RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MSH5O43196 834 aa14.72□□□□□ -0.05
HMGXB4-207ENST00000498212 CUL7Q14999 1698 aa14.71□□□□□ -0.05
HMGXB4-207ENST00000498212 KIF27Q86VH2 1401 aa14.7□□□□□ -0.06
HMGXB4-207ENST00000498212 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
HMGXB4-207ENST00000498212 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
HMGXB4-207ENST00000498212 IGF1RP08069 1367 aa14.64□□□□□ -0.07
HMGXB4-207ENST00000498212 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
HMGXB4-207ENST00000498212 PRG4Q92954 1404 aaPredicted RBP14.59□□□□□ -0.07
HMGXB4-207ENST00000498212 PIAS4Q8N2W9 510 aaPredicted RBP14.59□□□□□ -0.07
HMGXB4-207ENST00000498212 JPH4Q96JJ6 628 aa14.59□□□□□ -0.07
HMGXB4-207ENST00000498212 CARMIL1Q5VZK9 1371 aa14.57□□□□□ -0.08
HMGXB4-207ENST00000498212 KIAA0586Q9BVV6 1533 aa14.56□□□□□ -0.08
HMGXB4-207ENST00000498212 PLPPR3Q6T4P5 718 aa14.52□□□□□ -0.09
HMGXB4-207ENST00000498212 PPP6R1Q9UPN7 881 aa14.5□□□□□ -0.09
HMGXB4-207ENST00000498212 IQGAP2Q13576 1575 aa14.5□□□□□ -0.09
HMGXB4-207ENST00000498212 RAPGEF2Q9Y4G8 1499 aa14.48□□□□□ -0.09
HMGXB4-207ENST00000498212 KIF13AQ9H1H9 1805 aa14.46□□□□□ -0.09
HMGXB4-207ENST00000498212 ADCY10Q96PN6 1610 aa14.46□□□□□ -0.09
HMGXB4-207ENST00000498212 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.1
HMGXB4-207ENST00000498212 CARMIL2Q6F5E8 1435 aa14.42□□□□□ -0.1
HMGXB4-207ENST00000498212 ADRA2BP18089 450 aa14.42□□□□□ -0.1
HMGXB4-207ENST00000498212 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
HMGXB4-207ENST00000498212 MAPKBP1O60336 1514 aa14.39□□□□□ -0.11
HMGXB4-207ENST00000498212 TNIKQ9UKE5 1360 aa14.38□□□□□ -0.11
HMGXB4-207ENST00000498212 DISP1Q96F81 1524 aa14.38□□□□□ -0.11
HMGXB4-207ENST00000498212 UGGT2Q9NYU1 1516 aa14.38□□□□□ -0.11
HMGXB4-207ENST00000498212 PTPRGP23470 1445 aa14.38□□□□□ -0.11
HMGXB4-207ENST00000498212 KIAA0556O60303 1618 aa14.37□□□□□ -0.11
HMGXB4-207ENST00000498212 PRXQ9BXM0 1461 aa14.36□□□□□ -0.11
HMGXB4-207ENST00000498212 TTBK1Q5TCY1 1321 aaPredicted RBP14.35□□□□□ -0.11
HMGXB4-207ENST00000498212 DIP2BQ9P265 1576 aa14.34□□□□□ -0.11
HMGXB4-207ENST00000498212 ABCC10Q5T3U5 1492 aa14.33□□□□□ -0.12
HMGXB4-207ENST00000498212 ABCC2Q92887 1545 aa14.31□□□□□ -0.12
HMGXB4-207ENST00000498212 TSPOAP1O95153 1857 aa14.3□□□□□ -0.12
HMGXB4-207ENST00000498212 UACAQ9BZF9 1416 aa14.3□□□□□ -0.12
HMGXB4-207ENST00000498212 UHRF1BP1LA0JNW5 1464 aa14.3□□□□□ -0.12
HMGXB4-207ENST00000498212 FAM69CQ0P6D2 419 aa14.29□□□□□ -0.12
HMGXB4-207ENST00000498212 GOLGA3Q08378 1498 aa14.28□□□□□ -0.12
HMGXB4-207ENST00000498212 EEA1Q15075 1411 aa14.28□□□□□ -0.12
HMGXB4-207ENST00000498212 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
HMGXB4-207ENST00000498212 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
HMGXB4-207ENST00000498212 KDM5BQ9UGL1 1544 aa14.24□□□□□ -0.13
HMGXB4-207ENST00000498212 ASXL2Q76L83 1435 aa14.24□□□□□ -0.13
HMGXB4-207ENST00000498212 PLB1Q6P1J6 1458 aa14.23□□□□□ -0.13
HMGXB4-207ENST00000498212 GLI2P10070 1586 aa14.21□□□□□ -0.14
HMGXB4-207ENST00000498212 ABCA8O94911 1581 aa14.2□□□□□ -0.14
HMGXB4-207ENST00000498212 KIF21BO75037 1637 aa14.19□□□□□ -0.14
HMGXB4-207ENST00000498212 SAMD9Q5K651 1589 aa14.19□□□□□ -0.14
HMGXB4-207ENST00000498212 PPRC1Q5VV67 1664 aaKnown RBP14.19□□□□□ -0.14
HMGXB4-207ENST00000498212 KDM6BO15054 1643 aa14.19□□□□□ -0.14
HMGXB4-207ENST00000498212 FAM9AQ8IZU1 332 aaPredicted RBP14.17□□□□□ -0.14
HMGXB4-207ENST00000498212 MAP3K4Q9Y6R4 1608 aa14.16□□□□□ -0.14
HMGXB4-207ENST00000498212 EPRSP07814 1512 aaKnown RBP14.15□□□□□ -0.14
HMGXB4-207ENST00000498212 WDR7Q9Y4E6 1490 aa14.13□□□□□ -0.15
HMGXB4-207ENST00000498212 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
HMGXB4-207ENST00000498212 RAPGEF6Q8TEU7 1601 aa14.12□□□□□ -0.15
HMGXB4-207ENST00000498212 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
HMGXB4-207ENST00000498212 RANGAP1P46060 587 aaPredicted RBP14.08□□□□□ -0.16
HMGXB4-207ENST00000498212 TEX14Q8IWB6 1497 aa14.07□□□□□ -0.16
HMGXB4-207ENST00000498212 EFCAB5A4FU69 1503 aa14.07□□□□□ -0.16
HMGXB4-207ENST00000498212 FHOD3Q2V2M9 1422 aa14.06□□□□□ -0.16
HMGXB4-207ENST00000498212 ATP10BO94823 1461 aa14.06□□□□□ -0.16
HMGXB4-207ENST00000498212 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
HMGXB4-207ENST00000498212 KCNH8Q96L42 1107 aa14.03□□□□□ -0.16
HMGXB4-207ENST00000498212 CD109Q6YHK3 1445 aa14.02□□□□□ -0.16
HMGXB4-207ENST00000498212 EHMT2Q96KQ7 1210 aa14.02□□□□□ -0.17
HMGXB4-207ENST00000498212 MAGI3Q5TCQ9 1506 aa14.01□□□□□ -0.17
HMGXB4-207ENST00000498212 NUP153P49790 1475 aaKnown RBP14.01□□□□□ -0.17
HMGXB4-207ENST00000498212 UBTFP17480 764 aaKnown RBP14.01□□□□□ -0.17
HMGXB4-207ENST00000498212 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
HMGXB4-207ENST00000498212 COL17A1Q9UMD9 1497 aaPredicted RBP13.99□□□□□ -0.17
HMGXB4-207ENST00000498212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
HMGXB4-207ENST00000498212 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
HMGXB4-207ENST00000498212 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
HMGXB4-207ENST00000498212 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
HMGXB4-207ENST00000498212 FMN1Q68DA7 1419 aa13.92□□□□□ -0.18
HMGXB4-207ENST00000498212 CDK13Q14004 1512 aaKnown RBP13.9□□□□□ -0.18
HMGXB4-207ENST00000498212 PLEKHD1A6NEE1 506 aa13.9□□□□□ -0.18
HMGXB4-207ENST00000498212 LRRIQ1Q96JM4 1722 aa13.9□□□□□ -0.18
HMGXB4-207ENST00000498212 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.19
HMGXB4-207ENST00000498212 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
HMGXB4-207ENST00000498212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.88□□□□□ -0.19
HMGXB4-207ENST00000498212 NEO1Q92859 1461 aa13.87□□□□□ -0.19
HMGXB4-207ENST00000498212 PHLDB1Q86UU1 1377 aa13.87□□□□□ -0.19
HMGXB4-207ENST00000498212 TTC37Q6PGP7 1564 aa13.87□□□□□ -0.19
HMGXB4-207ENST00000498212 CFAP74Q9C0B2 1584 aa13.87□□□□□ -0.19
HMGXB4-207ENST00000498212 ADGRL1O94910 1474 aa13.86□□□□□ -0.19
HMGXB4-207ENST00000498212 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
HMGXB4-207ENST00000498212 MYO5CQ9NQX4 1742 aa13.84□□□□□ -0.19
HMGXB4-207ENST00000498212 PCF11O94913 1555 aaKnown RBP13.83□□□□□ -0.2
HMGXB4-207ENST00000498212 FRMPD1Q5SYB0 1578 aa13.83□□□□□ -0.2
HMGXB4-207ENST00000498212 RICTORQ6R327 1708 aa13.82□□□□□ -0.2
HMGXB4-207ENST00000498212 FANCAO15360 1455 aa13.81□□□□□ -0.2
HMGXB4-207ENST00000498212 KIF14Q15058 1648 aa13.81□□□□□ -0.2
HMGXB4-207ENST00000498212 CDK11AQ9UQ88 783 aaPredicted RBP13.8□□□□□ -0.2
HMGXB4-207ENST00000498212 AKNAQ7Z591 1439 aa13.79□□□□□ -0.2
HMGXB4-207ENST00000498212 RAPGEF3O95398 923 aa13.78□□□□□ -0.2
HMGXB4-207ENST00000498212 CLIP1P30622 1438 aa13.78□□□□□ -0.2
HMGXB4-207ENST00000498212 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
HMGXB4-207ENST00000498212 DENND4BO75064 1496 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms