RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CTTNBP2Q8WZ74 1663 aa34.2■■■■□ 3.06
PTPN13-205ENST00000502971 FHAD1B1AJZ9 1412 aa34.19■■■■□ 3.06
PTPN13-205ENST00000502971 SNAPC4Q5SXM2 1469 aa34.16■■■■□ 3.06
PTPN13-205ENST00000502971 ADAMTS12P58397 1594 aa34.15■■■■□ 3.06
PTPN13-205ENST00000502971 APLP2Q06481 763 aa34.08■■■■□ 3.05
PTPN13-205ENST00000502971 SYNJ2O15056 1496 aa34.05■■■■□ 3.04
PTPN13-205ENST00000502971 EFCAB5A4FU69 1503 aa34.03■■■■□ 3.04
PTPN13-205ENST00000502971 CHMP7Q8WUX9 453 aaPredicted RBP33.98■■■■□ 3.03
PTPN13-205ENST00000502971 GRIN2AQ12879 1464 aa33.95■■■■□ 3.02
PTPN13-205ENST00000502971 TTBK1Q5TCY1 1321 aaPredicted RBP33.9■■■■□ 3.02
PTPN13-205ENST00000502971 FBLN2P98095 1184 aa33.87■■■■□ 3.01
PTPN13-205ENST00000502971 SAMD9Q5K651 1589 aa33.84■■■■□ 3.01
PTPN13-205ENST00000502971 HRCP23327 699 aa33.82■■■■□ 3
PTPN13-205ENST00000502971 FHOD3Q2V2M9 1422 aa33.81■■■■□ 3
PTPN13-205ENST00000502971 P3H3Q8IVL6 736 aa33.79■■■■□ 3
PTPN13-205ENST00000502971 MAP3K1Q13233 1512 aa33.78■■■■□ 3
PTPN13-205ENST00000502971 IQGAP2Q13576 1575 aa33.78■■■■□ 3
PTPN13-205ENST00000502971 NUP160Q12769 1436 aa33.76■■■■□ 3
PTPN13-205ENST00000502971 CHD1O14646 1710 aa33.75■■■□□ 2.99
PTPN13-205ENST00000502971 FMN1Q68DA7 1419 aa33.73■■■□□ 2.99
PTPN13-205ENST00000502971 KIAA0586Q9BVV6 1533 aa33.72■■■□□ 2.99
PTPN13-205ENST00000502971 PCF11O94913 1555 aaKnown RBP33.69■■■□□ 2.98
PTPN13-205ENST00000502971 CEP170Q5SW79 1584 aa33.69■■■□□ 2.98
PTPN13-205ENST00000502971 FYCO1Q9BQS8 1478 aa33.68■■■□□ 2.98
PTPN13-205ENST00000502971 CASKIN1Q8WXD9 1431 aa33.68■■■□□ 2.98
PTPN13-205ENST00000502971 TIAM1Q13009 1591 aa33.67■■■□□ 2.98
PTPN13-205ENST00000502971 KANK4Q5T7N3 995 aaPredicted RBP33.67■■■□□ 2.98
PTPN13-205ENST00000502971 UGGT2Q9NYU1 1516 aa33.65■■■□□ 2.98
PTPN13-205ENST00000502971 CFAP43Q8NDM7 1665 aa33.58■■■□□ 2.97
PTPN13-205ENST00000502971 LRRC9Q6ZRR7 1453 aa33.52■■■□□ 2.96
PTPN13-205ENST00000502971 OSCARQ8IYS5 282 aa33.48■■■□□ 2.95
PTPN13-205ENST00000502971 ATP1B4Q9UN42 357 aaPredicted RBP33.48■■■□□ 2.95
PTPN13-205ENST00000502971 JPH4Q96JJ6 628 aa33.46■■■□□ 2.95
PTPN13-205ENST00000502971 CLASP1Q7Z460 1538 aa33.44■■■□□ 2.94
PTPN13-205ENST00000502971 KIAA0556O60303 1618 aa33.43■■■□□ 2.94
PTPN13-205ENST00000502971 DISP1Q96F81 1524 aa33.43■■■□□ 2.94
PTPN13-205ENST00000502971 RRBP1Q9P2E9 1410 aaKnown RBP33.42■■■□□ 2.94
PTPN13-205ENST00000502971 ZEB1P37275 1124 aaPredicted RBP33.37■■■□□ 2.93
PTPN13-205ENST00000502971 SHROOM2Q13796 1616 aa33.35■■■□□ 2.93
PTPN13-205ENST00000502971 CARMIL2Q6F5E8 1435 aa33.34■■■□□ 2.93
PTPN13-205ENST00000502971 DNAJC5Q9H3Z4 198 aa33.33■■■□□ 2.93
PTPN13-205ENST00000502971 HECW1Q76N89 1606 aa33.33■■■□□ 2.93
PTPN13-205ENST00000502971 LRRIQ1Q96JM4 1722 aa33.31■■■□□ 2.92
PTPN13-205ENST00000502971 CCDC18Q5T9S5 1454 aa33.31■■■□□ 2.92
PTPN13-205ENST00000502971 CCNB3Q8WWL7 1395 aa33.28■■■□□ 2.92
PTPN13-205ENST00000502971 HNRNPUL2Q1KMD3 747 aaKnown RBP33.27■■■□□ 2.92
PTPN13-205ENST00000502971 PRG4Q92954 1404 aaPredicted RBP33.26■■■□□ 2.92
PTPN13-205ENST00000502971 MTUS2Q5JR59 1369 aa33.22■■■□□ 2.91
PTPN13-205ENST00000502971 PHLDB1Q86UU1 1377 aa33.21■■■□□ 2.91
PTPN13-205ENST00000502971 EPRSP07814 1512 aaKnown RBP33.2■■■□□ 2.9
PTPN13-205ENST00000502971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.19■■■□□ 2.9
PTPN13-205ENST00000502971 EHBP1L1Q8N3D4 1523 aa33.18■■■□□ 2.9
PTPN13-205ENST00000502971 CCER1Q8TC90 406 aaPredicted RBP33.15■■■□□ 2.9
PTPN13-205ENST00000502971 RAPGEF6Q8TEU7 1601 aa33.14■■■□□ 2.9
PTPN13-205ENST00000502971 SUPT6HQ7KZ85 1726 aaKnown RBP33.09■■■□□ 2.89
PTPN13-205ENST00000502971 NUP153P49790 1475 aaKnown RBP33.06■■■□□ 2.88
PTPN13-205ENST00000502971 CDK13Q14004 1512 aaKnown RBP33.05■■■□□ 2.88
PTPN13-205ENST00000502971 MAGI3Q5TCQ9 1506 aa33.05■■■□□ 2.88
PTPN13-205ENST00000502971 NCOA2Q15596 1464 aa33.04■■■□□ 2.88
PTPN13-205ENST00000502971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.04■■■□□ 2.88
PTPN13-205ENST00000502971 ERCC6L2Q5T890 1561 aa33.03■■■□□ 2.88
PTPN13-205ENST00000502971 PTPRGP23470 1445 aa33.03■■■□□ 2.88
PTPN13-205ENST00000502971 ARHGEF11O15085 1522 aa33.01■■■□□ 2.87
PTPN13-205ENST00000502971 PLB1Q6P1J6 1458 aa32.98■■■□□ 2.87
PTPN13-205ENST00000502971 FGD6Q6ZV73 1430 aa32.97■■■□□ 2.87
PTPN13-205ENST00000502971 MYOM3Q5VTT5 1437 aa32.95■■■□□ 2.87
PTPN13-205ENST00000502971 ABCA8O94911 1581 aa32.94■■■□□ 2.86
PTPN13-205ENST00000502971 FAM50AQ14320 339 aaKnown RBP32.93■■■□□ 2.86
PTPN13-205ENST00000502971 CDK11AQ9UQ88 783 aaPredicted RBP32.93■■■□□ 2.86
PTPN13-205ENST00000502971 ARID3CA6NKF2 412 aa32.89■■■□□ 2.86
PTPN13-205ENST00000502971 ITGAEP38570 1179 aa32.87■■■□□ 2.85
PTPN13-205ENST00000502971 UACAQ9BZF9 1416 aa32.83■■■□□ 2.85
PTPN13-205ENST00000502971 TROQ12816 1431 aaPredicted RBP32.8■■■□□ 2.84
PTPN13-205ENST00000502971 MIA2Q96PC5 1412 aa32.78■■■□□ 2.84
PTPN13-205ENST00000502971 PTPN23Q9H3S7 1636 aa32.77■■■□□ 2.84
PTPN13-205ENST00000502971 TCOF1Q13428 1488 aaKnown RBP32.76■■■□□ 2.84
PTPN13-205ENST00000502971 UHRF1BP1LA0JNW5 1464 aa32.76■■■□□ 2.83
PTPN13-205ENST00000502971 ABCC2Q92887 1545 aa32.74■■■□□ 2.83
PTPN13-205ENST00000502971 ATP10BO94823 1461 aa32.74■■■□□ 2.83
PTPN13-205ENST00000502971 SETD5Q9C0A6 1442 aa32.72■■■□□ 2.83
PTPN13-205ENST00000502971 RIMBP3CA6NJZ7 1639 aa32.72■■■□□ 2.83
PTPN13-205ENST00000502971 RIMBP3BA6NNM3 1639 aa32.72■■■□□ 2.83
PTPN13-205ENST00000502971 RIMBP3Q9UFD9 1639 aa32.72■■■□□ 2.83
PTPN13-205ENST00000502971 ADCY10Q96PN6 1610 aa32.71■■■□□ 2.83
PTPN13-205ENST00000502971 CLSPNQ9HAW4 1339 aa32.67■■■□□ 2.82
PTPN13-205ENST00000502971 DHX57Q6P158 1386 aaKnown RBP32.67■■■□□ 2.82
PTPN13-205ENST00000502971 RAB3GAP2Q9H2M9 1393 aa32.67■■■□□ 2.82
PTPN13-205ENST00000502971 PLEKHD1A6NEE1 506 aa32.65■■■□□ 2.82
PTPN13-205ENST00000502971 KDM5BQ9UGL1 1544 aa32.59■■■□□ 2.81
PTPN13-205ENST00000502971 PTPRKQ15262 1439 aa32.58■■■□□ 2.81
PTPN13-205ENST00000502971 KIF14Q15058 1648 aa32.57■■■□□ 2.8
PTPN13-205ENST00000502971 ITSN2Q9NZM3 1697 aa32.56■■■□□ 2.8
PTPN13-205ENST00000502971 CYB5RLQ6IPT4 315 aa32.54■■■□□ 2.8
PTPN13-205ENST00000502971 HFM1A2PYH4 1435 aa32.53■■■□□ 2.8
PTPN13-205ENST00000502971 GPATCH8Q9UKJ3 1502 aaKnown RBP32.52■■■□□ 2.8
PTPN13-205ENST00000502971 ABCC10Q5T3U5 1492 aa32.49■■■□□ 2.79
PTPN13-205ENST00000502971 ZCCHC11Q5TAX3 1644 aaKnown RBP32.46■■■□□ 2.79
PTPN13-205ENST00000502971 NPM1P06748 294 aaKnown RBP eCLIP32.46■■■□□ 2.79
PTPN13-205ENST00000502971 CFDP1Q9UEE9 299 aaPredicted RBP32.45■■■□□ 2.78
PTPN13-205ENST00000502971 AKNAQ7Z591 1439 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms