RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CUL7Q14999 1698 aa29.12■■■□□ 2.25
PDLIM7-215ENST00000506161 PRG4Q92954 1404 aaPredicted RBP29■■■□□ 2.23
PDLIM7-215ENST00000506161 JPH4Q96JJ6 628 aa28.95■■■□□ 2.22
PDLIM7-215ENST00000506161 CARMIL1Q5VZK9 1371 aa28.93■■■□□ 2.22
PDLIM7-215ENST00000506161 KIAA0586Q9BVV6 1533 aa28.9■■■□□ 2.22
PDLIM7-215ENST00000506161 ADCY10Q96PN6 1610 aa28.75■■■□□ 2.19
PDLIM7-215ENST00000506161 IQGAP2Q13576 1575 aa28.74■■■□□ 2.19
PDLIM7-215ENST00000506161 KIF13AQ9H1H9 1805 aa28.72■■■□□ 2.19
PDLIM7-215ENST00000506161 RAPGEF2Q9Y4G8 1499 aa28.72■■■□□ 2.19
PDLIM7-215ENST00000506161 CTTNBP2Q8WZ74 1663 aa28.64■■■□□ 2.17
PDLIM7-215ENST00000506161 DISP1Q96F81 1524 aa28.63■■■□□ 2.17
PDLIM7-215ENST00000506161 PRXQ9BXM0 1461 aa28.57■■■□□ 2.16
PDLIM7-215ENST00000506161 UGGT2Q9NYU1 1516 aa28.57■■■□□ 2.16
PDLIM7-215ENST00000506161 TTBK1Q5TCY1 1321 aaPredicted RBP28.55■■■□□ 2.16
PDLIM7-215ENST00000506161 FAM69CQ0P6D2 419 aa28.54■■■□□ 2.16
PDLIM7-215ENST00000506161 PTPRGP23470 1445 aa28.53■■■□□ 2.16
PDLIM7-215ENST00000506161 KIAA0556O60303 1618 aa28.53■■■□□ 2.16
PDLIM7-215ENST00000506161 MAPKBP1O60336 1514 aa28.53■■■□□ 2.16
PDLIM7-215ENST00000506161 ABCC10Q5T3U5 1492 aa28.52■■■□□ 2.16
PDLIM7-215ENST00000506161 TNIKQ9UKE5 1360 aa28.51■■■□□ 2.16
PDLIM7-215ENST00000506161 CARMIL2Q6F5E8 1435 aa28.51■■■□□ 2.15
PDLIM7-215ENST00000506161 DIP2BQ9P265 1576 aa28.49■■■□□ 2.15
PDLIM7-215ENST00000506161 NPM1P06748 294 aaKnown RBP eCLIP28.47■■■□□ 2.15
PDLIM7-215ENST00000506161 KDM4FA0A1W2PPD8 638 aa28.42■■■□□ 2.14
PDLIM7-215ENST00000506161 ABCC2Q92887 1545 aa28.39■■■□□ 2.14
PDLIM7-215ENST00000506161 UHRF1BP1LA0JNW5 1464 aa28.37■■■□□ 2.13
PDLIM7-215ENST00000506161 KDM6BO15054 1643 aa28.36■■■□□ 2.13
PDLIM7-215ENST00000506161 UACAQ9BZF9 1416 aa28.35■■■□□ 2.13
PDLIM7-215ENST00000506161 TSPOAP1O95153 1857 aa28.35■■■□□ 2.13
PDLIM7-215ENST00000506161 ILDR1Q86SU0 546 aaPredicted RBP28.33■■■□□ 2.13
PDLIM7-215ENST00000506161 CSRNP3Q8WYN3 585 aa28.33■■■□□ 2.13
PDLIM7-215ENST00000506161 ZCCHC11Q5TAX3 1644 aaKnown RBP28.32■■■□□ 2.12
PDLIM7-215ENST00000506161 PLB1Q6P1J6 1458 aa28.28■■■□□ 2.12
PDLIM7-215ENST00000506161 KDM5BQ9UGL1 1544 aa28.28■■■□□ 2.12
PDLIM7-215ENST00000506161 ASXL2Q76L83 1435 aa28.27■■■□□ 2.12
PDLIM7-215ENST00000506161 FAM9AQ8IZU1 332 aaPredicted RBP28.25■■■□□ 2.11
PDLIM7-215ENST00000506161 ABCA8O94911 1581 aa28.24■■■□□ 2.11
PDLIM7-215ENST00000506161 PPRC1Q5VV67 1664 aaKnown RBP28.24■■■□□ 2.11
PDLIM7-215ENST00000506161 GOLGA3Q08378 1498 aa28.23■■■□□ 2.11
PDLIM7-215ENST00000506161 CHIC1Q5VXU3 224 aa28.23■■■□□ 2.11
PDLIM7-215ENST00000506161 EEA1Q15075 1411 aa28.23■■■□□ 2.11
PDLIM7-215ENST00000506161 SAMD9Q5K651 1589 aa28.21■■■□□ 2.11
PDLIM7-215ENST00000506161 GLI2P10070 1586 aa28.16■■■□□ 2.1
PDLIM7-215ENST00000506161 KIF21BO75037 1637 aa28.16■■■□□ 2.1
PDLIM7-215ENST00000506161 P3H3Q8IVL6 736 aa28.15■■■□□ 2.1
PDLIM7-215ENST00000506161 EPRSP07814 1512 aaKnown RBP28.13■■■□□ 2.09
PDLIM7-215ENST00000506161 MAP3K4Q9Y6R4 1608 aa28.1■■■□□ 2.09
PDLIM7-215ENST00000506161 WDR7Q9Y4E6 1490 aa28.04■■■□□ 2.08
PDLIM7-215ENST00000506161 ADGRL1O94910 1474 aa28.02■■■□□ 2.08
PDLIM7-215ENST00000506161 RANGAP1P46060 587 aaPredicted RBP28.01■■■□□ 2.07
PDLIM7-215ENST00000506161 RAPGEF6Q8TEU7 1601 aa28■■■□□ 2.07
PDLIM7-215ENST00000506161 EHMT2Q96KQ7 1210 aa27.99■■■□□ 2.07
PDLIM7-215ENST00000506161 FHOD3Q2V2M9 1422 aa27.99■■■□□ 2.07
PDLIM7-215ENST00000506161 ARID3CA6NKF2 412 aa27.98■■■□□ 2.07
PDLIM7-215ENST00000506161 ATP10BO94823 1461 aa27.97■■■□□ 2.07
PDLIM7-215ENST00000506161 COL17A1Q9UMD9 1497 aaPredicted RBP27.95■■■□□ 2.06
PDLIM7-215ENST00000506161 CFAP43Q8NDM7 1665 aa27.91■■■□□ 2.06
PDLIM7-215ENST00000506161 NUP153P49790 1475 aaKnown RBP27.89■■■□□ 2.05
PDLIM7-215ENST00000506161 EFCAB5A4FU69 1503 aa27.87■■■□□ 2.05
PDLIM7-215ENST00000506161 HECW2Q9P2P5 1572 aa27.86■■■□□ 2.05
PDLIM7-215ENST00000506161 KCNH8Q96L42 1107 aa27.85■■■□□ 2.05
PDLIM7-215ENST00000506161 TEX14Q8IWB6 1497 aa27.79■■■□□ 2.04
PDLIM7-215ENST00000506161 CD109Q6YHK3 1445 aa27.79■■■□□ 2.04
PDLIM7-215ENST00000506161 MAGI3Q5TCQ9 1506 aa27.78■■■□□ 2.04
PDLIM7-215ENST00000506161 ARHGAP35Q9NRY4 1499 aa27.78■■■□□ 2.04
PDLIM7-215ENST00000506161 ABCA9Q8IUA7 1624 aa27.78■■■□□ 2.04
PDLIM7-215ENST00000506161 UBTFP17480 764 aaKnown RBP27.77■■■□□ 2.04
PDLIM7-215ENST00000506161 CDK13Q14004 1512 aaKnown RBP27.71■■■□□ 2.03
PDLIM7-215ENST00000506161 LRRIQ1Q96JM4 1722 aa27.7■■■□□ 2.03
PDLIM7-215ENST00000506161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.64■■■□□ 2.02
PDLIM7-215ENST00000506161 HNRNPUL2Q1KMD3 747 aaKnown RBP27.64■■■□□ 2.02
PDLIM7-215ENST00000506161 TTC37Q6PGP7 1564 aa27.6■■■□□ 2.01
PDLIM7-215ENST00000506161 HECW1Q76N89 1606 aa27.59■■■□□ 2.01
PDLIM7-215ENST00000506161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.58■■■□□ 2.012e-7■■□□□ 14.3
PDLIM7-215ENST00000506161 ARAP3Q8WWN8 1544 aa27.56■■■□□ 2
PDLIM7-215ENST00000506161 FRMPD1Q5SYB0 1578 aa27.54■■■□□ 2
PDLIM7-215ENST00000506161 FMN1Q68DA7 1419 aa27.54■■■□□ 2
PDLIM7-215ENST00000506161 FBXO41Q8TF61 875 aa27.54■■■□□ 2
PDLIM7-215ENST00000506161 PCF11O94913 1555 aaKnown RBP27.52■■■□□ 2
PDLIM7-215ENST00000506161 PLEKHD1A6NEE1 506 aa27.5■■□□□ 1.99
PDLIM7-215ENST00000506161 KIF14Q15058 1648 aa27.49■■□□□ 1.99
PDLIM7-215ENST00000506161 NEO1Q92859 1461 aa27.47■■□□□ 1.99
PDLIM7-215ENST00000506161 ATP1B4Q9UN42 357 aaPredicted RBP27.46■■□□□ 1.99
PDLIM7-215ENST00000506161 RICTORQ6R327 1708 aa27.44■■□□□ 1.98
PDLIM7-215ENST00000506161 RAPGEF3O95398 923 aa27.42■■□□□ 1.98
PDLIM7-215ENST00000506161 FANCAO15360 1455 aa27.38■■□□□ 1.97
PDLIM7-215ENST00000506161 MYO5CQ9NQX4 1742 aa27.38■■□□□ 1.97
PDLIM7-215ENST00000506161 PHLDB1Q86UU1 1377 aa27.37■■□□□ 1.97
PDLIM7-215ENST00000506161 CLIP1P30622 1438 aa27.37■■□□□ 1.97
PDLIM7-215ENST00000506161 CFAP74Q9C0B2 1584 aa27.36■■□□□ 1.97
PDLIM7-215ENST00000506161 AKNAQ7Z591 1439 aa27.36■■□□□ 1.97
PDLIM7-215ENST00000506161 CASKIN1Q8WXD9 1431 aa27.36■■□□□ 1.97
PDLIM7-215ENST00000506161 TROQ12816 1431 aaPredicted RBP27.33■■□□□ 1.97
PDLIM7-215ENST00000506161 SIGLEC1Q9BZZ2 1709 aa27.31■■□□□ 1.96
PDLIM7-215ENST00000506161 PLCH2O75038 1416 aa27.31■■□□□ 1.96
PDLIM7-215ENST00000506161 CDC42BPBQ9Y5S2 1711 aa27.3■■□□□ 1.96
PDLIM7-215ENST00000506161 DENND4BO75064 1496 aaPredicted RBP27.29■■□□□ 1.96
PDLIM7-215ENST00000506161 PTPRMP28827 1452 aa27.27■■□□□ 1.96
PDLIM7-215ENST00000506161 FYCO1Q9BQS8 1478 aa27.27■■□□□ 1.96
PDLIM7-215ENST00000506161 ARHGEF40Q8TER5 1519 aa27.26■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms