RNA–Protein interactions for RNA: ENST00000496827.1

SEC24C-205, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 3

Gene SEC24C, Length 948 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-205ENST00000496827 NISCHQ9Y2I1 1504 aa29.49■■■□□ 2.31
SEC24C-205ENST00000496827 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.78
SEC24C-205ENST00000496827 ABCC9O60706 1549 aa25.58■■□□□ 1.68
SEC24C-205ENST00000496827 DCAF8L2P0C7V8 631 aa24.72■■□□□ 1.55
SEC24C-205ENST00000496827 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
SEC24C-205ENST00000496827 NACADO15069 1562 aa24.59■■□□□ 1.53
SEC24C-205ENST00000496827 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
SEC24C-205ENST00000496827 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.51
SEC24C-205ENST00000496827 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
SEC24C-205ENST00000496827 UNC13AQ9UPW8 1703 aa23.99■■□□□ 1.43
SEC24C-205ENST00000496827 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
SEC24C-205ENST00000496827 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
SEC24C-205ENST00000496827 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
SEC24C-205ENST00000496827 SHROOM4Q9ULL8 1493 aa23.58■■□□□ 1.37
SEC24C-205ENST00000496827 DNAJC5BQ9UF47 199 aa23.41■■□□□ 1.34
SEC24C-205ENST00000496827 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
SEC24C-205ENST00000496827 CC2D2AQ9P2K1 1620 aa23.1■■□□□ 1.29
SEC24C-205ENST00000496827 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
SEC24C-205ENST00000496827 BAZ1AQ9NRL2 1556 aaPredicted RBP22.85■■□□□ 1.25
SEC24C-205ENST00000496827 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
SEC24C-205ENST00000496827 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
SEC24C-205ENST00000496827 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
SEC24C-205ENST00000496827 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
SEC24C-205ENST00000496827 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
SEC24C-205ENST00000496827 PEG3Q9GZU2 1588 aa22.61■■□□□ 1.21
SEC24C-205ENST00000496827 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
SEC24C-205ENST00000496827 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
SEC24C-205ENST00000496827 RSF1Q96T23 1441 aaPredicted RBP22.51■■□□□ 1.19
SEC24C-205ENST00000496827 WIZO95785 1651 aa22.48■■□□□ 1.19
SEC24C-205ENST00000496827 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
SEC24C-205ENST00000496827 NESP48681 1621 aa22.13■■□□□ 1.13
SEC24C-205ENST00000496827 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.12
SEC24C-205ENST00000496827 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
SEC24C-205ENST00000496827 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
SEC24C-205ENST00000496827 ERCC6Q03468 1493 aa22.04■■□□□ 1.12
SEC24C-205ENST00000496827 CCDC88BA6NC98 1476 aa22.01■■□□□ 1.11
SEC24C-205ENST00000496827 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
SEC24C-205ENST00000496827 CFTRP13569 1480 aa21.93■■□□□ 1.1
SEC24C-205ENST00000496827 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
SEC24C-205ENST00000496827 FANCD2Q9BXW9 1451 aa21.8■■□□□ 1.08
SEC24C-205ENST00000496827 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
SEC24C-205ENST00000496827 CUX2O14529 1486 aa21.75■■□□□ 1.07
SEC24C-205ENST00000496827 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
SEC24C-205ENST00000496827 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
SEC24C-205ENST00000496827 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
SEC24C-205ENST00000496827 WDR62O43379 1518 aa21.61■■□□□ 1.05
SEC24C-205ENST00000496827 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
SEC24C-205ENST00000496827 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
SEC24C-205ENST00000496827 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
SEC24C-205ENST00000496827 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
SEC24C-205ENST00000496827 CUX1P39880 1505 aa21.31■■□□□ 1
SEC24C-205ENST00000496827 IFT140Q96RY7 1462 aa21.31■■□□□ 1
SEC24C-205ENST00000496827 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
SEC24C-205ENST00000496827 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
SEC24C-205ENST00000496827 SOGA1O94964 1423 aa21.23■□□□□ 0.99
SEC24C-205ENST00000496827 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
SEC24C-205ENST00000496827 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
SEC24C-205ENST00000496827 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
SEC24C-205ENST00000496827 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
SEC24C-205ENST00000496827 TOP2BQ02880 1626 aa21.14■□□□□ 0.97
SEC24C-205ENST00000496827 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
SEC24C-205ENST00000496827 BIVM-ERCC5R4GMW8 1640 aa21.13■□□□□ 0.97
SEC24C-205ENST00000496827 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.971e-6■■■■□ 23.2
SEC24C-205ENST00000496827 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
SEC24C-205ENST00000496827 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
SEC24C-205ENST00000496827 DNAJC5Q9H3Z4 198 aa21.04■□□□□ 0.96
SEC24C-205ENST00000496827 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
SEC24C-205ENST00000496827 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
SEC24C-205ENST00000496827 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
SEC24C-205ENST00000496827 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
SEC24C-205ENST00000496827 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
SEC24C-205ENST00000496827 ABCA5Q8WWZ7 1642 aa20.91■□□□□ 0.94
SEC24C-205ENST00000496827 FBLN2P98095 1184 aa20.9■□□□□ 0.94
SEC24C-205ENST00000496827 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
SEC24C-205ENST00000496827 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
SEC24C-205ENST00000496827 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
SEC24C-205ENST00000496827 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
SEC24C-205ENST00000496827 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
SEC24C-205ENST00000496827 CHD1O14646 1710 aa20.81■□□□□ 0.92
SEC24C-205ENST00000496827 SYNJ2O15056 1496 aa20.8■□□□□ 0.92
SEC24C-205ENST00000496827 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
SEC24C-205ENST00000496827 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
SEC24C-205ENST00000496827 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
SEC24C-205ENST00000496827 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
SEC24C-205ENST00000496827 IGF1RP08069 1367 aa20.7■□□□□ 0.9
SEC24C-205ENST00000496827 GRIN2AQ12879 1464 aa20.67■□□□□ 0.9
SEC24C-205ENST00000496827 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
SEC24C-205ENST00000496827 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
SEC24C-205ENST00000496827 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
SEC24C-205ENST00000496827 CUL7Q14999 1698 aa20.59■□□□□ 0.89
SEC24C-205ENST00000496827 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.89
SEC24C-205ENST00000496827 NUP160Q12769 1436 aa20.57■□□□□ 0.88
SEC24C-205ENST00000496827 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
SEC24C-205ENST00000496827 ARHGEF11O15085 1522 aa20.53■□□□□ 0.88
SEC24C-205ENST00000496827 RIMBP3CA6NJZ7 1639 aa20.51■□□□□ 0.87
SEC24C-205ENST00000496827 RIMBP3BA6NNM3 1639 aa20.51■□□□□ 0.87
SEC24C-205ENST00000496827 RIMBP3Q9UFD9 1639 aa20.51■□□□□ 0.87
SEC24C-205ENST00000496827 RAPGEF2Q9Y4G8 1499 aa20.46■□□□□ 0.87
SEC24C-205ENST00000496827 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
SEC24C-205ENST00000496827 EEA1Q15075 1411 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms