RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
TOPBP1-203ENST00000503464 CACNB1Q02641 598 aaPredicted RBP11.18□□□□□ -0.62
TOPBP1-203ENST00000503464 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
TOPBP1-203ENST00000503464 SNAPC4Q5SXM2 1469 aa11.16□□□□□ -0.62
TOPBP1-203ENST00000503464 UBTFP17480 764 aaKnown RBP11.15□□□□□ -0.62
TOPBP1-203ENST00000503464 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
TOPBP1-203ENST00000503464 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
TOPBP1-203ENST00000503464 CLIP1P30622 1438 aa11.1□□□□□ -0.63
TOPBP1-203ENST00000503464 SYNJ2O15056 1496 aa11.08□□□□□ -0.64
TOPBP1-203ENST00000503464 GRIN2AQ12879 1464 aa11.08□□□□□ -0.64
TOPBP1-203ENST00000503464 ARAP1Q96P48 1450 aa11.07□□□□□ -0.64
TOPBP1-203ENST00000503464 ARHGAP35Q9NRY4 1499 aa11.07□□□□□ -0.64
TOPBP1-203ENST00000503464 CHD1O14646 1710 aa11.07□□□□□ -0.64
TOPBP1-203ENST00000503464 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
TOPBP1-203ENST00000503464 SAMD9Q5K651 1589 aa11.04□□□□□ -0.64
TOPBP1-203ENST00000503464 IQGAP2Q13576 1575 aa11.03□□□□□ -0.64
TOPBP1-203ENST00000503464 EFCAB5A4FU69 1503 aa11.02□□□□□ -0.65
TOPBP1-203ENST00000503464 NUP160Q12769 1436 aa11.01□□□□□ -0.65
TOPBP1-203ENST00000503464 RANGAP1P46060 587 aaPredicted RBP11.01□□□□□ -0.65
TOPBP1-203ENST00000503464 VPS8Q8N3P4 1428 aa11.01□□□□□ -0.65
TOPBP1-203ENST00000503464 KIAA0586Q9BVV6 1533 aa10.99□□□□□ -0.65
TOPBP1-203ENST00000503464 UGGT2Q9NYU1 1516 aa10.99□□□□□ -0.65
TOPBP1-203ENST00000503464 FHOD3Q2V2M9 1422 aa10.96□□□□□ -0.65
TOPBP1-203ENST00000503464 CHMP7Q8WUX9 453 aaPredicted RBP10.96□□□□□ -0.65
TOPBP1-203ENST00000503464 KIAA0556O60303 1618 aa10.95□□□□□ -0.66
TOPBP1-203ENST00000503464 PCF11O94913 1555 aaKnown RBP10.95□□□□□ -0.66
TOPBP1-203ENST00000503464 DISP1Q96F81 1524 aa10.94□□□□□ -0.66
TOPBP1-203ENST00000503464 LRRIQ1Q96JM4 1722 aa10.93□□□□□ -0.66
TOPBP1-203ENST00000503464 SHROOM2Q13796 1616 aa10.93□□□□□ -0.66
TOPBP1-203ENST00000503464 CLASP1Q7Z460 1538 aa10.93□□□□□ -0.66
TOPBP1-203ENST00000503464 FBLN2P98095 1184 aa10.92□□□□□ -0.66
TOPBP1-203ENST00000503464 CFAP43Q8NDM7 1665 aa10.9□□□□□ -0.66
TOPBP1-203ENST00000503464 P3H3Q8IVL6 736 aa10.9□□□□□ -0.66
TOPBP1-203ENST00000503464 FYCO1Q9BQS8 1478 aa10.87□□□□□ -0.67
TOPBP1-203ENST00000503464 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
TOPBP1-203ENST00000503464 ERCC6L2Q5T890 1561 aa10.86□□□□□ -0.67
TOPBP1-203ENST00000503464 CASKIN1Q8WXD9 1431 aa10.86□□□□□ -0.67
TOPBP1-203ENST00000503464 PPARGC1BQ86YN6 1023 aaKnown RBP10.86□□□□□ -0.67
TOPBP1-203ENST00000503464 FMN1Q68DA7 1419 aa10.85□□□□□ -0.67
TOPBP1-203ENST00000503464 DMRT2Q9Y5R5 561 aa10.85□□□□□ -0.67
TOPBP1-203ENST00000503464 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
TOPBP1-203ENST00000503464 JPH4Q96JJ6 628 aa10.83□□□□□ -0.68
TOPBP1-203ENST00000503464 HECW1Q76N89 1606 aa10.82□□□□□ -0.68
TOPBP1-203ENST00000503464 RAPGEF6Q8TEU7 1601 aa10.82□□□□□ -0.68
TOPBP1-203ENST00000503464 PRG4Q92954 1404 aaPredicted RBP10.82□□□□□ -0.68
TOPBP1-203ENST00000503464 KANK4Q5T7N3 995 aaPredicted RBP10.8□□□□□ -0.68
TOPBP1-203ENST00000503464 CARMIL2Q6F5E8 1435 aa10.8□□□□□ -0.68
TOPBP1-203ENST00000503464 ABCA8O94911 1581 aa10.79□□□□□ -0.68
TOPBP1-203ENST00000503464 NUP153P49790 1475 aaKnown RBP10.79□□□□□ -0.68
TOPBP1-203ENST00000503464 MAGI3Q5TCQ9 1506 aa10.79□□□□□ -0.68
TOPBP1-203ENST00000503464 PLB1Q6P1J6 1458 aa10.78□□□□□ -0.68
TOPBP1-203ENST00000503464 LRRC9Q6ZRR7 1453 aa10.78□□□□□ -0.68
TOPBP1-203ENST00000503464 EPRSP07814 1512 aaKnown RBP10.77□□□□□ -0.69
TOPBP1-203ENST00000503464 CDK13Q14004 1512 aaKnown RBP10.77□□□□□ -0.69
TOPBP1-203ENST00000503464 TTBK1Q5TCY1 1321 aaPredicted RBP10.77□□□□□ -0.69
TOPBP1-203ENST00000503464 CCDC18Q5T9S5 1454 aa10.75□□□□□ -0.69
TOPBP1-203ENST00000503464 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
TOPBP1-203ENST00000503464 APLP2Q06481 763 aa10.73□□□□□ -0.69
TOPBP1-203ENST00000503464 PCGF6Q9BYE7 350 aa10.73□□□□□ -0.69
TOPBP1-203ENST00000503464 EHBP1L1Q8N3D4 1523 aa10.72□□□□□ -0.69
TOPBP1-203ENST00000503464 ARHGEF11O15085 1522 aa10.71□□□□□ -0.69
TOPBP1-203ENST00000503464 PTPRGP23470 1445 aa10.71□□□□□ -0.69
TOPBP1-203ENST00000503464 MAPK8IP2Q13387 824 aaPredicted RBP10.71□□□□□ -0.69
TOPBP1-203ENST00000503464 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.69
TOPBP1-203ENST00000503464 OSCARQ8IYS5 282 aa10.7□□□□□ -0.7
TOPBP1-203ENST00000503464 SUPT6HQ7KZ85 1726 aaKnown RBP10.7□□□□□ -0.7
TOPBP1-203ENST00000503464 ABCC2Q92887 1545 aa10.69□□□□□ -0.7
TOPBP1-203ENST00000503464 PHLDB1Q86UU1 1377 aa10.69□□□□□ -0.7
TOPBP1-203ENST00000503464 UACAQ9BZF9 1416 aa10.68□□□□□ -0.7
TOPBP1-203ENST00000503464 ADCY10Q96PN6 1610 aa10.68□□□□□ -0.7
TOPBP1-203ENST00000503464 ATP10BO94823 1461 aa10.68□□□□□ -0.7
TOPBP1-203ENST00000503464 RRBP1Q9P2E9 1410 aaKnown RBP10.67□□□□□ -0.7
TOPBP1-203ENST00000503464 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
TOPBP1-203ENST00000503464 NCOA2Q15596 1464 aa10.67□□□□□ -0.7
TOPBP1-203ENST00000503464 KIF14Q15058 1648 aa10.66□□□□□ -0.7
TOPBP1-203ENST00000503464 UHRF1BP1LA0JNW5 1464 aa10.66□□□□□ -0.7
TOPBP1-203ENST00000503464 ZCCHC11Q5TAX3 1644 aaKnown RBP10.66□□□□□ -0.7
TOPBP1-203ENST00000503464 MTUS2Q5JR59 1369 aa10.65□□□□□ -0.7
TOPBP1-203ENST00000503464 TROQ12816 1431 aaPredicted RBP10.63□□□□□ -0.71
TOPBP1-203ENST00000503464 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
TOPBP1-203ENST00000503464 RIMBP3CA6NJZ7 1639 aa10.62□□□□□ -0.71
TOPBP1-203ENST00000503464 RIMBP3BA6NNM3 1639 aa10.62□□□□□ -0.71
TOPBP1-203ENST00000503464 RIMBP3Q9UFD9 1639 aa10.62□□□□□ -0.71
TOPBP1-203ENST00000503464 CCNB3Q8WWL7 1395 aa10.61□□□□□ -0.71
TOPBP1-203ENST00000503464 CDC42BPAQ5VT25 1732 aa10.61□□□□□ -0.71
TOPBP1-203ENST00000503464 MYOM3Q5VTT5 1437 aa10.6□□□□□ -0.71
TOPBP1-203ENST00000503464 FGD6Q6ZV73 1430 aa10.6□□□□□ -0.71
TOPBP1-203ENST00000503464 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
TOPBP1-203ENST00000503464 ABCC10Q5T3U5 1492 aa10.59□□□□□ -0.71
TOPBP1-203ENST00000503464 PTPN23Q9H3S7 1636 aa10.58□□□□□ -0.72
TOPBP1-203ENST00000503464 ITSN2Q9NZM3 1697 aa10.58□□□□□ -0.72
TOPBP1-203ENST00000503464 TTC37Q6PGP7 1564 aa10.57□□□□□ -0.72
TOPBP1-203ENST00000503464 TCOF1Q13428 1488 aaKnown RBP10.57□□□□□ -0.72
TOPBP1-203ENST00000503464 GPATCH8Q9UKJ3 1502 aaKnown RBP10.55□□□□□ -0.72
TOPBP1-203ENST00000503464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.55□□□□□ -0.72
TOPBP1-203ENST00000503464 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
TOPBP1-203ENST00000503464 RNF39Q9H2S5 420 aa10.55□□□□□ -0.72
TOPBP1-203ENST00000503464 CDC42BPBQ9Y5S2 1711 aa10.55□□□□□ -0.72
TOPBP1-203ENST00000503464 PREX2Q70Z35 1606 aa10.55□□□□□ -0.72
TOPBP1-203ENST00000503464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms