RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
HLA-B-254ENST00000497377 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
HLA-B-254ENST00000497377 CUL7Q14999 1698 aa19.45■□□□□ 0.7
HLA-B-254ENST00000497377 IGF1RP08069 1367 aa19.44■□□□□ 0.7
HLA-B-254ENST00000497377 DCAF8L1A6NGE4 600 aa19.43■□□□□ 0.7
HLA-B-254ENST00000497377 NUP160Q12769 1436 aa19.41■□□□□ 0.7
HLA-B-254ENST00000497377 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
HLA-B-254ENST00000497377 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
HLA-B-254ENST00000497377 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
HLA-B-254ENST00000497377 HOXD11P31277 338 aaPredicted RBP19.4■□□□□ 0.7
HLA-B-254ENST00000497377 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
HLA-B-254ENST00000497377 CEP170Q5SW79 1584 aa19.37■□□□□ 0.69
HLA-B-254ENST00000497377 CARMIL1Q5VZK9 1371 aa19.34■□□□□ 0.69
HLA-B-254ENST00000497377 RNF216Q9NWF9 866 aaPredicted RBP19.31■□□□□ 0.68
HLA-B-254ENST00000497377 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
HLA-B-254ENST00000497377 SHROOM2Q13796 1616 aa19.26■□□□□ 0.67
HLA-B-254ENST00000497377 RAPGEF2Q9Y4G8 1499 aa19.24■□□□□ 0.67
HLA-B-254ENST00000497377 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
HLA-B-254ENST00000497377 KIAA0586Q9BVV6 1533 aa19.24■□□□□ 0.67
HLA-B-254ENST00000497377 EEA1Q15075 1411 aa19.24■□□□□ 0.67
HLA-B-254ENST00000497377 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
HLA-B-254ENST00000497377 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
HLA-B-254ENST00000497377 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
HLA-B-254ENST00000497377 PRXQ9BXM0 1461 aa19.17■□□□□ 0.66
HLA-B-254ENST00000497377 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
HLA-B-254ENST00000497377 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
HLA-B-254ENST00000497377 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
HLA-B-254ENST00000497377 IQGAP2Q13576 1575 aa19.13■□□□□ 0.65
HLA-B-254ENST00000497377 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.64
HLA-B-254ENST00000497377 CARMIL2Q6F5E8 1435 aa19.05■□□□□ 0.64
HLA-B-254ENST00000497377 UGGT2Q9NYU1 1516 aa19.03■□□□□ 0.64
HLA-B-254ENST00000497377 FAM9AQ8IZU1 332 aaPredicted RBP19.01■□□□□ 0.63
HLA-B-254ENST00000497377 KIF21BO75037 1637 aa19■□□□□ 0.63
HLA-B-254ENST00000497377 CACNB1Q02641 598 aaPredicted RBP18.99■□□□□ 0.63
HLA-B-254ENST00000497377 TNIKQ9UKE5 1360 aa18.96■□□□□ 0.63
HLA-B-254ENST00000497377 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
HLA-B-254ENST00000497377 GOLGA3Q08378 1498 aa18.95■□□□□ 0.62
HLA-B-254ENST00000497377 PTPRGP23470 1445 aa18.94■□□□□ 0.62
HLA-B-254ENST00000497377 KIAA0556O60303 1618 aa18.92■□□□□ 0.62
HLA-B-254ENST00000497377 NPM3O75607 178 aaKnown RBP18.88■□□□□ 0.61
HLA-B-254ENST00000497377 ADCY10Q96PN6 1610 aa18.86■□□□□ 0.61
HLA-B-254ENST00000497377 RNF39Q9H2S5 420 aa18.85■□□□□ 0.61
HLA-B-254ENST00000497377 NPM1P06748 294 aaKnown RBP eCLIP18.84■□□□□ 0.61
HLA-B-254ENST00000497377 UHRF1BP1LA0JNW5 1464 aa18.83■□□□□ 0.6
HLA-B-254ENST00000497377 UACAQ9BZF9 1416 aa18.82■□□□□ 0.6
HLA-B-254ENST00000497377 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
HLA-B-254ENST00000497377 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
HLA-B-254ENST00000497377 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
HLA-B-254ENST00000497377 UBTFP17480 764 aaKnown RBP18.8■□□□□ 0.6
HLA-B-254ENST00000497377 MAPKBP1O60336 1514 aa18.79■□□□□ 0.6
HLA-B-254ENST00000497377 ABCC2Q92887 1545 aa18.79■□□□□ 0.6
HLA-B-254ENST00000497377 EFCAB5A4FU69 1503 aa18.76■□□□□ 0.59
HLA-B-254ENST00000497377 ABCA8O94911 1581 aa18.73■□□□□ 0.59
HLA-B-254ENST00000497377 PLB1Q6P1J6 1458 aa18.72■□□□□ 0.59
HLA-B-254ENST00000497377 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
HLA-B-254ENST00000497377 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
HLA-B-254ENST00000497377 KDM5BQ9UGL1 1544 aa18.72■□□□□ 0.59
HLA-B-254ENST00000497377 RANGAP1P46060 587 aaPredicted RBP18.69■□□□□ 0.58
HLA-B-254ENST00000497377 ABCC10Q5T3U5 1492 aa18.68■□□□□ 0.58
HLA-B-254ENST00000497377 ZCCHC11Q5TAX3 1644 aaKnown RBP18.67■□□□□ 0.58
HLA-B-254ENST00000497377 KIF13AQ9H1H9 1805 aa18.66■□□□□ 0.58
HLA-B-254ENST00000497377 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
HLA-B-254ENST00000497377 ASXL2Q76L83 1435 aa18.64■□□□□ 0.57
HLA-B-254ENST00000497377 DIP2BQ9P265 1576 aa18.64■□□□□ 0.57
HLA-B-254ENST00000497377 RAPGEF6Q8TEU7 1601 aa18.63■□□□□ 0.57
HLA-B-254ENST00000497377 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
HLA-B-254ENST00000497377 ARHGAP35Q9NRY4 1499 aa18.62■□□□□ 0.57
HLA-B-254ENST00000497377 FAM69CQ0P6D2 419 aa18.61■□□□□ 0.57
HLA-B-254ENST00000497377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.6■□□□□ 0.57
HLA-B-254ENST00000497377 KCNA4P22459 653 aa18.59■□□□□ 0.57
HLA-B-254ENST00000497377 FMN1Q68DA7 1419 aa18.58■□□□□ 0.57
HLA-B-254ENST00000497377 GLI2P10070 1586 aa18.57■□□□□ 0.56
HLA-B-254ENST00000497377 WDR7Q9Y4E6 1490 aa18.57■□□□□ 0.56
HLA-B-254ENST00000497377 ATP10BO94823 1461 aa18.56■□□□□ 0.56
HLA-B-254ENST00000497377 NUP153P49790 1475 aaKnown RBP18.55■□□□□ 0.56
HLA-B-254ENST00000497377 EPRSP07814 1512 aaKnown RBP18.54■□□□□ 0.56
HLA-B-254ENST00000497377 CLIP1P30622 1438 aa18.52■□□□□ 0.56
HLA-B-254ENST00000497377 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
HLA-B-254ENST00000497377 ARID3CA6NKF2 412 aa18.48■□□□□ 0.55
HLA-B-254ENST00000497377 MAP3K4Q9Y6R4 1608 aa18.47■□□□□ 0.55
HLA-B-254ENST00000497377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
HLA-B-254ENST00000497377 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
HLA-B-254ENST00000497377 TSPOAP1O95153 1857 aa18.46■□□□□ 0.54
HLA-B-254ENST00000497377 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
HLA-B-254ENST00000497377 CEP162Q5TB80 1403 aa18.43■□□□□ 0.54
HLA-B-254ENST00000497377 KCNH8Q96L42 1107 aa18.43■□□□□ 0.54
HLA-B-254ENST00000497377 CASKIN1Q8WXD9 1431 aa18.42■□□□□ 0.54
HLA-B-254ENST00000497377 PLEKHD1A6NEE1 506 aa18.42■□□□□ 0.54
HLA-B-254ENST00000497377 TEX14Q8IWB6 1497 aa18.41■□□□□ 0.54
HLA-B-254ENST00000497377 LOC105371045A0A1W2PR82 267 aa18.41■□□□□ 0.54
HLA-B-254ENST00000497377 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
HLA-B-254ENST00000497377 PPRC1Q5VV67 1664 aaKnown RBP18.41■□□□□ 0.54
HLA-B-254ENST00000497377 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.54
HLA-B-254ENST00000497377 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.54
HLA-B-254ENST00000497377 PCF11O94913 1555 aaKnown RBP18.39■□□□□ 0.53
HLA-B-254ENST00000497377 CD109Q6YHK3 1445 aa18.39■□□□□ 0.53
HLA-B-254ENST00000497377 ABCA9Q8IUA7 1624 aa18.38■□□□□ 0.53
HLA-B-254ENST00000497377 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
HLA-B-254ENST00000497377 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
HLA-B-254ENST00000497377 MAGI3Q5TCQ9 1506 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms