RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
PDCD6-211ENST00000515587 CSRNP3Q8WYN3 585 aa24.99■■□□□ 1.59
PDCD6-211ENST00000515587 RAPGEF2Q9Y4G8 1499 aa24.96■■□□□ 1.59
PDCD6-211ENST00000515587 ILDR1Q86SU0 546 aaPredicted RBP24.92■■□□□ 1.58
PDCD6-211ENST00000515587 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
PDCD6-211ENST00000515587 PRXQ9BXM0 1461 aa24.9■■□□□ 1.58
PDCD6-211ENST00000515587 ERCC6L2Q5T890 1561 aa24.9■■□□□ 1.58
PDCD6-211ENST00000515587 NUP160Q12769 1436 aa24.9■■□□□ 1.58
PDCD6-211ENST00000515587 KIF21BO75037 1637 aa24.83■■□□□ 1.56
PDCD6-211ENST00000515587 KIAA0586Q9BVV6 1533 aa24.78■■□□□ 1.56
PDCD6-211ENST00000515587 CTTNBP2Q8WZ74 1663 aa24.77■■□□□ 1.56
PDCD6-211ENST00000515587 KDM4FA0A1W2PPD8 638 aa24.74■■□□□ 1.55
PDCD6-211ENST00000515587 IQGAP2Q13576 1575 aa24.72■■□□□ 1.55
PDCD6-211ENST00000515587 KIF13AQ9H1H9 1805 aa24.72■■□□□ 1.55
PDCD6-211ENST00000515587 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
PDCD6-211ENST00000515587 GOLGA3Q08378 1498 aa24.7■■□□□ 1.54
PDCD6-211ENST00000515587 JPH4Q96JJ6 628 aa24.67■■□□□ 1.54
PDCD6-211ENST00000515587 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
PDCD6-211ENST00000515587 FAM69CQ0P6D2 419 aa24.63■■□□□ 1.53
PDCD6-211ENST00000515587 UBTFP17480 764 aaKnown RBP24.62■■□□□ 1.53
PDCD6-211ENST00000515587 PRG4Q92954 1404 aaPredicted RBP24.61■■□□□ 1.53
PDCD6-211ENST00000515587 UGGT2Q9NYU1 1516 aa24.56■■□□□ 1.52
PDCD6-211ENST00000515587 CARMIL2Q6F5E8 1435 aa24.55■■□□□ 1.52
PDCD6-211ENST00000515587 ABCC10Q5T3U5 1492 aa24.55■■□□□ 1.52
PDCD6-211ENST00000515587 KIAA0556O60303 1618 aa24.46■■□□□ 1.51
PDCD6-211ENST00000515587 DISP1Q96F81 1524 aa24.46■■□□□ 1.51
PDCD6-211ENST00000515587 KDM6BO15054 1643 aa24.45■■□□□ 1.5
PDCD6-211ENST00000515587 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
PDCD6-211ENST00000515587 DIP2BQ9P265 1576 aa24.43■■□□□ 1.5
PDCD6-211ENST00000515587 NPM1P06748 294 aaKnown RBP eCLIP24.42■■□□□ 1.5
PDCD6-211ENST00000515587 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
PDCD6-211ENST00000515587 SAMD9Q5K651 1589 aa24.41■■□□□ 1.5
PDCD6-211ENST00000515587 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
PDCD6-211ENST00000515587 EFCAB5A4FU69 1503 aa24.39■■□□□ 1.49
PDCD6-211ENST00000515587 PTPRGP23470 1445 aa24.36■■□□□ 1.49
PDCD6-211ENST00000515587 TTBK1Q5TCY1 1321 aaPredicted RBP24.35■■□□□ 1.49
PDCD6-211ENST00000515587 LOC105371045A0A1W2PR82 267 aa24.35■■□□□ 1.49
PDCD6-211ENST00000515587 P3H3Q8IVL6 736 aa24.33■■□□□ 1.49
PDCD6-211ENST00000515587 ADCY10Q96PN6 1610 aa24.29■■□□□ 1.48
PDCD6-211ENST00000515587 TSPOAP1O95153 1857 aa24.28■■□□□ 1.48
PDCD6-211ENST00000515587 FHOD3Q2V2M9 1422 aa24.26■■□□□ 1.47
PDCD6-211ENST00000515587 ADGRL1O94910 1474 aa24.26■■□□□ 1.47
PDCD6-211ENST00000515587 CLIP1P30622 1438 aa24.25■■□□□ 1.47
PDCD6-211ENST00000515587 ARHGAP35Q9NRY4 1499 aa24.25■■□□□ 1.47
PDCD6-211ENST00000515587 CEP162Q5TB80 1403 aa24.21■■□□□ 1.47
PDCD6-211ENST00000515587 UACAQ9BZF9 1416 aa24.21■■□□□ 1.47
PDCD6-211ENST00000515587 HECW2Q9P2P5 1572 aa24.2■■□□□ 1.46
PDCD6-211ENST00000515587 ABCC2Q92887 1545 aa24.17■■□□□ 1.46
PDCD6-211ENST00000515587 UHRF1BP1LA0JNW5 1464 aa24.17■■□□□ 1.46
PDCD6-211ENST00000515587 ABCA8O94911 1581 aa24.16■■□□□ 1.46
PDCD6-211ENST00000515587 PLB1Q6P1J6 1458 aa24.15■■□□□ 1.46
PDCD6-211ENST00000515587 FMN1Q68DA7 1419 aa24.15■■□□□ 1.46
PDCD6-211ENST00000515587 RAPGEF6Q8TEU7 1601 aa24.13■■□□□ 1.45
PDCD6-211ENST00000515587 COL17A1Q9UMD9 1497 aaPredicted RBP24.06■■□□□ 1.44
PDCD6-211ENST00000515587 ZCCHC11Q5TAX3 1644 aaKnown RBP24.04■■□□□ 1.44
PDCD6-211ENST00000515587 KDM5BQ9UGL1 1544 aa24.04■■□□□ 1.44
PDCD6-211ENST00000515587 PPRC1Q5VV67 1664 aaKnown RBP24.03■■□□□ 1.44
PDCD6-211ENST00000515587 HECW1Q76N89 1606 aa24.02■■□□□ 1.44
PDCD6-211ENST00000515587 FBXO41Q8TF61 875 aa24.01■■□□□ 1.43
PDCD6-211ENST00000515587 ATP1B4Q9UN42 357 aaPredicted RBP24■■□□□ 1.43
PDCD6-211ENST00000515587 ASXL2Q76L83 1435 aa23.99■■□□□ 1.43
PDCD6-211ENST00000515587 NUP153P49790 1475 aaKnown RBP23.99■■□□□ 1.43
PDCD6-211ENST00000515587 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
PDCD6-211ENST00000515587 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
PDCD6-211ENST00000515587 FYCO1Q9BQS8 1478 aa23.96■■□□□ 1.43
PDCD6-211ENST00000515587 ARID3CA6NKF2 412 aa23.96■■□□□ 1.43
PDCD6-211ENST00000515587 GLI2P10070 1586 aa23.95■■□□□ 1.43
PDCD6-211ENST00000515587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.95■■□□□ 1.42
PDCD6-211ENST00000515587 HNRNPUL2Q1KMD3 747 aaKnown RBP23.95■■□□□ 1.42
PDCD6-211ENST00000515587 ATP10BO94823 1461 aa23.94■■□□□ 1.42
PDCD6-211ENST00000515587 VPS8Q8N3P4 1428 aa23.9■■□□□ 1.42
PDCD6-211ENST00000515587 EPRSP07814 1512 aaKnown RBP23.89■■□□□ 1.42
PDCD6-211ENST00000515587 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
PDCD6-211ENST00000515587 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
PDCD6-211ENST00000515587 CDK13Q14004 1512 aaKnown RBP23.87■■□□□ 1.41
PDCD6-211ENST00000515587 WDR7Q9Y4E6 1490 aa23.85■■□□□ 1.41
PDCD6-211ENST00000515587 CDK11AQ9UQ88 783 aaPredicted RBP23.83■■□□□ 1.41
PDCD6-211ENST00000515587 PLEKHD1A6NEE1 506 aa23.82■■□□□ 1.4
PDCD6-211ENST00000515587 TEX14Q8IWB6 1497 aa23.8■■□□□ 1.4
PDCD6-211ENST00000515587 MAP3K4Q9Y6R4 1608 aa23.78■■□□□ 1.4
PDCD6-211ENST00000515587 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
PDCD6-211ENST00000515587 CFAP43Q8NDM7 1665 aa23.73■■□□□ 1.39
PDCD6-211ENST00000515587 APLP2Q06481 763 aa23.71■■□□□ 1.39
PDCD6-211ENST00000515587 TROQ12816 1431 aaPredicted RBP23.69■■□□□ 1.38
PDCD6-211ENST00000515587 TIAM1Q13009 1591 aa23.69■■□□□ 1.38
PDCD6-211ENST00000515587 KIF14Q15058 1648 aa23.67■■□□□ 1.38
PDCD6-211ENST00000515587 MAP3K1Q13233 1512 aa23.66■■□□□ 1.38
PDCD6-211ENST00000515587 ABCA9Q8IUA7 1624 aa23.66■■□□□ 1.38
PDCD6-211ENST00000515587 MTUS2Q5JR59 1369 aa23.65■■□□□ 1.38
PDCD6-211ENST00000515587 LMTK3Q96Q04 1460 aa23.64■■□□□ 1.38
PDCD6-211ENST00000515587 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.37
PDCD6-211ENST00000515587 EHBP1L1Q8N3D4 1523 aa23.63■■□□□ 1.37
PDCD6-211ENST00000515587 CD109Q6YHK3 1445 aa23.6■■□□□ 1.37
PDCD6-211ENST00000515587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.6■■□□□ 1.37
PDCD6-211ENST00000515587 TTC37Q6PGP7 1564 aa23.58■■□□□ 1.37
PDCD6-211ENST00000515587 LRRC9Q6ZRR7 1453 aa23.56■■□□□ 1.36
PDCD6-211ENST00000515587 MYO5CQ9NQX4 1742 aa23.56■■□□□ 1.36
PDCD6-211ENST00000515587 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
PDCD6-211ENST00000515587 PTPRMP28827 1452 aa23.54■■□□□ 1.36
PDCD6-211ENST00000515587 CFAP74Q9C0B2 1584 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms