENST00000515752 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
SDHA-218ENST00000515752 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
SDHA-218ENST00000515752 KIAA0586Q9BVV6 1533 aa22.84■■□□□ 1.25
SDHA-218ENST00000515752 UGGT2Q9NYU1 1516 aa22.83■■□□□ 1.24
SDHA-218ENST00000515752 GRIN2AQ12879 1464 aa22.82■■□□□ 1.24
SDHA-218ENST00000515752 SYNJ2O15056 1496 aa22.78■■□□□ 1.24
SDHA-218ENST00000515752 CLSPNQ9HAW4 1339 aa22.78■■□□□ 1.24
SDHA-218ENST00000515752 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
SDHA-218ENST00000515752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.23
SDHA-218ENST00000515752 CCDC18Q5T9S5 1454 aa22.76■■□□□ 1.23
SDHA-218ENST00000515752 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
SDHA-218ENST00000515752 MTUS2Q5JR59 1369 aa22.74■■□□□ 1.23
SDHA-218ENST00000515752 HECW1Q76N89 1606 aa22.69■■□□□ 1.22
SDHA-218ENST00000515752 EHBP1L1Q8N3D4 1523 aa22.66■■□□□ 1.22
SDHA-218ENST00000515752 NUP160Q12769 1436 aa22.64■■□□□ 1.21
SDHA-218ENST00000515752 DISP1Q96F81 1524 aa22.64■■□□□ 1.21
SDHA-218ENST00000515752 KIAA0556O60303 1618 aa22.64■■□□□ 1.21
SDHA-218ENST00000515752 FAM50AQ14320 339 aaKnown RBP22.61■■□□□ 1.21
SDHA-218ENST00000515752 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
SDHA-218ENST00000515752 DHX57Q6P158 1386 aaKnown RBP22.6■■□□□ 1.21
SDHA-218ENST00000515752 EPRSP07814 1512 aaKnown RBP22.6■■□□□ 1.21
SDHA-218ENST00000515752 SUPT6HQ7KZ85 1726 aaKnown RBP22.6■■□□□ 1.21
SDHA-218ENST00000515752 LRRIQ1Q96JM4 1722 aa22.6■■□□□ 1.21
SDHA-218ENST00000515752 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
SDHA-218ENST00000515752 ITGAEP38570 1179 aa22.59■■□□□ 1.21
SDHA-218ENST00000515752 NCOA2Q15596 1464 aa22.59■■□□□ 1.21
SDHA-218ENST00000515752 FBLN2P98095 1184 aa22.58■■□□□ 1.21
SDHA-218ENST00000515752 CARMIL2Q6F5E8 1435 aa22.58■■□□□ 1.2
SDHA-218ENST00000515752 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
SDHA-218ENST00000515752 SETD5Q9C0A6 1442 aa22.57■■□□□ 1.2
SDHA-218ENST00000515752 ARHGEF11O15085 1522 aa22.54■■□□□ 1.2
SDHA-218ENST00000515752 JPH4Q96JJ6 628 aa22.53■■□□□ 1.2
SDHA-218ENST00000515752 RAB3GAP2Q9H2M9 1393 aa22.52■■□□□ 1.2
SDHA-218ENST00000515752 CDK11AQ9UQ88 783 aaPredicted RBP22.5■■□□□ 1.19
SDHA-218ENST00000515752 RAPGEF6Q8TEU7 1601 aa22.48■■□□□ 1.19
SDHA-218ENST00000515752 MAGI3Q5TCQ9 1506 aa22.48■■□□□ 1.19
SDHA-218ENST00000515752 MIA2Q96PC5 1412 aa22.45■■□□□ 1.18
SDHA-218ENST00000515752 NUP153P49790 1475 aaKnown RBP22.45■■□□□ 1.18
SDHA-218ENST00000515752 CDK13Q14004 1512 aaKnown RBP22.45■■□□□ 1.18
SDHA-218ENST00000515752 TCOF1Q13428 1488 aaKnown RBP22.42■■□□□ 1.18
SDHA-218ENST00000515752 PTPN23Q9H3S7 1636 aa22.4■■□□□ 1.18
SDHA-218ENST00000515752 ZNF316A6NFI3 1004 aaPredicted RBP22.39■■□□□ 1.17
SDHA-218ENST00000515752 HFM1A2PYH4 1435 aa22.37■■□□□ 1.17
SDHA-218ENST00000515752 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.17
SDHA-218ENST00000515752 PLB1Q6P1J6 1458 aa22.33■■□□□ 1.17
SDHA-218ENST00000515752 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
SDHA-218ENST00000515752 AKNAQ7Z591 1439 aa22.3■■□□□ 1.16
SDHA-218ENST00000515752 ARID3CA6NKF2 412 aa22.3■■□□□ 1.16
SDHA-218ENST00000515752 PTPRKQ15262 1439 aa22.3■■□□□ 1.16
SDHA-218ENST00000515752 PRG4Q92954 1404 aaPredicted RBP22.3■■□□□ 1.16
SDHA-218ENST00000515752 ABCA8O94911 1581 aa22.29■■□□□ 1.16
SDHA-218ENST00000515752 DIEXFQ68CQ4 756 aaKnown RBP22.29■■□□□ 1.16
SDHA-218ENST00000515752 MAPKBP1O60336 1514 aa22.28■■□□□ 1.16
SDHA-218ENST00000515752 TIMELESSQ9UNS1 1208 aa22.28■■□□□ 1.16
SDHA-218ENST00000515752 NAIPQ13075 1403 aa22.27■■□□□ 1.15
SDHA-218ENST00000515752 CHD1O14646 1710 aa22.26■■□□□ 1.15
SDHA-218ENST00000515752 PTPRGP23470 1445 aa22.26■■□□□ 1.15
SDHA-218ENST00000515752 UACAQ9BZF9 1416 aa22.24■■□□□ 1.15
SDHA-218ENST00000515752 PLEKHD1A6NEE1 506 aa22.23■■□□□ 1.15
SDHA-218ENST00000515752 ADCY10Q96PN6 1610 aa22.22■■□□□ 1.15
SDHA-218ENST00000515752 SHROOM2Q13796 1616 aa22.22■■□□□ 1.15
SDHA-218ENST00000515752 ROCK1Q13464 1354 aa22.19■■□□□ 1.14
SDHA-218ENST00000515752 ATP10BO94823 1461 aa22.19■■□□□ 1.14
SDHA-218ENST00000515752 ITSN2Q9NZM3 1697 aa22.18■■□□□ 1.14
SDHA-218ENST00000515752 CFDP1Q9UEE9 299 aaPredicted RBP22.15■■□□□ 1.14
SDHA-218ENST00000515752 GCC2Q8IWJ2 1684 aa22.15■■□□□ 1.14
SDHA-218ENST00000515752 DAPK1P53355 1430 aa22.15■■□□□ 1.14
SDHA-218ENST00000515752 GPATCH8Q9UKJ3 1502 aaKnown RBP22.14■■□□□ 1.14
SDHA-218ENST00000515752 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
SDHA-218ENST00000515752 KIF14Q15058 1648 aa22.12■■□□□ 1.13
SDHA-218ENST00000515752 ABCC5O15440 1437 aa22.11■■□□□ 1.13
SDHA-218ENST00000515752 RRP7BPQ9NSQ0 103 aa22.1■■□□□ 1.13
SDHA-218ENST00000515752 CHIC2Q9UKJ5 165 aa22.1■■□□□ 1.13
SDHA-218ENST00000515752 CLASP1Q7Z460 1538 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms