RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-205ENST00000507692 NISCHQ9Y2I1 1504 aa12.29□□□□□ -0.44
SNHG4-205ENST00000507692 CCDC180Q9P1Z9 1646 aa11.08□□□□□ -0.64
SNHG4-205ENST00000507692 AEBP2Q6ZN18 517 aaPredicted RBP10.71□□□□□ -0.69
SNHG4-205ENST00000507692 ABCC9O60706 1549 aa10.69□□□□□ -0.7
SNHG4-205ENST00000507692 RB1CC1Q8TDY2 1594 aa10.36□□□□□ -0.75
SNHG4-205ENST00000507692 NACADO15069 1562 aa10.33□□□□□ -0.76
SNHG4-205ENST00000507692 UNC13AQ9UPW8 1703 aa10.31□□□□□ -0.76
SNHG4-205ENST00000507692 ZCCHC6Q5VYS8 1495 aaKnown RBP10.23□□□□□ -0.77
SNHG4-205ENST00000507692 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
SNHG4-205ENST00000507692 DCAF8L2P0C7V8 631 aa10.2□□□□□ -0.78
SNHG4-205ENST00000507692 DCAF1Q9Y4B6 1507 aa10.19□□□□□ -0.78
SNHG4-205ENST00000507692 CHIC1Q5VXU3 224 aa10.07□□□□□ -0.8
SNHG4-205ENST00000507692 BICRAQ9NZM4 1560 aa10.03□□□□□ -0.8
SNHG4-205ENST00000507692 SCRIBQ14160 1630 aa10.03□□□□□ -0.8
SNHG4-205ENST00000507692 PABPN1Q86U42 306 aaKnown RBP eCLIP9.92□□□□□ -0.82
SNHG4-205ENST00000507692 SHROOM4Q9ULL8 1493 aa9.91□□□□□ -0.82
SNHG4-205ENST00000507692 EIF4G1Q04637 1599 aaKnown RBP9.76□□□□□ -0.85
SNHG4-205ENST00000507692 CC2D2AQ9P2K1 1620 aa9.75□□□□□ -0.85
SNHG4-205ENST00000507692 DNAJC5BQ9UF47 199 aa9.75□□□□□ -0.85
SNHG4-205ENST00000507692 CECR2Q9BXF3 1484 aa9.61□□□□□ -0.87
SNHG4-205ENST00000507692 SMARCA4P51532 1647 aa9.6□□□□□ -0.87
SNHG4-205ENST00000507692 BAZ1AQ9NRL2 1556 aaPredicted RBP9.56□□□□□ -0.88
SNHG4-205ENST00000507692 SMARCA2P51531 1590 aa9.52□□□□□ -0.89
SNHG4-205ENST00000507692 PEG3Q9GZU2 1588 aa9.49□□□□□ -0.89
SNHG4-205ENST00000507692 HMGXB3Q12766 1538 aa9.48□□□□□ -0.89
SNHG4-205ENST00000507692 ATAD2BQ9ULI0 1458 aa9.47□□□□□ -0.89
SNHG4-205ENST00000507692 MROH2BQ7Z745 1585 aa9.46□□□□□ -0.89
SNHG4-205ENST00000507692 NCAPD3P42695 1498 aa9.46□□□□□ -0.9
SNHG4-205ENST00000507692 WIZO95785 1651 aa9.45□□□□□ -0.9
SNHG4-205ENST00000507692 BAZ1BQ9UIG0 1483 aaKnown RBP9.41□□□□□ -0.9
SNHG4-205ENST00000507692 PRDM2Q13029 1718 aa9.35□□□□□ -0.91
SNHG4-205ENST00000507692 RSF1Q96T23 1441 aaPredicted RBP9.31□□□□□ -0.92
SNHG4-205ENST00000507692 KIF21AQ7Z4S6 1674 aa9.3□□□□□ -0.92
SNHG4-205ENST00000507692 LAMC3Q9Y6N6 1575 aa9.3□□□□□ -0.92
SNHG4-205ENST00000507692 TOP2AP11388 1531 aaKnown RBP9.3□□□□□ -0.92
SNHG4-205ENST00000507692 NESP48681 1621 aa9.25□□□□□ -0.93
SNHG4-205ENST00000507692 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
SNHG4-205ENST00000507692 SENP3Q9H4L4 574 aaPredicted RBP9.2□□□□□ -0.94
SNHG4-205ENST00000507692 THOC2Q8NI27 1593 aaKnown RBP9.2□□□□□ -0.94
SNHG4-205ENST00000507692 PDS5BQ9NTI5 1447 aa9.16□□□□□ -0.94
SNHG4-205ENST00000507692 CADPSQ9ULU8 1353 aa9.16□□□□□ -0.94
SNHG4-205ENST00000507692 CUX2O14529 1486 aa9.15□□□□□ -0.94
SNHG4-205ENST00000507692 CCDC88BA6NC98 1476 aa9.15□□□□□ -0.95
SNHG4-205ENST00000507692 CFTRP13569 1480 aa9.13□□□□□ -0.95
SNHG4-205ENST00000507692 CEP164Q9UPV0 1460 aa9.11□□□□□ -0.95
SNHG4-205ENST00000507692 FANCD2Q9BXW9 1451 aa9.09□□□□□ -0.95
SNHG4-205ENST00000507692 WDR62O43379 1518 aa9.09□□□□□ -0.95
SNHG4-205ENST00000507692 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
SNHG4-205ENST00000507692 PHF23Q9BUL5 403 aaPredicted RBP9.06□□□□□ -0.96
SNHG4-205ENST00000507692 SUPT5HO00267 1087 aaKnown RBP9.04□□□□□ -0.96
SNHG4-205ENST00000507692 URB2Q14146 1524 aaKnown RBP9□□□□□ -0.97
SNHG4-205ENST00000507692 DNMBPQ6XZF7 1577 aa8.99□□□□□ -0.97
SNHG4-205ENST00000507692 ABCC8Q09428 1581 aa8.98□□□□□ -0.97
SNHG4-205ENST00000507692 TOPBP1Q92547 1522 aa8.96□□□□□ -0.97
SNHG4-205ENST00000507692 TARBP1Q13395 1621 aaKnown RBP8.92□□□□□ -0.98
SNHG4-205ENST00000507692 WDR97A6NE52 1622 aa8.91□□□□□ -0.98
SNHG4-205ENST00000507692 BIVM-ERCC5R4GMW8 1640 aa8.91□□□□□ -0.98
SNHG4-205ENST00000507692 EIF4G3O43432 1585 aaKnown RBP8.9□□□□□ -0.99
SNHG4-205ENST00000507692 CUX1P39880 1505 aa8.9□□□□□ -0.99
SNHG4-205ENST00000507692 IFT140Q96RY7 1462 aa8.89□□□□□ -0.99
SNHG4-205ENST00000507692 PBRM1Q86U86 1689 aa8.89□□□□□ -0.99
SNHG4-205ENST00000507692 CHD1O14646 1710 aa8.88□□□□□ -0.99
SNHG4-205ENST00000507692 POLA1P09884 1462 aaPredicted RBP8.88□□□□□ -0.99
SNHG4-205ENST00000507692 TOP2BQ02880 1626 aa8.87□□□□□ -0.99
SNHG4-205ENST00000507692 FGD5Q6ZNL6 1462 aa8.85□□□□□ -0.99
SNHG4-205ENST00000507692 SYNJ1O43426 1573 aa8.84□□□□□ -0.99
SNHG4-205ENST00000507692 ZNF608Q9ULD9 1512 aaPredicted RBP8.84□□□□□ -0.99
SNHG4-205ENST00000507692 RAD54L2Q9Y4B4 1467 aa8.82□□□□□ -1
SNHG4-205ENST00000507692 SOGA1O94964 1423 aa8.81□□□□□ -1
SNHG4-205ENST00000507692 DNAJC5Q9H3Z4 198 aa8.81□□□□□ -1
SNHG4-205ENST00000507692 ABCA5Q8WWZ7 1642 aa8.8□□□□□ -1
SNHG4-205ENST00000507692 WRNQ14191 1432 aaPredicted RBP eCLIP8.8□□□□□ -1
SNHG4-205ENST00000507692 AQRO60306 1485 aaKnown RBP eCLIP8.78□□□□□ -14e-10■■■■■ 32.5
SNHG4-205ENST00000507692 ABCA10Q8WWZ4 1543 aa8.77□□□□□ -1.01
SNHG4-205ENST00000507692 GAPVD1Q14C86 1478 aa8.74□□□□□ -1.01
SNHG4-205ENST00000507692 TDRD9Q8NDG6 1382 aaKnown RBP8.73□□□□□ -1.01
SNHG4-205ENST00000507692 GRIN2BQ13224 1484 aa8.73□□□□□ -1.01
SNHG4-205ENST00000507692 SNAPC4Q5SXM2 1469 aa8.73□□□□□ -1.01
SNHG4-205ENST00000507692 MAGI1Q96QZ7 1491 aaPredicted RBP8.73□□□□□ -1.01
SNHG4-205ENST00000507692 OSCARQ8IYS5 282 aa8.71□□□□□ -1.02
SNHG4-205ENST00000507692 ADAMTS12P58397 1594 aa8.7□□□□□ -1.02
SNHG4-205ENST00000507692 ERICH3Q5RHP9 1530 aa8.7□□□□□ -1.02
SNHG4-205ENST00000507692 RIMBP3CA6NJZ7 1639 aa8.69□□□□□ -1.02
SNHG4-205ENST00000507692 RIMBP3BA6NNM3 1639 aa8.69□□□□□ -1.02
SNHG4-205ENST00000507692 RIMBP3Q9UFD9 1639 aa8.69□□□□□ -1.02
SNHG4-205ENST00000507692 CUL7Q14999 1698 aa8.69□□□□□ -1.02
SNHG4-205ENST00000507692 SYNJ2O15056 1496 aa8.68□□□□□ -1.02
SNHG4-205ENST00000507692 FBLN2P98095 1184 aa8.66□□□□□ -1.02
SNHG4-205ENST00000507692 CLASP1Q7Z460 1538 aa8.65□□□□□ -1.02
SNHG4-205ENST00000507692 CHMP7Q8WUX9 453 aaPredicted RBP8.64□□□□□ -1.03
SNHG4-205ENST00000507692 ARHGEF11O15085 1522 aa8.63□□□□□ -1.03
SNHG4-205ENST00000507692 GRIN2AQ12879 1464 aa8.63□□□□□ -1.03
SNHG4-205ENST00000507692 CEP170Q5SW79 1584 aa8.62□□□□□ -1.03
SNHG4-205ENST00000507692 FHAD1B1AJZ9 1412 aa8.62□□□□□ -1.03
SNHG4-205ENST00000507692 KIF27Q86VH2 1401 aa8.62□□□□□ -1.03
SNHG4-205ENST00000507692 CTTNBP2Q8WZ74 1663 aa8.61□□□□□ -1.03
SNHG4-205ENST00000507692 SHROOM2Q13796 1616 aa8.61□□□□□ -1.03
SNHG4-205ENST00000507692 RUSC2Q8N2Y8 1516 aa8.59□□□□□ -1.03
SNHG4-205ENST00000507692 FOXD1Q16676 465 aa8.58□□□□□ -1.04
SNHG4-205ENST00000507692 NUP160Q12769 1436 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms