RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 CTTNBP2Q8WZ74 1663 aa31.41■■■□□ 2.62
TRIO-223ENST00000515710 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
TRIO-223ENST00000515710 MAGI1Q96QZ7 1491 aaPredicted RBP31.31■■■□□ 2.6
TRIO-223ENST00000515710 PPARGC1BQ86YN6 1023 aaKnown RBP31.29■■■□□ 2.6
TRIO-223ENST00000515710 EFCAB5A4FU69 1503 aa31.28■■■□□ 2.6
TRIO-223ENST00000515710 APLP2Q06481 763 aa31.26■■■□□ 2.59
TRIO-223ENST00000515710 SYNJ2O15056 1496 aa31.19■■■□□ 2.58
TRIO-223ENST00000515710 GRIN2AQ12879 1464 aa31.19■■■□□ 2.58
TRIO-223ENST00000515710 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.57
TRIO-223ENST00000515710 IQGAP2Q13576 1575 aa31.12■■■□□ 2.57
TRIO-223ENST00000515710 SAMD9Q5K651 1589 aa31.11■■■□□ 2.57
TRIO-223ENST00000515710 P3H3Q8IVL6 736 aa31.1■■■□□ 2.57
TRIO-223ENST00000515710 KIAA0586Q9BVV6 1533 aa31.09■■■□□ 2.57
TRIO-223ENST00000515710 FHOD3Q2V2M9 1422 aa31.08■■■□□ 2.57
TRIO-223ENST00000515710 FMN1Q68DA7 1419 aa31.02■■■□□ 2.56
TRIO-223ENST00000515710 TTBK1Q5TCY1 1321 aaPredicted RBP31.01■■■□□ 2.56
TRIO-223ENST00000515710 UGGT2Q9NYU1 1516 aa31■■■□□ 2.55
TRIO-223ENST00000515710 FBLN2P98095 1184 aa31■■■□□ 2.55
TRIO-223ENST00000515710 MAP3K1Q13233 1512 aa30.99■■■□□ 2.55
TRIO-223ENST00000515710 NUP160Q12769 1436 aa30.97■■■□□ 2.55
TRIO-223ENST00000515710 CEP170Q5SW79 1584 aa30.95■■■□□ 2.55
TRIO-223ENST00000515710 CASKIN1Q8WXD9 1431 aa30.95■■■□□ 2.54
TRIO-223ENST00000515710 FYCO1Q9BQS8 1478 aa30.93■■■□□ 2.54
TRIO-223ENST00000515710 PCF11O94913 1555 aaKnown RBP30.92■■■□□ 2.54
TRIO-223ENST00000515710 KANK4Q5T7N3 995 aaPredicted RBP30.88■■■□□ 2.53
TRIO-223ENST00000515710 TIAM1Q13009 1591 aa30.87■■■□□ 2.53
TRIO-223ENST00000515710 DISP1Q96F81 1524 aa30.81■■■□□ 2.52
TRIO-223ENST00000515710 ATP1B4Q9UN42 357 aaPredicted RBP30.81■■■□□ 2.52
TRIO-223ENST00000515710 KIAA0556O60303 1618 aa30.8■■■□□ 2.52
TRIO-223ENST00000515710 CFAP43Q8NDM7 1665 aa30.78■■■□□ 2.52
TRIO-223ENST00000515710 JPH4Q96JJ6 628 aa30.77■■■□□ 2.52
TRIO-223ENST00000515710 LRRC9Q6ZRR7 1453 aa30.76■■■□□ 2.51
TRIO-223ENST00000515710 CHD1O14646 1710 aa30.75■■■□□ 2.51
TRIO-223ENST00000515710 CARMIL2Q6F5E8 1435 aa30.72■■■□□ 2.51
TRIO-223ENST00000515710 HECW1Q76N89 1606 aa30.65■■■□□ 2.5
TRIO-223ENST00000515710 CCDC18Q5T9S5 1454 aa30.63■■■□□ 2.49
TRIO-223ENST00000515710 HRCP23327 699 aa30.6■■■□□ 2.49
TRIO-223ENST00000515710 RRBP1Q9P2E9 1410 aaKnown RBP30.59■■■□□ 2.49
TRIO-223ENST00000515710 LRRIQ1Q96JM4 1722 aa30.58■■■□□ 2.49
TRIO-223ENST00000515710 PRG4Q92954 1404 aaPredicted RBP30.53■■■□□ 2.48
TRIO-223ENST00000515710 MTUS2Q5JR59 1369 aa30.53■■■□□ 2.48
TRIO-223ENST00000515710 EPRSP07814 1512 aaKnown RBP30.53■■■□□ 2.48
TRIO-223ENST00000515710 RAPGEF6Q8TEU7 1601 aa30.52■■■□□ 2.48
TRIO-223ENST00000515710 SHROOM2Q13796 1616 aa30.51■■■□□ 2.47
TRIO-223ENST00000515710 CCNB3Q8WWL7 1395 aa30.48■■■□□ 2.47
TRIO-223ENST00000515710 EHBP1L1Q8N3D4 1523 aa30.47■■■□□ 2.47
TRIO-223ENST00000515710 PHLDB1Q86UU1 1377 aa30.46■■■□□ 2.47
TRIO-223ENST00000515710 CLASP1Q7Z460 1538 aa30.45■■■□□ 2.47
TRIO-223ENST00000515710 NUP153P49790 1475 aaKnown RBP30.44■■■□□ 2.46
TRIO-223ENST00000515710 HNRNPUL2Q1KMD3 747 aaKnown RBP30.42■■■□□ 2.46
TRIO-223ENST00000515710 CDK13Q14004 1512 aaKnown RBP30.41■■■□□ 2.46
TRIO-223ENST00000515710 PLB1Q6P1J6 1458 aa30.4■■■□□ 2.46
TRIO-223ENST00000515710 PTPRGP23470 1445 aa30.38■■■□□ 2.45
TRIO-223ENST00000515710 SUPT6HQ7KZ85 1726 aaKnown RBP30.37■■■□□ 2.45
TRIO-223ENST00000515710 MAGI3Q5TCQ9 1506 aa30.37■■■□□ 2.45
TRIO-223ENST00000515710 ABCA8O94911 1581 aa30.36■■■□□ 2.45
TRIO-223ENST00000515710 NCOA2Q15596 1464 aa30.34■■■□□ 2.45
TRIO-223ENST00000515710 CDK11AQ9UQ88 783 aaPredicted RBP30.34■■■□□ 2.45
TRIO-223ENST00000515710 ZEB1P37275 1124 aaPredicted RBP30.31■■■□□ 2.44
TRIO-223ENST00000515710 ARHGEF11O15085 1522 aa30.31■■■□□ 2.44
TRIO-223ENST00000515710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.3■■■□□ 2.44
TRIO-223ENST00000515710 ARID3CA6NKF2 412 aa30.3■■■□□ 2.44
TRIO-223ENST00000515710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.27■■■□□ 2.44
TRIO-223ENST00000515710 FGD6Q6ZV73 1430 aa30.25■■■□□ 2.43
TRIO-223ENST00000515710 MYOM3Q5VTT5 1437 aa30.25■■■□□ 2.43
TRIO-223ENST00000515710 ERCC6L2Q5T890 1561 aa30.22■■■□□ 2.43
TRIO-223ENST00000515710 FAM50AQ14320 339 aaKnown RBP30.22■■■□□ 2.43
TRIO-223ENST00000515710 UACAQ9BZF9 1416 aa30.21■■■□□ 2.43
TRIO-223ENST00000515710 CCER1Q8TC90 406 aaPredicted RBP30.2■■■□□ 2.43
TRIO-223ENST00000515710 TROQ12816 1431 aaPredicted RBP30.19■■■□□ 2.42
TRIO-223ENST00000515710 ATP10BO94823 1461 aa30.18■■■□□ 2.42
TRIO-223ENST00000515710 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
TRIO-223ENST00000515710 ITGAEP38570 1179 aa30.13■■■□□ 2.41
TRIO-223ENST00000515710 PLEKHD1A6NEE1 506 aa30.12■■■□□ 2.41
TRIO-223ENST00000515710 MIA2Q96PC5 1412 aa30.12■■■□□ 2.41
TRIO-223ENST00000515710 ABCC2Q92887 1545 aa30.09■■■□□ 2.41
TRIO-223ENST00000515710 ADCY10Q96PN6 1610 aa30.08■■■□□ 2.41
TRIO-223ENST00000515710 TCOF1Q13428 1488 aaKnown RBP30.07■■■□□ 2.4
TRIO-223ENST00000515710 PTPN23Q9H3S7 1636 aa30.07■■■□□ 2.4
TRIO-223ENST00000515710 UHRF1BP1LA0JNW5 1464 aa30.05■■■□□ 2.4
TRIO-223ENST00000515710 KIF14Q15058 1648 aa29.96■■■□□ 2.39
TRIO-223ENST00000515710 SETD5Q9C0A6 1442 aa29.96■■■□□ 2.39
TRIO-223ENST00000515710 ITSN2Q9NZM3 1697 aa29.93■■■□□ 2.38
TRIO-223ENST00000515710 GPATCH8Q9UKJ3 1502 aaKnown RBP29.92■■■□□ 2.38
TRIO-223ENST00000515710 ABCC10Q5T3U5 1492 aa29.91■■■□□ 2.38
TRIO-223ENST00000515710 KDM5BQ9UGL1 1544 aa29.9■■■□□ 2.38
TRIO-223ENST00000515710 RAB3GAP2Q9H2M9 1393 aa29.9■■■□□ 2.38
TRIO-223ENST00000515710 PTPRKQ15262 1439 aa29.88■■■□□ 2.37
TRIO-223ENST00000515710 CFDP1Q9UEE9 299 aaPredicted RBP29.87■■■□□ 2.37
TRIO-223ENST00000515710 DHX57Q6P158 1386 aaKnown RBP29.84■■■□□ 2.37
TRIO-223ENST00000515710 ZCCHC11Q5TAX3 1644 aaKnown RBP29.84■■■□□ 2.37
TRIO-223ENST00000515710 CLSPNQ9HAW4 1339 aa29.83■■■□□ 2.37
TRIO-223ENST00000515710 HFM1A2PYH4 1435 aa29.81■■■□□ 2.36
TRIO-223ENST00000515710 CDC42BPAQ5VT25 1732 aa29.78■■■□□ 2.36
TRIO-223ENST00000515710 CAMSAP2Q08AD1 1489 aa29.77■■■□□ 2.36
TRIO-223ENST00000515710 ZNF644Q9H582 1327 aaPredicted RBP29.77■■■□□ 2.36
TRIO-223ENST00000515710 DAPK1P53355 1430 aa29.76■■■□□ 2.35
TRIO-223ENST00000515710 AKNAQ7Z591 1439 aa29.76■■■□□ 2.35
TRIO-223ENST00000515710 DNMT1P26358 1616 aaKnown RBP29.75■■■□□ 2.35
TRIO-223ENST00000515710 ABCC5O15440 1437 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms