RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 CUL7Q14999 1698 aa20.99■□□□□ 0.95
CDK7-208ENST00000512687 RUSC2Q8N2Y8 1516 aa20.99■□□□□ 0.95
CDK7-208ENST00000512687 KIF27Q86VH2 1401 aa20.94■□□□□ 0.94
CDK7-208ENST00000512687 IGF1RP08069 1367 aa20.9■□□□□ 0.94
CDK7-208ENST00000512687 PRG4Q92954 1404 aaPredicted RBP20.83■□□□□ 0.93
CDK7-208ENST00000512687 KIAA0586Q9BVV6 1533 aa20.78■□□□□ 0.92
CDK7-208ENST00000512687 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
CDK7-208ENST00000512687 JPH4Q96JJ6 628 aa20.77■□□□□ 0.92
CDK7-208ENST00000512687 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
CDK7-208ENST00000512687 KIF13AQ9H1H9 1805 aa20.69■□□□□ 0.9
CDK7-208ENST00000512687 IQGAP2Q13576 1575 aa20.69■□□□□ 0.9
CDK7-208ENST00000512687 ADCY10Q96PN6 1610 aa20.68■□□□□ 0.9
CDK7-208ENST00000512687 CTTNBP2Q8WZ74 1663 aa20.65■□□□□ 0.9
CDK7-208ENST00000512687 FOXD1Q16676 465 aa20.65■□□□□ 0.9
CDK7-208ENST00000512687 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.89
CDK7-208ENST00000512687 DISP1Q96F81 1524 aa20.56■□□□□ 0.88
CDK7-208ENST00000512687 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
CDK7-208ENST00000512687 MAPKBP1O60336 1514 aa20.54■□□□□ 0.88
CDK7-208ENST00000512687 KIAA0556O60303 1618 aa20.53■□□□□ 0.88
CDK7-208ENST00000512687 CARMIL2Q6F5E8 1435 aa20.52■□□□□ 0.87
CDK7-208ENST00000512687 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
CDK7-208ENST00000512687 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
CDK7-208ENST00000512687 TNIKQ9UKE5 1360 aa20.5■□□□□ 0.87
CDK7-208ENST00000512687 PTPRGP23470 1445 aa20.49■□□□□ 0.87
CDK7-208ENST00000512687 ABCC10Q5T3U5 1492 aa20.45■□□□□ 0.86
CDK7-208ENST00000512687 TTBK1Q5TCY1 1321 aaPredicted RBP20.45■□□□□ 0.86
CDK7-208ENST00000512687 TSPOAP1O95153 1857 aa20.43■□□□□ 0.86
CDK7-208ENST00000512687 ABCC2Q92887 1545 aa20.42■□□□□ 0.86
CDK7-208ENST00000512687 UHRF1BP1LA0JNW5 1464 aa20.41■□□□□ 0.86
CDK7-208ENST00000512687 NPM1P06748 294 aaKnown RBP eCLIP20.4■□□□□ 0.86
CDK7-208ENST00000512687 ZCCHC11Q5TAX3 1644 aaKnown RBP20.38■□□□□ 0.85
CDK7-208ENST00000512687 UACAQ9BZF9 1416 aa20.37■□□□□ 0.85
CDK7-208ENST00000512687 FAM69CQ0P6D2 419 aa20.34■□□□□ 0.85
CDK7-208ENST00000512687 GOLGA3Q08378 1498 aa20.33■□□□□ 0.85
CDK7-208ENST00000512687 KDM5BQ9UGL1 1544 aa20.32■□□□□ 0.84
CDK7-208ENST00000512687 PPRC1Q5VV67 1664 aaKnown RBP20.32■□□□□ 0.84
CDK7-208ENST00000512687 EEA1Q15075 1411 aa20.32■□□□□ 0.84
CDK7-208ENST00000512687 ABCA8O94911 1581 aa20.31■□□□□ 0.84
CDK7-208ENST00000512687 ASXL2Q76L83 1435 aa20.31■□□□□ 0.84
CDK7-208ENST00000512687 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
CDK7-208ENST00000512687 PLB1Q6P1J6 1458 aa20.3■□□□□ 0.84
CDK7-208ENST00000512687 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
CDK7-208ENST00000512687 GLI2P10070 1586 aa20.28■□□□□ 0.84
CDK7-208ENST00000512687 KIF21BO75037 1637 aa20.27■□□□□ 0.84
CDK7-208ENST00000512687 MAP3K4Q9Y6R4 1608 aa20.24■□□□□ 0.83
CDK7-208ENST00000512687 KDM6BO15054 1643 aa20.24■□□□□ 0.83
CDK7-208ENST00000512687 EPRSP07814 1512 aaKnown RBP20.22■□□□□ 0.83
CDK7-208ENST00000512687 FAM9AQ8IZU1 332 aaPredicted RBP20.21■□□□□ 0.83
CDK7-208ENST00000512687 WDR7Q9Y4E6 1490 aa20.17■□□□□ 0.82
CDK7-208ENST00000512687 RAPGEF6Q8TEU7 1601 aa20.16■□□□□ 0.82
CDK7-208ENST00000512687 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
CDK7-208ENST00000512687 CFAP43Q8NDM7 1665 aa20.13■□□□□ 0.81
CDK7-208ENST00000512687 ADRA2BP18089 450 aa20.12■□□□□ 0.81
CDK7-208ENST00000512687 FHOD3Q2V2M9 1422 aa20.09■□□□□ 0.81
CDK7-208ENST00000512687 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
CDK7-208ENST00000512687 ATP10BO94823 1461 aa20.07■□□□□ 0.8
CDK7-208ENST00000512687 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
CDK7-208ENST00000512687 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
CDK7-208ENST00000512687 ARID3CA6NKF2 412 aa20.03■□□□□ 0.8
CDK7-208ENST00000512687 NUP153P49790 1475 aaKnown RBP20.03■□□□□ 0.8
CDK7-208ENST00000512687 TEX14Q8IWB6 1497 aa20.03■□□□□ 0.8
CDK7-208ENST00000512687 COL17A1Q9UMD9 1497 aaPredicted RBP20.03■□□□□ 0.8
CDK7-208ENST00000512687 EHMT2Q96KQ7 1210 aa20.01■□□□□ 0.79
CDK7-208ENST00000512687 ABCA9Q8IUA7 1624 aa20■□□□□ 0.79
CDK7-208ENST00000512687 MAGI3Q5TCQ9 1506 aa19.99■□□□□ 0.79
CDK7-208ENST00000512687 CD109Q6YHK3 1445 aa19.97■□□□□ 0.79
CDK7-208ENST00000512687 KCNH8Q96L42 1107 aa19.97■□□□□ 0.79
CDK7-208ENST00000512687 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
CDK7-208ENST00000512687 LRRIQ1Q96JM4 1722 aa19.93■□□□□ 0.78
CDK7-208ENST00000512687 UBTFP17480 764 aaKnown RBP19.92■□□□□ 0.78
CDK7-208ENST00000512687 CDK13Q14004 1512 aaKnown RBP19.9■□□□□ 0.78
CDK7-208ENST00000512687 HECW1Q76N89 1606 aa19.87■□□□□ 0.77
CDK7-208ENST00000512687 TTC37Q6PGP7 1564 aa19.85■□□□□ 0.77
CDK7-208ENST00000512687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
CDK7-208ENST00000512687 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
CDK7-208ENST00000512687 KDM4FA0A1W2PPD8 638 aa19.83■□□□□ 0.77
CDK7-208ENST00000512687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.82■□□□□ 0.76
CDK7-208ENST00000512687 ARAP3Q8WWN8 1544 aa19.82■□□□□ 0.76
CDK7-208ENST00000512687 FMN1Q68DA7 1419 aa19.81■□□□□ 0.76
CDK7-208ENST00000512687 FRMPD1Q5SYB0 1578 aa19.81■□□□□ 0.76
CDK7-208ENST00000512687 PCF11O94913 1555 aaKnown RBP19.79■□□□□ 0.76
CDK7-208ENST00000512687 ADGRL1O94910 1474 aa19.79■□□□□ 0.76
CDK7-208ENST00000512687 RICTORQ6R327 1708 aa19.77■□□□□ 0.76
CDK7-208ENST00000512687 NEO1Q92859 1461 aa19.77■□□□□ 0.76
CDK7-208ENST00000512687 CFAP74Q9C0B2 1584 aa19.77■□□□□ 0.76
CDK7-208ENST00000512687 KIF14Q15058 1648 aa19.76■□□□□ 0.75
CDK7-208ENST00000512687 PLEKHD1A6NEE1 506 aa19.75■□□□□ 0.75
CDK7-208ENST00000512687 MYO5CQ9NQX4 1742 aa19.75■□□□□ 0.75
CDK7-208ENST00000512687 PHLDB1Q86UU1 1377 aa19.7■□□□□ 0.74
CDK7-208ENST00000512687 FANCAO15360 1455 aa19.69■□□□□ 0.74
CDK7-208ENST00000512687 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
CDK7-208ENST00000512687 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
CDK7-208ENST00000512687 AKNAQ7Z591 1439 aa19.66■□□□□ 0.74
CDK7-208ENST00000512687 CASKIN1Q8WXD9 1431 aa19.66■□□□□ 0.74
CDK7-208ENST00000512687 PIAS4Q8N2W9 510 aaPredicted RBP19.65■□□□□ 0.74
CDK7-208ENST00000512687 CLIP1P30622 1438 aa19.65■□□□□ 0.74
CDK7-208ENST00000512687 ARHGEF40Q8TER5 1519 aa19.65■□□□□ 0.74
CDK7-208ENST00000512687 CDC42BPBQ9Y5S2 1711 aa19.65■□□□□ 0.74
CDK7-208ENST00000512687 TROQ12816 1431 aaPredicted RBP19.64■□□□□ 0.73
CDK7-208ENST00000512687 FYCO1Q9BQS8 1478 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms