RNA–Protein interactions for RNA: ENST00000515725.5

COPG1-210, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-210ENST00000515725 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
COPG1-210ENST00000515725 ZNF777Q9ULD5 760 aaPredicted RBP13.73□□□□□ -0.21
COPG1-210ENST00000515725 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
COPG1-210ENST00000515725 KCNH8Q96L42 1107 aa13.71□□□□□ -0.21
COPG1-210ENST00000515725 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
COPG1-210ENST00000515725 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
COPG1-210ENST00000515725 VPS8Q8N3P4 1428 aa13.67□□□□□ -0.22
COPG1-210ENST00000515725 KIF21BO75037 1637 aa13.67□□□□□ -0.22
COPG1-210ENST00000515725 WDR62O43379 1518 aa13.65□□□□□ -0.22
COPG1-210ENST00000515725 ARHGAP35Q9NRY4 1499 aa13.65□□□□□ -0.22
COPG1-210ENST00000515725 CHIC2Q9UKJ5 165 aa13.64□□□□□ -0.23
COPG1-210ENST00000515725 MTUS2Q5JR59 1369 aa13.64□□□□□ -0.23
COPG1-210ENST00000515725 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
COPG1-210ENST00000515725 TARBP1Q13395 1621 aaKnown RBP13.61□□□□□ -0.23
COPG1-210ENST00000515725 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
COPG1-210ENST00000515725 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
COPG1-210ENST00000515725 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
COPG1-210ENST00000515725 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
COPG1-210ENST00000515725 CYB5RLQ6IPT4 315 aa13.58□□□□□ -0.24
COPG1-210ENST00000515725 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
COPG1-210ENST00000515725 CDK11AQ9UQ88 783 aaPredicted RBP13.54□□□□□ -0.24
COPG1-210ENST00000515725 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
COPG1-210ENST00000515725 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
COPG1-210ENST00000515725 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
COPG1-210ENST00000515725 PRG4Q92954 1404 aaPredicted RBP13.53□□□□□ -0.24
COPG1-210ENST00000515725 CARMIL2Q6F5E8 1435 aa13.51□□□□□ -0.25
COPG1-210ENST00000515725 NPM1P06748 294 aaKnown RBP eCLIP13.5□□□□□ -0.25
COPG1-210ENST00000515725 RRP7BPQ9NSQ0 103 aa13.5□□□□□ -0.25
COPG1-210ENST00000515725 PTPRGP23470 1445 aa13.49□□□□□ -0.25
COPG1-210ENST00000515725 HRCP23327 699 aa13.49□□□□□ -0.25
COPG1-210ENST00000515725 FMN1Q68DA7 1419 aa13.49□□□□□ -0.25
COPG1-210ENST00000515725 CUL7Q14999 1698 aa13.48□□□□□ -0.25
COPG1-210ENST00000515725 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
COPG1-210ENST00000515725 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
COPG1-210ENST00000515725 PBRM1Q86U86 1689 aa13.47□□□□□ -0.25
COPG1-210ENST00000515725 ADAMTS12P58397 1594 aa13.46□□□□□ -0.25
COPG1-210ENST00000515725 KIAA0586Q9BVV6 1533 aa13.46□□□□□ -0.26
COPG1-210ENST00000515725 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
COPG1-210ENST00000515725 PLB1Q6P1J6 1458 aa13.45□□□□□ -0.26
COPG1-210ENST00000515725 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
COPG1-210ENST00000515725 CFDP1Q9UEE9 299 aaPredicted RBP13.45□□□□□ -0.26
COPG1-210ENST00000515725 ZNF644Q9H582 1327 aaPredicted RBP13.44□□□□□ -0.26
COPG1-210ENST00000515725 CDK13Q14004 1512 aaKnown RBP13.41□□□□□ -0.26
COPG1-210ENST00000515725 WDR97A6NE52 1622 aa13.41□□□□□ -0.26
COPG1-210ENST00000515725 PHLDB1Q86UU1 1377 aa13.41□□□□□ -0.26
COPG1-210ENST00000515725 CCNB3Q8WWL7 1395 aa13.39□□□□□ -0.27
COPG1-210ENST00000515725 CEP170Q5SW79 1584 aa13.38□□□□□ -0.27
COPG1-210ENST00000515725 PCF11O94913 1555 aaKnown RBP13.37□□□□□ -0.27
COPG1-210ENST00000515725 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
COPG1-210ENST00000515725 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.27
COPG1-210ENST00000515725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.271e-8■■□□□ 12.6
COPG1-210ENST00000515725 CASKIN1Q8WXD9 1431 aa13.35□□□□□ -0.27
COPG1-210ENST00000515725 LRRC9Q6ZRR7 1453 aa13.33□□□□□ -0.27
COPG1-210ENST00000515725 DISP1Q96F81 1524 aa13.32□□□□□ -0.28
COPG1-210ENST00000515725 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
COPG1-210ENST00000515725 NUP160Q12769 1436 aa13.31□□□□□ -0.28
COPG1-210ENST00000515725 EFCAB5A4FU69 1503 aa13.3□□□□□ -0.28
COPG1-210ENST00000515725 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
COPG1-210ENST00000515725 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
COPG1-210ENST00000515725 FOXD1Q16676 465 aa13.3□□□□□ -0.28
COPG1-210ENST00000515725 ERCC6L2Q5T890 1561 aa13.3□□□□□ -0.28
COPG1-210ENST00000515725 TSPY4P0CV99 314 aa13.3□□□□□ -0.28
COPG1-210ENST00000515725 TSPY10P0CW01 314 aa13.3□□□□□ -0.28
COPG1-210ENST00000515725 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
COPG1-210ENST00000515725 CHD1O14646 1710 aa13.28□□□□□ -0.28
COPG1-210ENST00000515725 EPRSP07814 1512 aaKnown RBP13.28□□□□□ -0.28
COPG1-210ENST00000515725 FYCO1Q9BQS8 1478 aa13.28□□□□□ -0.28
COPG1-210ENST00000515725 SIN3AQ96ST3 1273 aa13.26□□□□□ -0.29
COPG1-210ENST00000515725 TIAM1Q13009 1591 aa13.26□□□□□ -0.29
COPG1-210ENST00000515725 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
COPG1-210ENST00000515725 MYT1Q01538 1121 aa13.26□□□□□ -0.29
COPG1-210ENST00000515725 ZNF326Q5BKZ1 582 aaKnown RBP13.25□□□□□ -0.29
COPG1-210ENST00000515725 ZEB1P37275 1124 aaPredicted RBP13.24□□□□□ -0.29
COPG1-210ENST00000515725 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
COPG1-210ENST00000515725 NUP153P49790 1475 aaKnown RBP13.23□□□□□ -0.29
COPG1-210ENST00000515725 UACAQ9BZF9 1416 aa13.23□□□□□ -0.29
COPG1-210ENST00000515725 UGGT2Q9NYU1 1516 aa13.22□□□□□ -0.29
COPG1-210ENST00000515725 CCDC18Q5T9S5 1454 aa13.22□□□□□ -0.29
COPG1-210ENST00000515725 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
COPG1-210ENST00000515725 FAM69CQ0P6D2 419 aa13.2□□□□□ -0.3
COPG1-210ENST00000515725 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
COPG1-210ENST00000515725 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
COPG1-210ENST00000515725 FGD6Q6ZV73 1430 aa13.19□□□□□ -0.3
COPG1-210ENST00000515725 ATP10BO94823 1461 aa13.19□□□□□ -0.3
COPG1-210ENST00000515725 CNGB1Q14028 1251 aaPredicted RBP13.19□□□□□ -0.3
COPG1-210ENST00000515725 ARHGEF11O15085 1522 aa13.19□□□□□ -0.3
COPG1-210ENST00000515725 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
COPG1-210ENST00000515725 SAMD9Q5K651 1589 aa13.17□□□□□ -0.3
COPG1-210ENST00000515725 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
COPG1-210ENST00000515725 EFCAB2Q5VUJ9 269 aa13.16□□□□□ -0.3
COPG1-210ENST00000515725 HECW1Q76N89 1606 aa13.16□□□□□ -0.3
COPG1-210ENST00000515725 MAGI3Q5TCQ9 1506 aa13.15□□□□□ -0.3
COPG1-210ENST00000515725 MLECQ14165 292 aa13.15□□□□□ -0.3
COPG1-210ENST00000515725 TROQ12816 1431 aaPredicted RBP13.15□□□□□ -0.3
COPG1-210ENST00000515725 POLR3GLQ9BT43 218 aa13.14□□□□□ -0.31
COPG1-210ENST00000515725 RAPGEF6Q8TEU7 1601 aa13.13□□□□□ -0.31
COPG1-210ENST00000515725 RAPGEF3O95398 923 aa13.13□□□□□ -0.31
COPG1-210ENST00000515725 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
COPG1-210ENST00000515725 GGT6Q6P531 493 aa13.11□□□□□ -0.31
COPG1-210ENST00000515725 RGL3Q3MIN7 710 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms