RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 CLIP1P30622 1438 aa20.85■□□□□ 0.93
SNCAIP-217ENST00000512385 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
SNCAIP-217ENST00000512385 THOC2Q8NI27 1593 aaKnown RBP20.84■□□□□ 0.93
SNCAIP-217ENST00000512385 WDR97A6NE52 1622 aa20.81■□□□□ 0.92
SNCAIP-217ENST00000512385 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
SNCAIP-217ENST00000512385 ABCA5Q8WWZ7 1642 aa20.77■□□□□ 0.92
SNCAIP-217ENST00000512385 FBLN2P98095 1184 aa20.77■□□□□ 0.91
SNCAIP-217ENST00000512385 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
SNCAIP-217ENST00000512385 MIER1Q8N108 512 aa20.73■□□□□ 0.91
SNCAIP-217ENST00000512385 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
SNCAIP-217ENST00000512385 ARAP1Q96P48 1450 aa20.66■□□□□ 0.9
SNCAIP-217ENST00000512385 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.9
SNCAIP-217ENST00000512385 GRIN2BQ13224 1484 aa20.63■□□□□ 0.89
SNCAIP-217ENST00000512385 SNAPC4Q5SXM2 1469 aa20.63■□□□□ 0.89
SNCAIP-217ENST00000512385 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
SNCAIP-217ENST00000512385 ATP1B4Q9UN42 357 aaPredicted RBP20.62■□□□□ 0.89
SNCAIP-217ENST00000512385 PBRM1Q86U86 1689 aa20.62■□□□□ 0.89
SNCAIP-217ENST00000512385 CUL7Q14999 1698 aa20.59■□□□□ 0.89
SNCAIP-217ENST00000512385 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
SNCAIP-217ENST00000512385 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
SNCAIP-217ENST00000512385 FHAD1B1AJZ9 1412 aa20.57■□□□□ 0.88
SNCAIP-217ENST00000512385 FHOD3Q2V2M9 1422 aa20.55■□□□□ 0.88
SNCAIP-217ENST00000512385 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
SNCAIP-217ENST00000512385 ADAMTS12P58397 1594 aa20.52■□□□□ 0.88
SNCAIP-217ENST00000512385 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
SNCAIP-217ENST00000512385 APLP2Q06481 763 aa20.51■□□□□ 0.87
SNCAIP-217ENST00000512385 ARID3CA6NKF2 412 aa20.49■□□□□ 0.87
SNCAIP-217ENST00000512385 GRIN2AQ12879 1464 aa20.43■□□□□ 0.86
SNCAIP-217ENST00000512385 CTTNBP2Q8WZ74 1663 aa20.42■□□□□ 0.86
SNCAIP-217ENST00000512385 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
SNCAIP-217ENST00000512385 MAGI1Q96QZ7 1491 aaPredicted RBP20.38■□□□□ 0.85
SNCAIP-217ENST00000512385 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
SNCAIP-217ENST00000512385 IQGAP2Q13576 1575 aa20.33■□□□□ 0.84
SNCAIP-217ENST00000512385 JPH4Q96JJ6 628 aa20.31■□□□□ 0.84
SNCAIP-217ENST00000512385 SUPT16HQ9Y5B9 1047 aaKnown RBP20.29■□□□□ 0.84
SNCAIP-217ENST00000512385 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
SNCAIP-217ENST00000512385 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
SNCAIP-217ENST00000512385 SAMD9Q5K651 1589 aa20.24■□□□□ 0.83
SNCAIP-217ENST00000512385 EFCAB5A4FU69 1503 aa20.24■□□□□ 0.83
SNCAIP-217ENST00000512385 DISP1Q96F81 1524 aa20.22■□□□□ 0.83
SNCAIP-217ENST00000512385 NUP160Q12769 1436 aa20.22■□□□□ 0.83
SNCAIP-217ENST00000512385 ITGAEP38570 1179 aa20.21■□□□□ 0.83
SNCAIP-217ENST00000512385 CHD1O14646 1710 aa20.21■□□□□ 0.83
SNCAIP-217ENST00000512385 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
SNCAIP-217ENST00000512385 TSHZ2Q9NRE2 1034 aa20.18■□□□□ 0.82
SNCAIP-217ENST00000512385 CASKIN1Q8WXD9 1431 aa20.17■□□□□ 0.82
SNCAIP-217ENST00000512385 UGGT2Q9NYU1 1516 aa20.16■□□□□ 0.82
SNCAIP-217ENST00000512385 TIAM1Q13009 1591 aa20.15■□□□□ 0.82
SNCAIP-217ENST00000512385 KIAA0556O60303 1618 aa20.12■□□□□ 0.81
SNCAIP-217ENST00000512385 PRG4Q92954 1404 aaPredicted RBP20.12■□□□□ 0.81
SNCAIP-217ENST00000512385 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
SNCAIP-217ENST00000512385 LRRC9Q6ZRR7 1453 aa20.11■□□□□ 0.81
SNCAIP-217ENST00000512385 FYCO1Q9BQS8 1478 aa20.11■□□□□ 0.81
SNCAIP-217ENST00000512385 LRRIQ1Q96JM4 1722 aa20.11■□□□□ 0.81
SNCAIP-217ENST00000512385 CDK13Q14004 1512 aaKnown RBP20.1■□□□□ 0.81
SNCAIP-217ENST00000512385 PHLDB1Q86UU1 1377 aa20.1■□□□□ 0.81
SNCAIP-217ENST00000512385 BCANQ96GW7 911 aa20.09■□□□□ 0.81
SNCAIP-217ENST00000512385 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
SNCAIP-217ENST00000512385 KCNH8Q96L42 1107 aa20.08■□□□□ 0.81
SNCAIP-217ENST00000512385 MTUS2Q5JR59 1369 aa20.07■□□□□ 0.8
SNCAIP-217ENST00000512385 ANP32EQ9BTT0 268 aa20.06■□□□□ 0.8
SNCAIP-217ENST00000512385 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
SNCAIP-217ENST00000512385 CARMIL2Q6F5E8 1435 aa20.03■□□□□ 0.8
SNCAIP-217ENST00000512385 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
SNCAIP-217ENST00000512385 BCL11AQ9H165 835 aa20.02■□□□□ 0.8
SNCAIP-217ENST00000512385 EPRSP07814 1512 aaKnown RBP20.01■□□□□ 0.79
SNCAIP-217ENST00000512385 NUP153P49790 1475 aaKnown RBP20■□□□□ 0.79
SNCAIP-217ENST00000512385 CFAP43Q8NDM7 1665 aa19.98■□□□□ 0.79
SNCAIP-217ENST00000512385 PTPRGP23470 1445 aa19.97■□□□□ 0.79
SNCAIP-217ENST00000512385 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
SNCAIP-217ENST00000512385 MAP3K1Q13233 1512 aa19.95■□□□□ 0.78
SNCAIP-217ENST00000512385 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
SNCAIP-217ENST00000512385 HECW1Q76N89 1606 aa19.92■□□□□ 0.78
SNCAIP-217ENST00000512385 RAPGEF6Q8TEU7 1601 aa19.92■□□□□ 0.78
SNCAIP-217ENST00000512385 RRBP1Q9P2E9 1410 aaKnown RBP19.91■□□□□ 0.78
SNCAIP-217ENST00000512385 NCOA2Q15596 1464 aa19.9■□□□□ 0.78
SNCAIP-217ENST00000512385 DHX57Q6P158 1386 aaKnown RBP19.9■□□□□ 0.78
SNCAIP-217ENST00000512385 CLASP1Q7Z460 1538 aa19.87■□□□□ 0.77
SNCAIP-217ENST00000512385 ZNF644Q9H582 1327 aaPredicted RBP19.86■□□□□ 0.77
SNCAIP-217ENST00000512385 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
SNCAIP-217ENST00000512385 FKBP8Q14318 412 aa19.85■□□□□ 0.77
SNCAIP-217ENST00000512385 CLSPNQ9HAW4 1339 aa19.84■□□□□ 0.77
SNCAIP-217ENST00000512385 ATP10BO94823 1461 aa19.84■□□□□ 0.77
SNCAIP-217ENST00000512385 SHROOM2Q13796 1616 aa19.83■□□□□ 0.77
SNCAIP-217ENST00000512385 CHIC2Q9UKJ5 165 aa19.83■□□□□ 0.77
SNCAIP-217ENST00000512385 ZNF777Q9ULD5 760 aaPredicted RBP19.82■□□□□ 0.76
SNCAIP-217ENST00000512385 FGD6Q6ZV73 1430 aa19.81■□□□□ 0.76
SNCAIP-217ENST00000512385 ABCA8O94911 1581 aa19.8■□□□□ 0.76
SNCAIP-217ENST00000512385 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
SNCAIP-217ENST00000512385 CDK11AQ9UQ88 783 aaPredicted RBP19.8■□□□□ 0.76
SNCAIP-217ENST00000512385 EHBP1L1Q8N3D4 1523 aa19.79■□□□□ 0.76
SNCAIP-217ENST00000512385 UACAQ9BZF9 1416 aa19.79■□□□□ 0.76
SNCAIP-217ENST00000512385 MYOM3Q5VTT5 1437 aa19.77■□□□□ 0.76
SNCAIP-217ENST00000512385 SUPT6HQ7KZ85 1726 aaKnown RBP19.76■□□□□ 0.75
SNCAIP-217ENST00000512385 PTPRKQ15262 1439 aa19.75■□□□□ 0.75
SNCAIP-217ENST00000512385 KIF14Q15058 1648 aa19.74■□□□□ 0.75
SNCAIP-217ENST00000512385 TROQ12816 1431 aaPredicted RBP19.72■□□□□ 0.75
SNCAIP-217ENST00000512385 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
SNCAIP-217ENST00000512385 RBM19Q9Y4C8 960 aaKnown RBP19.71■□□□□ 0.75
SNCAIP-217ENST00000512385 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms