RNA–Protein interactions for RNA: ENST00000515006.5

COPB2-213, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-213ENST00000515006 SENP3Q9H4L4 574 aaPredicted RBP9.34□□□□□ -0.91
COPB2-213ENST00000515006 SNAPC4Q5SXM2 1469 aa9.34□□□□□ -0.91
COPB2-213ENST00000515006 EIF4G3O43432 1585 aaKnown RBP9.33□□□□□ -0.92
COPB2-213ENST00000515006 KCNA4P22459 653 aa9.33□□□□□ -0.92
COPB2-213ENST00000515006 RANGAP1P46060 587 aaPredicted RBP9.31□□□□□ -0.92
COPB2-213ENST00000515006 GRIN2AQ12879 1464 aa9.31□□□□□ -0.92
COPB2-213ENST00000515006 ADAMTS12P58397 1594 aa9.31□□□□□ -0.92
COPB2-213ENST00000515006 KIAA0586Q9BVV6 1533 aa9.31□□□□□ -0.92
COPB2-213ENST00000515006 PBRM1Q86U86 1689 aa9.29□□□□□ -0.92
COPB2-213ENST00000515006 JPH4Q96JJ6 628 aa9.27□□□□□ -0.93
COPB2-213ENST00000515006 VPS8Q8N3P4 1428 aa9.27□□□□□ -0.93
COPB2-213ENST00000515006 EFCAB5A4FU69 1503 aa9.26□□□□□ -0.93
COPB2-213ENST00000515006 NUP160Q12769 1436 aa9.26□□□□□ -0.93
COPB2-213ENST00000515006 FMN1Q68DA7 1419 aa9.25□□□□□ -0.93
COPB2-213ENST00000515006 CARMIL2Q6F5E8 1435 aa9.25□□□□□ -0.93
COPB2-213ENST00000515006 ARHGAP35Q9NRY4 1499 aa9.25□□□□□ -0.93
COPB2-213ENST00000515006 P3H3Q8IVL6 736 aa9.23□□□□□ -0.93
COPB2-213ENST00000515006 OSCARQ8IYS5 282 aa9.23□□□□□ -0.93
COPB2-213ENST00000515006 IQGAP2Q13576 1575 aa9.23□□□□□ -0.93
COPB2-213ENST00000515006 UGGT2Q9NYU1 1516 aa9.21□□□□□ -0.93
COPB2-213ENST00000515006 TRIM26Q12899 539 aaPredicted RBP9.2□□□□□ -0.94
COPB2-213ENST00000515006 ARAP1Q96P48 1450 aa9.2□□□□□ -0.94
COPB2-213ENST00000515006 ATP1B4Q9UN42 357 aaPredicted RBP9.19□□□□□ -0.94
COPB2-213ENST00000515006 CTTNBP2Q8WZ74 1663 aa9.19□□□□□ -0.94
COPB2-213ENST00000515006 FHOD3Q2V2M9 1422 aa9.17□□□□□ -0.94
COPB2-213ENST00000515006 CASKIN1Q8WXD9 1431 aa9.17□□□□□ -0.94
COPB2-213ENST00000515006 CDK11AQ9UQ88 783 aaPredicted RBP9.17□□□□□ -0.94
COPB2-213ENST00000515006 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
COPB2-213ENST00000515006 SAMD9Q5K651 1589 aa9.16□□□□□ -0.94
COPB2-213ENST00000515006 MAP3K1Q13233 1512 aa9.15□□□□□ -0.94
COPB2-213ENST00000515006 PRG4Q92954 1404 aaPredicted RBP9.15□□□□□ -0.94
COPB2-213ENST00000515006 FYCO1Q9BQS8 1478 aa9.14□□□□□ -0.95
COPB2-213ENST00000515006 PTPRGP23470 1445 aa9.14□□□□□ -0.95
COPB2-213ENST00000515006 SLC4A1APQ9BWU0 796 aaKnown RBP9.13□□□□□ -0.95
COPB2-213ENST00000515006 DISP1Q96F81 1524 aa9.13□□□□□ -0.95
COPB2-213ENST00000515006 CCDC18Q5T9S5 1454 aa9.1□□□□□ -0.95
COPB2-213ENST00000515006 KIAA0556O60303 1618 aa9.1□□□□□ -0.95
COPB2-213ENST00000515006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.1□□□□□ -0.95
COPB2-213ENST00000515006 HNRNPUL2Q1KMD3 747 aaKnown RBP9.1□□□□□ -0.95
COPB2-213ENST00000515006 TTBK1Q5TCY1 1321 aaPredicted RBP9.09□□□□□ -0.95
COPB2-213ENST00000515006 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
COPB2-213ENST00000515006 CLASP1Q7Z460 1538 aa9.09□□□□□ -0.95
COPB2-213ENST00000515006 CHD1O14646 1710 aa9.08□□□□□ -0.96
COPB2-213ENST00000515006 PLEKHD1A6NEE1 506 aa9.08□□□□□ -0.96
COPB2-213ENST00000515006 PCGF6Q9BYE7 350 aa9.08□□□□□ -0.96
COPB2-213ENST00000515006 MTUS2Q5JR59 1369 aa9.08□□□□□ -0.96
COPB2-213ENST00000515006 KANK4Q5T7N3 995 aaPredicted RBP9.07□□□□□ -0.96
COPB2-213ENST00000515006 LRRC9Q6ZRR7 1453 aa9.06□□□□□ -0.96
COPB2-213ENST00000515006 UACAQ9BZF9 1416 aa9.05□□□□□ -0.96
COPB2-213ENST00000515006 SHROOM2Q13796 1616 aa9.05□□□□□ -0.96
COPB2-213ENST00000515006 HECW1Q76N89 1606 aa9.05□□□□□ -0.96
COPB2-213ENST00000515006 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
COPB2-213ENST00000515006 EPRSP07814 1512 aaKnown RBP9.05□□□□□ -0.96
COPB2-213ENST00000515006 TIAM1Q13009 1591 aa9.04□□□□□ -0.96
COPB2-213ENST00000515006 PCF11O94913 1555 aaKnown RBP9.03□□□□□ -0.96
COPB2-213ENST00000515006 PLB1Q6P1J6 1458 aa9.02□□□□□ -0.96
COPB2-213ENST00000515006 AMER1Q5JTC6 1135 aaPredicted RBP9.02□□□□□ -0.97
COPB2-213ENST00000515006 UHRF1BP1LA0JNW5 1464 aa9.02□□□□□ -0.97
COPB2-213ENST00000515006 NUP153P49790 1475 aaKnown RBP9.02□□□□□ -0.97
COPB2-213ENST00000515006 RAPGEF6Q8TEU7 1601 aa9.02□□□□□ -0.97
COPB2-213ENST00000515006 ADRA2BP18089 450 aa9.01□□□□□ -0.97
COPB2-213ENST00000515006 ABCA8O94911 1581 aa8.99□□□□□ -0.97
COPB2-213ENST00000515006 ATP10BO94823 1461 aa8.99□□□□□ -0.97
COPB2-213ENST00000515006 EHBP1L1Q8N3D4 1523 aa8.99□□□□□ -0.97
COPB2-213ENST00000515006 CCNB3Q8WWL7 1395 aa8.99□□□□□ -0.97
COPB2-213ENST00000515006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.99□□□□□ -0.97
COPB2-213ENST00000515006 TROQ12816 1431 aaPredicted RBP8.98□□□□□ -0.97
COPB2-213ENST00000515006 ARID3CA6NKF2 412 aa8.98□□□□□ -0.97
COPB2-213ENST00000515006 ABCC2Q92887 1545 aa8.98□□□□□ -0.97
COPB2-213ENST00000515006 RRBP1Q9P2E9 1410 aaKnown RBP8.97□□□□□ -0.97
COPB2-213ENST00000515006 CFAP43Q8NDM7 1665 aa8.96□□□□□ -0.98
COPB2-213ENST00000515006 MIA2Q96PC5 1412 aa8.96□□□□□ -0.98
COPB2-213ENST00000515006 NCOA2Q15596 1464 aa8.96□□□□□ -0.98
COPB2-213ENST00000515006 FAM50AQ14320 339 aaKnown RBP8.95□□□□□ -0.98
COPB2-213ENST00000515006 ACIN1Q9UKV3 1341 aaKnown RBP8.95□□□□□ -0.98
COPB2-213ENST00000515006 MYOM3Q5VTT5 1437 aa8.95□□□□□ -0.98
COPB2-213ENST00000515006 KDM5BQ9UGL1 1544 aa8.95□□□□□ -0.98
COPB2-213ENST00000515006 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
COPB2-213ENST00000515006 CFDP1Q9UEE9 299 aaPredicted RBP8.94□□□□□ -0.98
COPB2-213ENST00000515006 PHLDB1Q86UU1 1377 aa8.94□□□□□ -0.98
COPB2-213ENST00000515006 CDK13Q14004 1512 aaKnown RBP8.94□□□□□ -0.98
COPB2-213ENST00000515006 ERCC6L2Q5T890 1561 aa8.94□□□□□ -0.98
COPB2-213ENST00000515006 SUPT6HQ7KZ85 1726 aaKnown RBP8.92□□□□□ -0.98
COPB2-213ENST00000515006 FGD6Q6ZV73 1430 aa8.92□□□□□ -0.98
COPB2-213ENST00000515006 CYB5RLQ6IPT4 315 aa8.92□□□□□ -0.98
COPB2-213ENST00000515006 RTN4Q9NQC3 1192 aaKnown RBP8.92□□□□□ -0.98
COPB2-213ENST00000515006 ARHGEF11O15085 1522 aa8.91□□□□□ -0.98
COPB2-213ENST00000515006 HRCP23327 699 aa8.91□□□□□ -0.98
COPB2-213ENST00000515006 KCNH8Q96L42 1107 aa8.91□□□□□ -0.98
COPB2-213ENST00000515006 EFCAB2Q5VUJ9 269 aa8.89□□□□□ -0.99
COPB2-213ENST00000515006 MAGI3Q5TCQ9 1506 aa8.89□□□□□ -0.99
COPB2-213ENST00000515006 TSPY4P0CV99 314 aa8.88□□□□□ -0.99
COPB2-213ENST00000515006 TSPY10P0CW01 314 aa8.88□□□□□ -0.99
COPB2-213ENST00000515006 ZEB1P37275 1124 aaPredicted RBP8.88□□□□□ -0.99
COPB2-213ENST00000515006 ITGAEP38570 1179 aa8.88□□□□□ -0.99
COPB2-213ENST00000515006 KIF14Q15058 1648 aa8.87□□□□□ -0.99
COPB2-213ENST00000515006 GPATCH8Q9UKJ3 1502 aaKnown RBP8.87□□□□□ -0.99
COPB2-213ENST00000515006 TCOF1Q13428 1488 aaKnown RBP8.86□□□□□ -0.99
COPB2-213ENST00000515006 WDR7Q9Y4E6 1490 aa8.86□□□□□ -0.99
COPB2-213ENST00000515006 ZNF777Q9ULD5 760 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms