RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CHMP7Q8WUX9 453 aaPredicted RBP16.19■□□□□ 0.18
SNF8-214ENST00000515174 UBTFP17480 764 aaKnown RBP16.18■□□□□ 0.18
SNF8-214ENST00000515174 IGF1RP08069 1367 aa16.17■□□□□ 0.18
SNF8-214ENST00000515174 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
SNF8-214ENST00000515174 CEP162Q5TB80 1403 aa16.16■□□□□ 0.18
SNF8-214ENST00000515174 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
SNF8-214ENST00000515174 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
SNF8-214ENST00000515174 CARMIL1Q5VZK9 1371 aa16.09■□□□□ 0.17
SNF8-214ENST00000515174 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
SNF8-214ENST00000515174 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
SNF8-214ENST00000515174 TRIM26Q12899 539 aaPredicted RBP16.07■□□□□ 0.16
SNF8-214ENST00000515174 SYNJ2O15056 1496 aa16.06■□□□□ 0.16
SNF8-214ENST00000515174 GRIN2AQ12879 1464 aa16.04■□□□□ 0.16
SNF8-214ENST00000515174 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
SNF8-214ENST00000515174 CLIP1P30622 1438 aa16.03■□□□□ 0.16
SNF8-214ENST00000515174 IQGAP2Q13576 1575 aa15.96■□□□□ 0.15
SNF8-214ENST00000515174 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
SNF8-214ENST00000515174 VPS8Q8N3P4 1428 aa15.94■□□□□ 0.14
SNF8-214ENST00000515174 NUP160Q12769 1436 aa15.93■□□□□ 0.14
SNF8-214ENST00000515174 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
SNF8-214ENST00000515174 SHROOM2Q13796 1616 aa15.86■□□□□ 0.13
SNF8-214ENST00000515174 EFCAB5A4FU69 1503 aa15.86■□□□□ 0.13
SNF8-214ENST00000515174 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
SNF8-214ENST00000515174 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
SNF8-214ENST00000515174 ERCC6L2Q5T890 1561 aa15.84■□□□□ 0.13
SNF8-214ENST00000515174 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
SNF8-214ENST00000515174 UGGT2Q9NYU1 1516 aa15.84■□□□□ 0.13
SNF8-214ENST00000515174 RANGAP1P46060 587 aaPredicted RBP15.78■□□□□ 0.12
SNF8-214ENST00000515174 APLP2Q06481 763 aa15.77■□□□□ 0.12
SNF8-214ENST00000515174 PCF11O94913 1555 aaKnown RBP15.77■□□□□ 0.11
SNF8-214ENST00000515174 DISP1Q96F81 1524 aa15.76■□□□□ 0.11
SNF8-214ENST00000515174 FHOD3Q2V2M9 1422 aa15.75■□□□□ 0.11
SNF8-214ENST00000515174 MAP3K1Q13233 1512 aa15.74■□□□□ 0.11
SNF8-214ENST00000515174 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
SNF8-214ENST00000515174 LRRIQ1Q96JM4 1722 aa15.73■□□□□ 0.11
SNF8-214ENST00000515174 FAM69CQ0P6D2 419 aa15.72■□□□□ 0.11
SNF8-214ENST00000515174 PRG4Q92954 1404 aaPredicted RBP15.71■□□□□ 0.11
SNF8-214ENST00000515174 HRCP23327 699 aa15.7■□□□□ 0.1
SNF8-214ENST00000515174 CFAP43Q8NDM7 1665 aa15.7■□□□□ 0.1
SNF8-214ENST00000515174 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
SNF8-214ENST00000515174 JPH4Q96JJ6 628 aa15.68■□□□□ 0.1
SNF8-214ENST00000515174 KIF13AQ9H1H9 1805 aa15.67■□□□□ 0.1
SNF8-214ENST00000515174 FMN1Q68DA7 1419 aa15.65■□□□□ 0.1
SNF8-214ENST00000515174 RAPGEF6Q8TEU7 1601 aa15.65■□□□□ 0.1
SNF8-214ENST00000515174 HECW1Q76N89 1606 aa15.64■□□□□ 0.09
SNF8-214ENST00000515174 CARMIL2Q6F5E8 1435 aa15.62■□□□□ 0.09
SNF8-214ENST00000515174 CASKIN1Q8WXD9 1431 aa15.62■□□□□ 0.09
SNF8-214ENST00000515174 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
SNF8-214ENST00000515174 ABCC10Q5T3U5 1492 aa15.62■□□□□ 0.09
SNF8-214ENST00000515174 FYCO1Q9BQS8 1478 aa15.61■□□□□ 0.09
SNF8-214ENST00000515174 ABCA8O94911 1581 aa15.59■□□□□ 0.09
SNF8-214ENST00000515174 KDM4FA0A1W2PPD8 638 aa15.57■□□□□ 0.08
SNF8-214ENST00000515174 KANK4Q5T7N3 995 aaPredicted RBP15.57■□□□□ 0.08
SNF8-214ENST00000515174 TIAM1Q13009 1591 aa15.57■□□□□ 0.08
SNF8-214ENST00000515174 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
SNF8-214ENST00000515174 KDM6BO15054 1643 aa15.55■□□□□ 0.08
SNF8-214ENST00000515174 MAPKBP1O60336 1514 aa15.54■□□□□ 0.08
SNF8-214ENST00000515174 PLB1Q6P1J6 1458 aa15.54■□□□□ 0.08
SNF8-214ENST00000515174 DIP2BQ9P265 1576 aa15.53■□□□□ 0.08
SNF8-214ENST00000515174 TTBK1Q5TCY1 1321 aaPredicted RBP15.53■□□□□ 0.08
SNF8-214ENST00000515174 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.08
SNF8-214ENST00000515174 RRBP1Q9P2E9 1410 aaKnown RBP15.52■□□□□ 0.08
SNF8-214ENST00000515174 ILDR1Q86SU0 546 aaPredicted RBP15.52■□□□□ 0.08
SNF8-214ENST00000515174 ADCY10Q96PN6 1610 aa15.52■□□□□ 0.08
SNF8-214ENST00000515174 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.07
SNF8-214ENST00000515174 NUP153P49790 1475 aaKnown RBP15.52■□□□□ 0.07
SNF8-214ENST00000515174 ABCC2Q92887 1545 aa15.5■□□□□ 0.07
SNF8-214ENST00000515174 TSPOAP1O95153 1857 aa15.5■□□□□ 0.07
SNF8-214ENST00000515174 ZCCHC11Q5TAX3 1644 aaKnown RBP15.49■□□□□ 0.07
SNF8-214ENST00000515174 CCDC18Q5T9S5 1454 aa15.48■□□□□ 0.07
SNF8-214ENST00000515174 PTPRGP23470 1445 aa15.47■□□□□ 0.07
SNF8-214ENST00000515174 EPRSP07814 1512 aaKnown RBP15.47■□□□□ 0.07
SNF8-214ENST00000515174 MAGI3Q5TCQ9 1506 aa15.46■□□□□ 0.07
SNF8-214ENST00000515174 EHBP1L1Q8N3D4 1523 aa15.44■□□□□ 0.06
SNF8-214ENST00000515174 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
SNF8-214ENST00000515174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNF8-214ENST00000515174 CCNB3Q8WWL7 1395 aa15.42■□□□□ 0.06
SNF8-214ENST00000515174 UHRF1BP1LA0JNW5 1464 aa15.41■□□□□ 0.06
SNF8-214ENST00000515174 SUPT6HQ7KZ85 1726 aaKnown RBP15.4■□□□□ 0.06
SNF8-214ENST00000515174 KIF14Q15058 1648 aa15.39■□□□□ 0.05
SNF8-214ENST00000515174 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
SNF8-214ENST00000515174 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
SNF8-214ENST00000515174 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
SNF8-214ENST00000515174 KDM5BQ9UGL1 1544 aa15.36■□□□□ 0.05
SNF8-214ENST00000515174 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
SNF8-214ENST00000515174 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
SNF8-214ENST00000515174 ASXL2Q76L83 1435 aa15.35■□□□□ 0.05
SNF8-214ENST00000515174 ATP10BO94823 1461 aa15.35■□□□□ 0.05
SNF8-214ENST00000515174 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
SNF8-214ENST00000515174 ITSN2Q9NZM3 1697 aa15.32■□□□□ 0.04
SNF8-214ENST00000515174 CDC42BPAQ5VT25 1732 aa15.31■□□□□ 0.04
SNF8-214ENST00000515174 CCER1Q8TC90 406 aaPredicted RBP15.31■□□□□ 0.04
SNF8-214ENST00000515174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
SNF8-214ENST00000515174 TTC37Q6PGP7 1564 aa15.3■□□□□ 0.04
SNF8-214ENST00000515174 TROQ12816 1431 aaPredicted RBP15.29■□□□□ 0.04
SNF8-214ENST00000515174 CDK11AQ9UQ88 783 aaPredicted RBP15.29■□□□□ 0.04
SNF8-214ENST00000515174 GLI2P10070 1586 aa15.28■□□□□ 0.04
SNF8-214ENST00000515174 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
SNF8-214ENST00000515174 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
SNF8-214ENST00000515174 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms