RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 CTTNBP2Q8WZ74 1663 aa38.02■■■■□ 3.68
SPOCK3-221ENST00000512648 SNAPC4Q5SXM2 1469 aa37.99■■■■□ 3.67
SPOCK3-221ENST00000512648 EFCAB5A4FU69 1503 aa37.96■■■■□ 3.67
SPOCK3-221ENST00000512648 PCGF6Q9BYE7 350 aa37.91■■■■□ 3.66
SPOCK3-221ENST00000512648 SYNJ2O15056 1496 aa37.87■■■■□ 3.65
SPOCK3-221ENST00000512648 GRIN2AQ12879 1464 aa37.85■■■■□ 3.65
SPOCK3-221ENST00000512648 APLP2Q06481 763 aa37.79■■■■□ 3.64
SPOCK3-221ENST00000512648 KIAA0586Q9BVV6 1533 aa37.77■■■■□ 3.64
SPOCK3-221ENST00000512648 SAMD9Q5K651 1589 aa37.75■■■■□ 3.63
SPOCK3-221ENST00000512648 CHMP7Q8WUX9 453 aaPredicted RBP37.74■■■■□ 3.63
SPOCK3-221ENST00000512648 IQGAP2Q13576 1575 aa37.73■■■■□ 3.63
SPOCK3-221ENST00000512648 PPARGC1BQ86YN6 1023 aaKnown RBP37.71■■■■□ 3.63
SPOCK3-221ENST00000512648 MAP3K1Q13233 1512 aa37.66■■■■□ 3.62
SPOCK3-221ENST00000512648 UGGT2Q9NYU1 1516 aa37.66■■■■□ 3.62
SPOCK3-221ENST00000512648 NUP160Q12769 1436 aa37.64■■■■□ 3.62
SPOCK3-221ENST00000512648 FMN1Q68DA7 1419 aa37.64■■■■□ 3.62
SPOCK3-221ENST00000512648 FHOD3Q2V2M9 1422 aa37.63■■■■□ 3.62
SPOCK3-221ENST00000512648 P3H3Q8IVL6 736 aa37.58■■■■□ 3.61
SPOCK3-221ENST00000512648 CASKIN1Q8WXD9 1431 aa37.56■■■■□ 3.6
SPOCK3-221ENST00000512648 CEP170Q5SW79 1584 aa37.53■■■■□ 3.6
SPOCK3-221ENST00000512648 FYCO1Q9BQS8 1478 aa37.52■■■■□ 3.6
SPOCK3-221ENST00000512648 FBLN2P98095 1184 aa37.49■■■■□ 3.59
SPOCK3-221ENST00000512648 PCF11O94913 1555 aaKnown RBP37.44■■■■□ 3.58
SPOCK3-221ENST00000512648 TIAM1Q13009 1591 aa37.42■■■■□ 3.58
SPOCK3-221ENST00000512648 DISP1Q96F81 1524 aa37.4■■■■□ 3.58
SPOCK3-221ENST00000512648 KANK4Q5T7N3 995 aaPredicted RBP37.39■■■■□ 3.58
SPOCK3-221ENST00000512648 KIAA0556O60303 1618 aa37.34■■■■□ 3.57
SPOCK3-221ENST00000512648 JPH4Q96JJ6 628 aa37.34■■■■□ 3.57
SPOCK3-221ENST00000512648 TTBK1Q5TCY1 1321 aaPredicted RBP37.32■■■■□ 3.57
SPOCK3-221ENST00000512648 LRRC9Q6ZRR7 1453 aa37.29■■■■□ 3.56
SPOCK3-221ENST00000512648 CFAP43Q8NDM7 1665 aa37.28■■■■□ 3.56
SPOCK3-221ENST00000512648 CARMIL2Q6F5E8 1435 aa37.27■■■■□ 3.56
SPOCK3-221ENST00000512648 CHD1O14646 1710 aa37.23■■■■□ 3.55
SPOCK3-221ENST00000512648 ATP1B4Q9UN42 357 aaPredicted RBP37.17■■■■□ 3.54
SPOCK3-221ENST00000512648 CCDC18Q5T9S5 1454 aa37.16■■■■□ 3.54
SPOCK3-221ENST00000512648 HECW1Q76N89 1606 aa37.13■■■■□ 3.53
SPOCK3-221ENST00000512648 RRBP1Q9P2E9 1410 aaKnown RBP37.12■■■■□ 3.53
SPOCK3-221ENST00000512648 SHROOM2Q13796 1616 aa37.06■■■■□ 3.52
SPOCK3-221ENST00000512648 EPRSP07814 1512 aaKnown RBP37.03■■■■□ 3.52
SPOCK3-221ENST00000512648 PRG4Q92954 1404 aaPredicted RBP37.02■■■■□ 3.52
SPOCK3-221ENST00000512648 LRRIQ1Q96JM4 1722 aa37.01■■■■□ 3.51
SPOCK3-221ENST00000512648 HRCP23327 699 aa36.99■■■■□ 3.51
SPOCK3-221ENST00000512648 CLASP1Q7Z460 1538 aa36.98■■■■□ 3.51
SPOCK3-221ENST00000512648 RAPGEF6Q8TEU7 1601 aa36.98■■■■□ 3.51
SPOCK3-221ENST00000512648 MTUS2Q5JR59 1369 aa36.98■■■■□ 3.51
SPOCK3-221ENST00000512648 CCNB3Q8WWL7 1395 aa36.94■■■■□ 3.5
SPOCK3-221ENST00000512648 NUP153P49790 1475 aaKnown RBP36.93■■■■□ 3.5
SPOCK3-221ENST00000512648 EHBP1L1Q8N3D4 1523 aa36.93■■■■□ 3.5
SPOCK3-221ENST00000512648 PHLDB1Q86UU1 1377 aa36.91■■■■□ 3.5
SPOCK3-221ENST00000512648 ABCA8O94911 1581 aa36.86■■■■□ 3.49
SPOCK3-221ENST00000512648 PTPRGP23470 1445 aa36.86■■■■□ 3.49
SPOCK3-221ENST00000512648 PLB1Q6P1J6 1458 aa36.84■■■■□ 3.49
SPOCK3-221ENST00000512648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.84■■■■□ 3.49
SPOCK3-221ENST00000512648 ARHGEF11O15085 1522 aa36.81■■■■□ 3.48
SPOCK3-221ENST00000512648 CDK13Q14004 1512 aaKnown RBP36.81■■■■□ 3.48
SPOCK3-221ENST00000512648 MAGI3Q5TCQ9 1506 aa36.81■■■■□ 3.48
SPOCK3-221ENST00000512648 CDK11AQ9UQ88 783 aaPredicted RBP36.81■■■■□ 3.48
SPOCK3-221ENST00000512648 NCOA2Q15596 1464 aa36.78■■■■□ 3.48
SPOCK3-221ENST00000512648 SUPT6HQ7KZ85 1726 aaKnown RBP36.78■■■■□ 3.48
SPOCK3-221ENST00000512648 HNRNPUL2Q1KMD3 747 aaKnown RBP36.74■■■■□ 3.47
SPOCK3-221ENST00000512648 ZEB1P37275 1124 aaPredicted RBP36.69■■■■□ 3.46
SPOCK3-221ENST00000512648 MYOM3Q5VTT5 1437 aa36.68■■■■□ 3.46
SPOCK3-221ENST00000512648 FGD6Q6ZV73 1430 aa36.68■■■■□ 3.46
SPOCK3-221ENST00000512648 UACAQ9BZF9 1416 aa36.67■■■■□ 3.46
SPOCK3-221ENST00000512648 OSCARQ8IYS5 282 aa36.65■■■■□ 3.46
SPOCK3-221ENST00000512648 TROQ12816 1431 aaPredicted RBP36.64■■■■□ 3.46
SPOCK3-221ENST00000512648 ATP10BO94823 1461 aa36.64■■■■□ 3.46
SPOCK3-221ENST00000512648 ERCC6L2Q5T890 1561 aa36.63■■■■□ 3.45
SPOCK3-221ENST00000512648 MIA2Q96PC5 1412 aa36.57■■■■□ 3.45
SPOCK3-221ENST00000512648 ARID3CA6NKF2 412 aa36.57■■■■□ 3.45
SPOCK3-221ENST00000512648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.56■■■■□ 3.44
SPOCK3-221ENST00000512648 UHRF1BP1LA0JNW5 1464 aa36.54■■■■□ 3.44
SPOCK3-221ENST00000512648 PLEKHD1A6NEE1 506 aa36.52■■■■□ 3.44
SPOCK3-221ENST00000512648 FAM50AQ14320 339 aaKnown RBP36.51■■■■□ 3.44
SPOCK3-221ENST00000512648 ABCC2Q92887 1545 aa36.51■■■■□ 3.44
SPOCK3-221ENST00000512648 TCOF1Q13428 1488 aaKnown RBP36.5■■■■□ 3.43
SPOCK3-221ENST00000512648 ADCY10Q96PN6 1610 aa36.49■■■■□ 3.43
SPOCK3-221ENST00000512648 CCER1Q8TC90 406 aaPredicted RBP36.46■■■■□ 3.43
SPOCK3-221ENST00000512648 PTPN23Q9H3S7 1636 aa36.41■■■■□ 3.42
SPOCK3-221ENST00000512648 ITGAEP38570 1179 aa36.35■■■■□ 3.41
SPOCK3-221ENST00000512648 KDM5BQ9UGL1 1544 aa36.34■■■■□ 3.41
SPOCK3-221ENST00000512648 ABCC10Q5T3U5 1492 aa36.31■■■■□ 3.4
SPOCK3-221ENST00000512648 SETD5Q9C0A6 1442 aa36.3■■■■□ 3.4
SPOCK3-221ENST00000512648 GPATCH8Q9UKJ3 1502 aaKnown RBP36.3■■■■□ 3.4
SPOCK3-221ENST00000512648 KIF14Q15058 1648 aa36.29■■■■□ 3.4
SPOCK3-221ENST00000512648 ITSN2Q9NZM3 1697 aa36.24■■■■□ 3.39
SPOCK3-221ENST00000512648 CLSPNQ9HAW4 1339 aa36.23■■■■□ 3.39
SPOCK3-221ENST00000512648 PTPRKQ15262 1439 aa36.23■■■■□ 3.39
SPOCK3-221ENST00000512648 CFDP1Q9UEE9 299 aaPredicted RBP36.2■■■■□ 3.39
SPOCK3-221ENST00000512648 RAB3GAP2Q9H2M9 1393 aa36.2■■■■□ 3.39
SPOCK3-221ENST00000512648 HFM1A2PYH4 1435 aa36.17■■■■□ 3.38
SPOCK3-221ENST00000512648 ZCCHC11Q5TAX3 1644 aaKnown RBP36.16■■■■□ 3.38
SPOCK3-221ENST00000512648 AKNAQ7Z591 1439 aa36.15■■■■□ 3.38
SPOCK3-221ENST00000512648 DHX57Q6P158 1386 aaKnown RBP36.14■■■■□ 3.38
SPOCK3-221ENST00000512648 DAPK1P53355 1430 aa36.07■■■■□ 3.37
SPOCK3-221ENST00000512648 CAMSAP2Q08AD1 1489 aa36.07■■■■□ 3.36
SPOCK3-221ENST00000512648 DNMT1P26358 1616 aaKnown RBP36.06■■■■□ 3.36
SPOCK3-221ENST00000512648 ROCK1Q13464 1354 aa36.06■■■■□ 3.36
SPOCK3-221ENST00000512648 CDC42BPAQ5VT25 1732 aa36.06■■■■□ 3.36
SPOCK3-221ENST00000512648 ZNF644Q9H582 1327 aaPredicted RBP36.06■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms