RNA–Protein interactions for RNA: ENST00000496827.1

SEC24C-205, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 3

Gene SEC24C, Length 948 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-205ENST00000496827 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
SEC24C-205ENST00000496827 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
SEC24C-205ENST00000496827 KIAA0586Q9BVV6 1533 aa20.41■□□□□ 0.86
SEC24C-205ENST00000496827 CYB5RLQ6IPT4 315 aa20.4■□□□□ 0.86
SEC24C-205ENST00000496827 PRXQ9BXM0 1461 aa20.38■□□□□ 0.85
SEC24C-205ENST00000496827 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
SEC24C-205ENST00000496827 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
SEC24C-205ENST00000496827 PRG4Q92954 1404 aaPredicted RBP20.35■□□□□ 0.85
SEC24C-205ENST00000496827 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.84
SEC24C-205ENST00000496827 IQGAP2Q13576 1575 aa20.29■□□□□ 0.84
SEC24C-205ENST00000496827 CARMIL2Q6F5E8 1435 aa20.21■□□□□ 0.83
SEC24C-205ENST00000496827 CTTNBP2Q8WZ74 1663 aa20.21■□□□□ 0.83
SEC24C-205ENST00000496827 KIF21BO75037 1637 aa20.18■□□□□ 0.82
SEC24C-205ENST00000496827 UGGT2Q9NYU1 1516 aa20.17■□□□□ 0.82
SEC24C-205ENST00000496827 EHMT2Q96KQ7 1210 aa20.15■□□□□ 0.82
SEC24C-205ENST00000496827 DISP1Q96F81 1524 aa20.14■□□□□ 0.81
SEC24C-205ENST00000496827 TTBK1Q5TCY1 1321 aaPredicted RBP20.14■□□□□ 0.81
SEC24C-205ENST00000496827 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
SEC24C-205ENST00000496827 PTPRGP23470 1445 aa20.12■□□□□ 0.81
SEC24C-205ENST00000496827 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
SEC24C-205ENST00000496827 GOLGA3Q08378 1498 aa20.1■□□□□ 0.81
SEC24C-205ENST00000496827 KIAA0556O60303 1618 aa20.09■□□□□ 0.81
SEC24C-205ENST00000496827 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
SEC24C-205ENST00000496827 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
SEC24C-205ENST00000496827 NPM1P06748 294 aaKnown RBP eCLIP20.02■□□□□ 0.8
SEC24C-205ENST00000496827 TRHP20396 242 aaPredicted RBP19.99■□□□□ 0.79
SEC24C-205ENST00000496827 UACAQ9BZF9 1416 aa19.98■□□□□ 0.79
SEC24C-205ENST00000496827 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
SEC24C-205ENST00000496827 SAMD9Q5K651 1589 aa19.96■□□□□ 0.79
SEC24C-205ENST00000496827 UHRF1BP1LA0JNW5 1464 aa19.93■□□□□ 0.78
SEC24C-205ENST00000496827 ABCC2Q92887 1545 aa19.92■□□□□ 0.78
SEC24C-205ENST00000496827 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
SEC24C-205ENST00000496827 PLB1Q6P1J6 1458 aa19.9■□□□□ 0.78
SEC24C-205ENST00000496827 FHOD3Q2V2M9 1422 aa19.89■□□□□ 0.77
SEC24C-205ENST00000496827 ABCA8O94911 1581 aa19.87■□□□□ 0.77
SEC24C-205ENST00000496827 MAPKBP1O60336 1514 aa19.84■□□□□ 0.77
SEC24C-205ENST00000496827 KDM5BQ9UGL1 1544 aa19.84■□□□□ 0.77
SEC24C-205ENST00000496827 ARHGAP35Q9NRY4 1499 aa19.83■□□□□ 0.76
SEC24C-205ENST00000496827 LOC105371045A0A1W2PR82 267 aa19.8■□□□□ 0.76
SEC24C-205ENST00000496827 ASXL2Q76L83 1435 aa19.78■□□□□ 0.76
SEC24C-205ENST00000496827 ZCCHC11Q5TAX3 1644 aaKnown RBP19.78■□□□□ 0.76
SEC24C-205ENST00000496827 RAPGEF6Q8TEU7 1601 aa19.78■□□□□ 0.76
SEC24C-205ENST00000496827 FAM69CQ0P6D2 419 aa19.78■□□□□ 0.76
SEC24C-205ENST00000496827 ARID3CA6NKF2 412 aa19.77■□□□□ 0.76
SEC24C-205ENST00000496827 ABCC10Q5T3U5 1492 aa19.77■□□□□ 0.76
SEC24C-205ENST00000496827 CLIP1P30622 1438 aa19.76■□□□□ 0.75
SEC24C-205ENST00000496827 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
SEC24C-205ENST00000496827 ATP10BO94823 1461 aa19.73■□□□□ 0.75
SEC24C-205ENST00000496827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.73■□□□□ 0.75
SEC24C-205ENST00000496827 HNRNPUL2Q1KMD3 747 aaKnown RBP19.73■□□□□ 0.75
SEC24C-205ENST00000496827 DIP2BQ9P265 1576 aa19.71■□□□□ 0.75
SEC24C-205ENST00000496827 ATP1B4Q9UN42 357 aaPredicted RBP19.71■□□□□ 0.75
SEC24C-205ENST00000496827 NUP153P49790 1475 aaKnown RBP19.71■□□□□ 0.75
SEC24C-205ENST00000496827 KIF13AQ9H1H9 1805 aa19.7■□□□□ 0.74
SEC24C-205ENST00000496827 WDR7Q9Y4E6 1490 aa19.68■□□□□ 0.74
SEC24C-205ENST00000496827 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
SEC24C-205ENST00000496827 KCNH8Q96L42 1107 aa19.66■□□□□ 0.74
SEC24C-205ENST00000496827 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
SEC24C-205ENST00000496827 GLI2P10070 1586 aa19.63■□□□□ 0.73
SEC24C-205ENST00000496827 HECW1Q76N89 1606 aa19.62■□□□□ 0.73
SEC24C-205ENST00000496827 PLEKHD1A6NEE1 506 aa19.62■□□□□ 0.73
SEC24C-205ENST00000496827 CASKIN1Q8WXD9 1431 aa19.59■□□□□ 0.73
SEC24C-205ENST00000496827 CDK13Q14004 1512 aaKnown RBP19.58■□□□□ 0.73
SEC24C-205ENST00000496827 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
SEC24C-205ENST00000496827 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
SEC24C-205ENST00000496827 TSPOAP1O95153 1857 aa19.55■□□□□ 0.72
SEC24C-205ENST00000496827 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
SEC24C-205ENST00000496827 MAP3K4Q9Y6R4 1608 aa19.53■□□□□ 0.72
SEC24C-205ENST00000496827 CD109Q6YHK3 1445 aa19.51■□□□□ 0.71
SEC24C-205ENST00000496827 CCDC18Q5T9S5 1454 aa19.5■□□□□ 0.71
SEC24C-205ENST00000496827 CFAP43Q8NDM7 1665 aa19.49■□□□□ 0.71
SEC24C-205ENST00000496827 LRRIQ1Q96JM4 1722 aa19.48■□□□□ 0.71
SEC24C-205ENST00000496827 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
SEC24C-205ENST00000496827 ABCA9Q8IUA7 1624 aa19.47■□□□□ 0.71
SEC24C-205ENST00000496827 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
SEC24C-205ENST00000496827 MAGI3Q5TCQ9 1506 aa19.45■□□□□ 0.7
SEC24C-205ENST00000496827 TROQ12816 1431 aaPredicted RBP19.44■□□□□ 0.7
SEC24C-205ENST00000496827 VPS8Q8N3P4 1428 aa19.43■□□□□ 0.7
SEC24C-205ENST00000496827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.41■□□□□ 0.7
SEC24C-205ENST00000496827 KDM6BO15054 1643 aa19.4■□□□□ 0.7
SEC24C-205ENST00000496827 KIF14Q15058 1648 aa19.37■□□□□ 0.69
SEC24C-205ENST00000496827 TTC37Q6PGP7 1564 aa19.36■□□□□ 0.69
SEC24C-205ENST00000496827 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
SEC24C-205ENST00000496827 PHLDB1Q86UU1 1377 aa19.34■□□□□ 0.69
SEC24C-205ENST00000496827 COL17A1Q9UMD9 1497 aaPredicted RBP19.34■□□□□ 0.69
SEC24C-205ENST00000496827 PLCH2O75038 1416 aa19.33■□□□□ 0.68
SEC24C-205ENST00000496827 NEO1Q92859 1461 aa19.32■□□□□ 0.68
SEC24C-205ENST00000496827 FANCAO15360 1455 aa19.3■□□□□ 0.68
SEC24C-205ENST00000496827 APLP2Q06481 763 aa19.29■□□□□ 0.68
SEC24C-205ENST00000496827 EFCAB2Q5VUJ9 269 aa19.29■□□□□ 0.68
SEC24C-205ENST00000496827 TIAM1Q13009 1591 aa19.28■□□□□ 0.68
SEC24C-205ENST00000496827 ARAP3Q8WWN8 1544 aa19.28■□□□□ 0.68
SEC24C-205ENST00000496827 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
SEC24C-205ENST00000496827 AKNAQ7Z591 1439 aa19.27■□□□□ 0.68
SEC24C-205ENST00000496827 EHBP1L1Q8N3D4 1523 aa19.26■□□□□ 0.67
SEC24C-205ENST00000496827 CFAP74Q9C0B2 1584 aa19.26■□□□□ 0.67
SEC24C-205ENST00000496827 MAP3K1Q13233 1512 aa19.25■□□□□ 0.67
SEC24C-205ENST00000496827 ARHGAP5Q13017 1502 aa19.24■□□□□ 0.67
SEC24C-205ENST00000496827 RAPGEF3O95398 923 aa19.23■□□□□ 0.67
SEC24C-205ENST00000496827 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms