RNA–Protein interactions for RNA: ENST00000515725.5

COPG1-210, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-210ENST00000515725 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
COPG1-210ENST00000515725 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
COPG1-210ENST00000515725 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
COPG1-210ENST00000515725 ABCC9O60706 1549 aa16.73■□□□□ 0.27
COPG1-210ENST00000515725 CCDC180Q9P1Z9 1646 aa16.53■□□□□ 0.24
COPG1-210ENST00000515725 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
COPG1-210ENST00000515725 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
COPG1-210ENST00000515725 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.176e-9■■□□□ 12
COPG1-210ENST00000515725 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
COPG1-210ENST00000515725 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
COPG1-210ENST00000515725 NACADO15069 1562 aa15.68■□□□□ 0.1
COPG1-210ENST00000515725 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
COPG1-210ENST00000515725 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
COPG1-210ENST00000515725 CECR2Q9BXF3 1484 aa15.47■□□□□ 0.07
COPG1-210ENST00000515725 MYO15BQ96JP2 1530 aa15.39■□□□□ 0.05
COPG1-210ENST00000515725 FAM9AQ8IZU1 332 aaPredicted RBP15.32■□□□□ 0.04
COPG1-210ENST00000515725 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
COPG1-210ENST00000515725 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
COPG1-210ENST00000515725 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
COPG1-210ENST00000515725 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
COPG1-210ENST00000515725 UNC13AQ9UPW8 1703 aa15.13■□□□□ 0.01
COPG1-210ENST00000515725 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
COPG1-210ENST00000515725 WIZO95785 1651 aa15.07■□□□□ 0
COPG1-210ENST00000515725 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
COPG1-210ENST00000515725 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
COPG1-210ENST00000515725 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
COPG1-210ENST00000515725 RANGAP1P46060 587 aaPredicted RBP14.94□□□□□ -0.02
COPG1-210ENST00000515725 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
COPG1-210ENST00000515725 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
COPG1-210ENST00000515725 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
COPG1-210ENST00000515725 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
COPG1-210ENST00000515725 CCDC88BA6NC98 1476 aa14.83□□□□□ -0.04
COPG1-210ENST00000515725 TTBK1Q5TCY1 1321 aaPredicted RBP14.74□□□□□ -0.05
COPG1-210ENST00000515725 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
COPG1-210ENST00000515725 TOP2AP11388 1531 aaKnown RBP14.7□□□□□ -0.06
COPG1-210ENST00000515725 CC2D2AQ9P2K1 1620 aa14.7□□□□□ -0.06
COPG1-210ENST00000515725 UBTFP17480 764 aaKnown RBP14.69□□□□□ -0.06
COPG1-210ENST00000515725 PPARGC1BQ86YN6 1023 aaKnown RBP14.67□□□□□ -0.06
COPG1-210ENST00000515725 ABCC8Q09428 1581 aa14.66□□□□□ -0.06
COPG1-210ENST00000515725 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
COPG1-210ENST00000515725 NESP48681 1621 aa14.55□□□□□ -0.08
COPG1-210ENST00000515725 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.095e-6■■■■■ 46
COPG1-210ENST00000515725 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
COPG1-210ENST00000515725 SOGA1O94964 1423 aa14.47□□□□□ -0.09
COPG1-210ENST00000515725 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
COPG1-210ENST00000515725 ATP1B4Q9UN42 357 aaPredicted RBP14.44□□□□□ -0.1
COPG1-210ENST00000515725 FBLN2P98095 1184 aa14.44□□□□□ -0.1
COPG1-210ENST00000515725 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
COPG1-210ENST00000515725 RUSC2Q8N2Y8 1516 aa14.4□□□□□ -0.1
COPG1-210ENST00000515725 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
COPG1-210ENST00000515725 ERCC6Q03468 1493 aa14.37□□□□□ -0.11
COPG1-210ENST00000515725 P3H3Q8IVL6 736 aa14.36□□□□□ -0.11
COPG1-210ENST00000515725 PCGF6Q9BYE7 350 aa14.36□□□□□ -0.11
COPG1-210ENST00000515725 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
COPG1-210ENST00000515725 CFTRP13569 1480 aa14.31□□□□□ -0.12
COPG1-210ENST00000515725 TDRD9Q8NDG6 1382 aaKnown RBP14.3□□□□□ -0.12
COPG1-210ENST00000515725 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.13
COPG1-210ENST00000515725 ARID3CA6NKF2 412 aa14.25□□□□□ -0.13
COPG1-210ENST00000515725 SYNJ1O43426 1573 aa14.25□□□□□ -0.13
COPG1-210ENST00000515725 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
COPG1-210ENST00000515725 CUX2O14529 1486 aa14.24□□□□□ -0.13
COPG1-210ENST00000515725 APLP2Q06481 763 aa14.23□□□□□ -0.13
COPG1-210ENST00000515725 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
COPG1-210ENST00000515725 CUX1P39880 1505 aa14.18□□□□□ -0.14
COPG1-210ENST00000515725 FGD5Q6ZNL6 1462 aa14.17□□□□□ -0.14
COPG1-210ENST00000515725 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
COPG1-210ENST00000515725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
COPG1-210ENST00000515725 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
COPG1-210ENST00000515725 CHMP7Q8WUX9 453 aaPredicted RBP14.1□□□□□ -0.15
COPG1-210ENST00000515725 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.152e-7■■■■■ 37.2
COPG1-210ENST00000515725 RAPGEF2Q9Y4G8 1499 aa14.08□□□□□ -0.16
COPG1-210ENST00000515725 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
COPG1-210ENST00000515725 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
COPG1-210ENST00000515725 ITGAEP38570 1179 aa14.06□□□□□ -0.16
COPG1-210ENST00000515725 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
COPG1-210ENST00000515725 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
COPG1-210ENST00000515725 CEP162Q5TB80 1403 aa14.03□□□□□ -0.16
COPG1-210ENST00000515725 IGF1RP08069 1367 aa14.02□□□□□ -0.16
COPG1-210ENST00000515725 LAMC3Q9Y6N6 1575 aa14.02□□□□□ -0.16
COPG1-210ENST00000515725 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
COPG1-210ENST00000515725 GOLGA3Q08378 1498 aa14.01□□□□□ -0.17
COPG1-210ENST00000515725 EEA1Q15075 1411 aa13.99□□□□□ -0.17
COPG1-210ENST00000515725 CLIP1P30622 1438 aa13.99□□□□□ -0.17
COPG1-210ENST00000515725 KIF21AQ7Z4S6 1674 aa13.97□□□□□ -0.17
COPG1-210ENST00000515725 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.18
COPG1-210ENST00000515725 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
COPG1-210ENST00000515725 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
COPG1-210ENST00000515725 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
COPG1-210ENST00000515725 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
COPG1-210ENST00000515725 DNMBPQ6XZF7 1577 aa13.92□□□□□ -0.18
COPG1-210ENST00000515725 BIVM-ERCC5R4GMW8 1640 aa13.83□□□□□ -0.2
COPG1-210ENST00000515725 FAM50AQ14320 339 aaKnown RBP13.83□□□□□ -0.2
COPG1-210ENST00000515725 KANK4Q5T7N3 995 aaPredicted RBP13.81□□□□□ -0.2
COPG1-210ENST00000515725 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
COPG1-210ENST00000515725 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
COPG1-210ENST00000515725 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
COPG1-210ENST00000515725 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
COPG1-210ENST00000515725 CCER1Q8TC90 406 aaPredicted RBP13.76□□□□□ -0.21
COPG1-210ENST00000515725 JPH4Q96JJ6 628 aa13.76□□□□□ -0.21
COPG1-210ENST00000515725 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms