RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 ARAP1Q96P48 1450 aa19.28■□□□□ 0.68
RACK1-229ENST00000513027 APLP2Q06481 763 aa19.28■□□□□ 0.68
RACK1-229ENST00000513027 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
RACK1-229ENST00000513027 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
RACK1-229ENST00000513027 SYNJ2O15056 1496 aa19.2■□□□□ 0.66
RACK1-229ENST00000513027 MAP3K1Q13233 1512 aa19.2■□□□□ 0.66
RACK1-229ENST00000513027 RANGAP1P46060 587 aaPredicted RBP19.18■□□□□ 0.66
RACK1-229ENST00000513027 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
RACK1-229ENST00000513027 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
RACK1-229ENST00000513027 KIAA0586Q9BVV6 1533 aa19.16■□□□□ 0.66
RACK1-229ENST00000513027 IQGAP2Q13576 1575 aa19.16■□□□□ 0.66
RACK1-229ENST00000513027 SAMD9Q5K651 1589 aa19.16■□□□□ 0.66
RACK1-229ENST00000513027 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
RACK1-229ENST00000513027 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
RACK1-229ENST00000513027 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
RACK1-229ENST00000513027 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.64
RACK1-229ENST00000513027 NUP160Q12769 1436 aa19.06■□□□□ 0.64
RACK1-229ENST00000513027 FHOD3Q2V2M9 1422 aa19.03■□□□□ 0.64
RACK1-229ENST00000513027 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
RACK1-229ENST00000513027 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
RACK1-229ENST00000513027 PCF11O94913 1555 aaKnown RBP18.98■□□□□ 0.63
RACK1-229ENST00000513027 CEP170Q5SW79 1584 aa18.98■□□□□ 0.63
RACK1-229ENST00000513027 CFAP43Q8NDM7 1665 aa18.97■□□□□ 0.63
RACK1-229ENST00000513027 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
RACK1-229ENST00000513027 CARMIL2Q6F5E8 1435 aa18.96■□□□□ 0.63
RACK1-229ENST00000513027 FBLN2P98095 1184 aa18.94■□□□□ 0.62
RACK1-229ENST00000513027 KIAA0556O60303 1618 aa18.93■□□□□ 0.62
RACK1-229ENST00000513027 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
RACK1-229ENST00000513027 LRRC9Q6ZRR7 1453 aa18.92■□□□□ 0.62
RACK1-229ENST00000513027 DISP1Q96F81 1524 aa18.92■□□□□ 0.62
RACK1-229ENST00000513027 HECW1Q76N89 1606 aa18.89■□□□□ 0.62
RACK1-229ENST00000513027 KANK4Q5T7N3 995 aaPredicted RBP18.89■□□□□ 0.61
RACK1-229ENST00000513027 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
RACK1-229ENST00000513027 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
RACK1-229ENST00000513027 CHD1O14646 1710 aa18.85■□□□□ 0.61
RACK1-229ENST00000513027 HRCP23327 699 aa18.83■□□□□ 0.6
RACK1-229ENST00000513027 ATP1B4Q9UN42 357 aaPredicted RBP18.82■□□□□ 0.6
RACK1-229ENST00000513027 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
RACK1-229ENST00000513027 ZEB1P37275 1124 aaPredicted RBP18.81■□□□□ 0.6
RACK1-229ENST00000513027 EHBP1L1Q8N3D4 1523 aa18.79■□□□□ 0.6
RACK1-229ENST00000513027 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
RACK1-229ENST00000513027 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
RACK1-229ENST00000513027 EPRSP07814 1512 aaKnown RBP18.78■□□□□ 0.6
RACK1-229ENST00000513027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
RACK1-229ENST00000513027 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
RACK1-229ENST00000513027 CCNB3Q8WWL7 1395 aa18.77■□□□□ 0.6
RACK1-229ENST00000513027 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
RACK1-229ENST00000513027 LRRIQ1Q96JM4 1722 aa18.74■□□□□ 0.59
RACK1-229ENST00000513027 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
RACK1-229ENST00000513027 SUPT6HQ7KZ85 1726 aaKnown RBP18.73■□□□□ 0.59
RACK1-229ENST00000513027 CLASP1Q7Z460 1538 aa18.71■□□□□ 0.59
RACK1-229ENST00000513027 NUP153P49790 1475 aaKnown RBP18.7■□□□□ 0.58
RACK1-229ENST00000513027 ABCA8O94911 1581 aa18.68■□□□□ 0.58
RACK1-229ENST00000513027 PTPRGP23470 1445 aa18.67■□□□□ 0.58
RACK1-229ENST00000513027 ARHGEF11O15085 1522 aa18.67■□□□□ 0.58
RACK1-229ENST00000513027 PHLDB1Q86UU1 1377 aa18.67■□□□□ 0.58
RACK1-229ENST00000513027 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
RACK1-229ENST00000513027 MYOM3Q5VTT5 1437 aa18.64■□□□□ 0.57
RACK1-229ENST00000513027 FGD6Q6ZV73 1430 aa18.63■□□□□ 0.57
RACK1-229ENST00000513027 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
RACK1-229ENST00000513027 PLB1Q6P1J6 1458 aa18.62■□□□□ 0.57
RACK1-229ENST00000513027 CDK13Q14004 1512 aaKnown RBP18.61■□□□□ 0.57
RACK1-229ENST00000513027 HNRNPUL2Q1KMD3 747 aaKnown RBP18.6■□□□□ 0.57
RACK1-229ENST00000513027 MAGI3Q5TCQ9 1506 aa18.59■□□□□ 0.57
RACK1-229ENST00000513027 TROQ12816 1431 aaPredicted RBP18.59■□□□□ 0.57
RACK1-229ENST00000513027 UACAQ9BZF9 1416 aa18.58■□□□□ 0.57
RACK1-229ENST00000513027 CCER1Q8TC90 406 aaPredicted RBP18.56■□□□□ 0.56
RACK1-229ENST00000513027 ADCY10Q96PN6 1610 aa18.56■□□□□ 0.56
RACK1-229ENST00000513027 UHRF1BP1LA0JNW5 1464 aa18.54■□□□□ 0.56
RACK1-229ENST00000513027 TCOF1Q13428 1488 aaKnown RBP18.54■□□□□ 0.56
RACK1-229ENST00000513027 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
RACK1-229ENST00000513027 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
RACK1-229ENST00000513027 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
RACK1-229ENST00000513027 ATP10BO94823 1461 aa18.53■□□□□ 0.56
RACK1-229ENST00000513027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
RACK1-229ENST00000513027 ABCC2Q92887 1545 aa18.52■□□□□ 0.56
RACK1-229ENST00000513027 FAM50AQ14320 339 aaKnown RBP18.51■□□□□ 0.55
RACK1-229ENST00000513027 PTPN23Q9H3S7 1636 aa18.5■□□□□ 0.55
RACK1-229ENST00000513027 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
RACK1-229ENST00000513027 ITSN2Q9NZM3 1697 aa18.49■□□□□ 0.55
RACK1-229ENST00000513027 KIF14Q15058 1648 aa18.46■□□□□ 0.55
RACK1-229ENST00000513027 SETD5Q9C0A6 1442 aa18.46■□□□□ 0.55
RACK1-229ENST00000513027 ERCC6L2Q5T890 1561 aa18.44■□□□□ 0.54
RACK1-229ENST00000513027 AKNAQ7Z591 1439 aa18.43■□□□□ 0.54
RACK1-229ENST00000513027 KDM5BQ9UGL1 1544 aa18.42■□□□□ 0.54
RACK1-229ENST00000513027 ARID3CA6NKF2 412 aa18.41■□□□□ 0.54
RACK1-229ENST00000513027 ITGAEP38570 1179 aa18.39■□□□□ 0.53
RACK1-229ENST00000513027 HFM1A2PYH4 1435 aa18.39■□□□□ 0.53
RACK1-229ENST00000513027 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.53
RACK1-229ENST00000513027 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.53
RACK1-229ENST00000513027 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
RACK1-229ENST00000513027 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
RACK1-229ENST00000513027 ROCK1Q13464 1354 aa18.35■□□□□ 0.53
RACK1-229ENST00000513027 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
RACK1-229ENST00000513027 DHX57Q6P158 1386 aaKnown RBP18.33■□□□□ 0.53
RACK1-229ENST00000513027 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
RACK1-229ENST00000513027 RSPH4AQ5TD94 716 aa18.31■□□□□ 0.52
RACK1-229ENST00000513027 CDC42BPAQ5VT25 1732 aa18.31■□□□□ 0.52
RACK1-229ENST00000513027 DAPK1P53355 1430 aa18.3■□□□□ 0.52
RACK1-229ENST00000513027 CAMSAP2Q08AD1 1489 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms