RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-205ENST00000507692 TRIM41Q8WV44 630 aa8.55□□□□□ -1.04
SNHG4-205ENST00000507692 ARAP1Q96P48 1450 aa8.54□□□□□ -1.04
SNHG4-205ENST00000507692 IGF1RP08069 1367 aa8.54□□□□□ -1.04
SNHG4-205ENST00000507692 ERCC6L2Q5T890 1561 aa8.52□□□□□ -1.04
SNHG4-205ENST00000507692 CARMIL1Q5VZK9 1371 aa8.51□□□□□ -1.05
SNHG4-205ENST00000507692 IQGAP2Q13576 1575 aa8.51□□□□□ -1.05
SNHG4-205ENST00000507692 RAPGEF2Q9Y4G8 1499 aa8.5□□□□□ -1.05
SNHG4-205ENST00000507692 KIAA0586Q9BVV6 1533 aa8.49□□□□□ -1.05
SNHG4-205ENST00000507692 CYB5RLQ6IPT4 315 aa8.48□□□□□ -1.05
SNHG4-205ENST00000507692 KIF13AQ9H1H9 1805 aa8.46□□□□□ -1.06
SNHG4-205ENST00000507692 EEA1Q15075 1411 aa8.46□□□□□ -1.06
SNHG4-205ENST00000507692 PRG4Q92954 1404 aaPredicted RBP8.46□□□□□ -1.06
SNHG4-205ENST00000507692 JPH4Q96JJ6 628 aa8.45□□□□□ -1.06
SNHG4-205ENST00000507692 KIF21BO75037 1637 aa8.44□□□□□ -1.06
SNHG4-205ENST00000507692 PRXQ9BXM0 1461 aa8.44□□□□□ -1.06
SNHG4-205ENST00000507692 KIAA0556O60303 1618 aa8.43□□□□□ -1.06
SNHG4-205ENST00000507692 UGGT2Q9NYU1 1516 aa8.42□□□□□ -1.06
SNHG4-205ENST00000507692 ADCY10Q96PN6 1610 aa8.42□□□□□ -1.06
SNHG4-205ENST00000507692 CARMIL2Q6F5E8 1435 aa8.41□□□□□ -1.06
SNHG4-205ENST00000507692 TSPOAP1O95153 1857 aa8.4□□□□□ -1.06
SNHG4-205ENST00000507692 CSRNP3Q8WYN3 585 aa8.39□□□□□ -1.07
SNHG4-205ENST00000507692 DISP1Q96F81 1524 aa8.39□□□□□ -1.07
SNHG4-205ENST00000507692 GOLGA3Q08378 1498 aa8.38□□□□□ -1.07
SNHG4-205ENST00000507692 SAMD9Q5K651 1589 aa8.37□□□□□ -1.07
SNHG4-205ENST00000507692 ZCCHC11Q5TAX3 1644 aaKnown RBP8.36□□□□□ -1.07
SNHG4-205ENST00000507692 TNIKQ9UKE5 1360 aa8.35□□□□□ -1.07
SNHG4-205ENST00000507692 FAM9AQ8IZU1 332 aaPredicted RBP8.35□□□□□ -1.07
SNHG4-205ENST00000507692 PTPRGP23470 1445 aa8.35□□□□□ -1.07
SNHG4-205ENST00000507692 MAPKBP1O60336 1514 aa8.34□□□□□ -1.07
SNHG4-205ENST00000507692 ABCC2Q92887 1545 aa8.34□□□□□ -1.08
SNHG4-205ENST00000507692 TRHP20396 242 aaPredicted RBP8.33□□□□□ -1.08
SNHG4-205ENST00000507692 EFCAB5A4FU69 1503 aa8.32□□□□□ -1.08
SNHG4-205ENST00000507692 RAPGEF6Q8TEU7 1601 aa8.32□□□□□ -1.08
SNHG4-205ENST00000507692 UHRF1BP1LA0JNW5 1464 aa8.32□□□□□ -1.08
SNHG4-205ENST00000507692 TTBK1Q5TCY1 1321 aaPredicted RBP8.31□□□□□ -1.08
SNHG4-205ENST00000507692 ABCA8O94911 1581 aa8.31□□□□□ -1.08
SNHG4-205ENST00000507692 DIP2BQ9P265 1576 aa8.31□□□□□ -1.08
SNHG4-205ENST00000507692 NPM1P06748 294 aaKnown RBP eCLIP8.31□□□□□ -1.08
SNHG4-205ENST00000507692 UACAQ9BZF9 1416 aa8.3□□□□□ -1.08
SNHG4-205ENST00000507692 LRRIQ1Q96JM4 1722 aa8.29□□□□□ -1.08
SNHG4-205ENST00000507692 KDM5BQ9UGL1 1544 aa8.28□□□□□ -1.08
SNHG4-205ENST00000507692 PPRC1Q5VV67 1664 aaKnown RBP8.27□□□□□ -1.08
SNHG4-205ENST00000507692 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.08
SNHG4-205ENST00000507692 ABCC10Q5T3U5 1492 aa8.27□□□□□ -1.09
SNHG4-205ENST00000507692 PLB1Q6P1J6 1458 aa8.27□□□□□ -1.09
SNHG4-205ENST00000507692 MAP3K4Q9Y6R4 1608 aa8.27□□□□□ -1.09
SNHG4-205ENST00000507692 UBTFP17480 764 aaKnown RBP8.26□□□□□ -1.09
SNHG4-205ENST00000507692 GLI2P10070 1586 aa8.26□□□□□ -1.09
SNHG4-205ENST00000507692 EHMT2Q96KQ7 1210 aa8.25□□□□□ -1.09
SNHG4-205ENST00000507692 ASXL2Q76L83 1435 aa8.24□□□□□ -1.09
SNHG4-205ENST00000507692 RANGAP1P46060 587 aaPredicted RBP8.24□□□□□ -1.09
SNHG4-205ENST00000507692 P3H3Q8IVL6 736 aa8.24□□□□□ -1.09
SNHG4-205ENST00000507692 FHOD3Q2V2M9 1422 aa8.23□□□□□ -1.09
SNHG4-205ENST00000507692 HECW1Q76N89 1606 aa8.23□□□□□ -1.09
SNHG4-205ENST00000507692 KDM6BO15054 1643 aa8.21□□□□□ -1.09
SNHG4-205ENST00000507692 ARHGAP35Q9NRY4 1499 aa8.21□□□□□ -1.09
SNHG4-205ENST00000507692 WDR7Q9Y4E6 1490 aa8.21□□□□□ -1.09
SNHG4-205ENST00000507692 FAM69CQ0P6D2 419 aa8.21□□□□□ -1.1
SNHG4-205ENST00000507692 MYO5CQ9NQX4 1742 aa8.2□□□□□ -1.1
SNHG4-205ENST00000507692 EPRSP07814 1512 aaKnown RBP8.2□□□□□ -1.1
SNHG4-205ENST00000507692 ABCA9Q8IUA7 1624 aa8.2□□□□□ -1.1
SNHG4-205ENST00000507692 ATP10BO94823 1461 aa8.19□□□□□ -1.1
SNHG4-205ENST00000507692 NUP153P49790 1475 aaKnown RBP8.19□□□□□ -1.1
SNHG4-205ENST00000507692 FMN1Q68DA7 1419 aa8.19□□□□□ -1.1
SNHG4-205ENST00000507692 PCF11O94913 1555 aaKnown RBP8.18□□□□□ -1.1
SNHG4-205ENST00000507692 POTEDQ86YR6 584 aa8.18□□□□□ -1.1
SNHG4-205ENST00000507692 CDK13Q14004 1512 aaKnown RBP8.16□□□□□ -1.1
SNHG4-205ENST00000507692 TEX14Q8IWB6 1497 aa8.16□□□□□ -1.1
SNHG4-205ENST00000507692 CFAP74Q9C0B2 1584 aa8.16□□□□□ -1.1
SNHG4-205ENST00000507692 CLIP1P30622 1438 aa8.15□□□□□ -1.1
SNHG4-205ENST00000507692 ARID3CA6NKF2 412 aa8.15□□□□□ -1.1
SNHG4-205ENST00000507692 CDC42BPAQ5VT25 1732 aa8.15□□□□□ -1.11
SNHG4-205ENST00000507692 CDC42BPBQ9Y5S2 1711 aa8.15□□□□□ -1.11
SNHG4-205ENST00000507692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.14□□□□□ -1.11
SNHG4-205ENST00000507692 HNRNPUL2Q1KMD3 747 aaKnown RBP8.14□□□□□ -1.11
SNHG4-205ENST00000507692 KIF14Q15058 1648 aa8.14□□□□□ -1.11
SNHG4-205ENST00000507692 TTC37Q6PGP7 1564 aa8.14□□□□□ -1.11
SNHG4-205ENST00000507692 KCNH8Q96L42 1107 aa8.13□□□□□ -1.11
SNHG4-205ENST00000507692 MAGI3Q5TCQ9 1506 aa8.13□□□□□ -1.11
SNHG4-205ENST00000507692 CCDC18Q5T9S5 1454 aa8.13□□□□□ -1.11
SNHG4-205ENST00000507692 FYCO1Q9BQS8 1478 aa8.13□□□□□ -1.11
SNHG4-205ENST00000507692 CD109Q6YHK3 1445 aa8.12□□□□□ -1.11
SNHG4-205ENST00000507692 RICTORQ6R327 1708 aa8.12□□□□□ -1.11
SNHG4-205ENST00000507692 MSH5O43196 834 aa8.12□□□□□ -1.11
SNHG4-205ENST00000507692 CEP162Q5TB80 1403 aa8.12□□□□□ -1.11
SNHG4-205ENST00000507692 CASKIN1Q8WXD9 1431 aa8.12□□□□□ -1.11
SNHG4-205ENST00000507692 ATP1B4Q9UN42 357 aaPredicted RBP8.11□□□□□ -1.11
SNHG4-205ENST00000507692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.11□□□□□ -1.112e-37■□□□□ 9.1
SNHG4-205ENST00000507692 PLEKHD1A6NEE1 506 aa8.1□□□□□ -1.11
SNHG4-205ENST00000507692 PREX2Q70Z35 1606 aa8.1□□□□□ -1.11
SNHG4-205ENST00000507692 ITSN2Q9NZM3 1697 aa8.09□□□□□ -1.11
SNHG4-205ENST00000507692 SUPT6HQ7KZ85 1726 aaKnown RBP8.07□□□□□ -1.12
SNHG4-205ENST00000507692 CDK11AQ9UQ88 783 aaPredicted RBP8.07□□□□□ -1.12
SNHG4-205ENST00000507692 ARAP3Q8WWN8 1544 aa8.07□□□□□ -1.12
SNHG4-205ENST00000507692 NEO1Q92859 1461 aa8.06□□□□□ -1.12
SNHG4-205ENST00000507692 TROQ12816 1431 aaPredicted RBP8.06□□□□□ -1.12
SNHG4-205ENST00000507692 LOC105371045A0A1W2PR82 267 aa8.06□□□□□ -1.12
SNHG4-205ENST00000507692 FRMPD1Q5SYB0 1578 aa8.05□□□□□ -1.12
SNHG4-205ENST00000507692 PHLDB1Q86UU1 1377 aa8.05□□□□□ -1.12
SNHG4-205ENST00000507692 FANCAO15360 1455 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms