RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 PRXQ9BXM0 1461 aa27.86■■■□□ 2.05
CNOT3-207ENST00000496327 KIAA0586Q9BVV6 1533 aa27.84■■■□□ 2.05
CNOT3-207ENST00000496327 JPH4Q96JJ6 628 aa27.81■■■□□ 2.04
CNOT3-207ENST00000496327 FAM9AQ8IZU1 332 aaPredicted RBP27.8■■■□□ 2.04
CNOT3-207ENST00000496327 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
CNOT3-207ENST00000496327 ARAP1Q96P48 1450 aa27.76■■■□□ 2.04
CNOT3-207ENST00000496327 CYB5RLQ6IPT4 315 aa27.73■■■□□ 2.03
CNOT3-207ENST00000496327 PRG4Q92954 1404 aaPredicted RBP27.73■■■□□ 2.03
CNOT3-207ENST00000496327 ERCC6L2Q5T890 1561 aa27.69■■■□□ 2.02
CNOT3-207ENST00000496327 IQGAP2Q13576 1575 aa27.66■■■□□ 2.02
CNOT3-207ENST00000496327 KIF21BO75037 1637 aa27.57■■■□□ 2
CNOT3-207ENST00000496327 CARMIL2Q6F5E8 1435 aa27.56■■■□□ 2
CNOT3-207ENST00000496327 UGGT2Q9NYU1 1516 aa27.55■■■□□ 2
CNOT3-207ENST00000496327 CTTNBP2Q8WZ74 1663 aa27.52■■■□□ 2
CNOT3-207ENST00000496327 DISP1Q96F81 1524 aa27.47■■□□□ 1.99
CNOT3-207ENST00000496327 GOLGA3Q08378 1498 aa27.47■■□□□ 1.99
CNOT3-207ENST00000496327 TNIKQ9UKE5 1360 aa27.46■■□□□ 1.99
CNOT3-207ENST00000496327 PTPRGP23470 1445 aa27.43■■□□□ 1.98
CNOT3-207ENST00000496327 EHMT2Q96KQ7 1210 aa27.41■■□□□ 1.98
CNOT3-207ENST00000496327 KIAA0556O60303 1618 aa27.4■■□□□ 1.98
CNOT3-207ENST00000496327 UBTFP17480 764 aaKnown RBP27.39■■□□□ 1.98
CNOT3-207ENST00000496327 TTBK1Q5TCY1 1321 aaPredicted RBP27.37■■□□□ 1.97
CNOT3-207ENST00000496327 RANGAP1P46060 587 aaPredicted RBP27.27■■□□□ 1.96
CNOT3-207ENST00000496327 P3H3Q8IVL6 736 aa27.25■■□□□ 1.95
CNOT3-207ENST00000496327 SAMD9Q5K651 1589 aa27.25■■□□□ 1.95
CNOT3-207ENST00000496327 UACAQ9BZF9 1416 aa27.24■■□□□ 1.95
CNOT3-207ENST00000496327 ADCY10Q96PN6 1610 aa27.23■■□□□ 1.95
CNOT3-207ENST00000496327 NPM1P06748 294 aaKnown RBP eCLIP27.22■■□□□ 1.95
CNOT3-207ENST00000496327 UHRF1BP1LA0JNW5 1464 aa27.21■■□□□ 1.95
CNOT3-207ENST00000496327 EFCAB5A4FU69 1503 aa27.2■■□□□ 1.94
CNOT3-207ENST00000496327 ABCC2Q92887 1545 aa27.17■■□□□ 1.94
CNOT3-207ENST00000496327 FHOD3Q2V2M9 1422 aa27.15■■□□□ 1.94
CNOT3-207ENST00000496327 PLB1Q6P1J6 1458 aa27.14■■□□□ 1.94
CNOT3-207ENST00000496327 TRHP20396 242 aaPredicted RBP27.13■■□□□ 1.93
CNOT3-207ENST00000496327 ABCA8O94911 1581 aa27.1■■□□□ 1.93
CNOT3-207ENST00000496327 ARHGAP35Q9NRY4 1499 aa27.08■■□□□ 1.93
CNOT3-207ENST00000496327 MAPKBP1O60336 1514 aa27.07■■□□□ 1.92
CNOT3-207ENST00000496327 KDM5BQ9UGL1 1544 aa27.06■■□□□ 1.92
CNOT3-207ENST00000496327 CLIP1P30622 1438 aa26.98■■□□□ 1.91
CNOT3-207ENST00000496327 LOC105371045A0A1W2PR82 267 aa26.97■■□□□ 1.91
CNOT3-207ENST00000496327 FMN1Q68DA7 1419 aa26.97■■□□□ 1.91
CNOT3-207ENST00000496327 ASXL2Q76L83 1435 aa26.97■■□□□ 1.91
CNOT3-207ENST00000496327 RAPGEF6Q8TEU7 1601 aa26.96■■□□□ 1.91
CNOT3-207ENST00000496327 ABCC10Q5T3U5 1492 aa26.95■■□□□ 1.91
CNOT3-207ENST00000496327 ZCCHC11Q5TAX3 1644 aaKnown RBP26.94■■□□□ 1.9
CNOT3-207ENST00000496327 ARID3CA6NKF2 412 aa26.91■■□□□ 1.9
CNOT3-207ENST00000496327 ATP10BO94823 1461 aa26.91■■□□□ 1.9
CNOT3-207ENST00000496327 NUP153P49790 1475 aaKnown RBP26.91■■□□□ 1.9
CNOT3-207ENST00000496327 FAM69CQ0P6D2 419 aa26.9■■□□□ 1.9
CNOT3-207ENST00000496327 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
CNOT3-207ENST00000496327 DIP2BQ9P265 1576 aa26.87■■□□□ 1.89
CNOT3-207ENST00000496327 WDR7Q9Y4E6 1490 aa26.86■■□□□ 1.89
CNOT3-207ENST00000496327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.82■■□□□ 1.88
CNOT3-207ENST00000496327 HNRNPUL2Q1KMD3 747 aaKnown RBP26.82■■□□□ 1.88
CNOT3-207ENST00000496327 EPRSP07814 1512 aaKnown RBP26.8■■□□□ 1.88
CNOT3-207ENST00000496327 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
CNOT3-207ENST00000496327 KIF13AQ9H1H9 1805 aa26.78■■□□□ 1.88
CNOT3-207ENST00000496327 HECW1Q76N89 1606 aa26.77■■□□□ 1.88
CNOT3-207ENST00000496327 GLI2P10070 1586 aa26.76■■□□□ 1.87
CNOT3-207ENST00000496327 CASKIN1Q8WXD9 1431 aa26.76■■□□□ 1.87
CNOT3-207ENST00000496327 KCNH8Q96L42 1107 aa26.73■■□□□ 1.87
CNOT3-207ENST00000496327 PCF11O94913 1555 aaKnown RBP26.71■■□□□ 1.87
CNOT3-207ENST00000496327 CDK13Q14004 1512 aaKnown RBP26.71■■□□□ 1.87
CNOT3-207ENST00000496327 PLEKHD1A6NEE1 506 aa26.7■■□□□ 1.86
CNOT3-207ENST00000496327 FYCO1Q9BQS8 1478 aa26.69■■□□□ 1.86
CNOT3-207ENST00000496327 CCDC18Q5T9S5 1454 aa26.64■■□□□ 1.86
CNOT3-207ENST00000496327 CDK11AQ9UQ88 783 aaPredicted RBP26.64■■□□□ 1.86
CNOT3-207ENST00000496327 CD109Q6YHK3 1445 aa26.6■■□□□ 1.85
CNOT3-207ENST00000496327 MAP3K4Q9Y6R4 1608 aa26.6■■□□□ 1.85
CNOT3-207ENST00000496327 VPS8Q8N3P4 1428 aa26.56■■□□□ 1.84
CNOT3-207ENST00000496327 TROQ12816 1431 aaPredicted RBP26.55■■□□□ 1.84
CNOT3-207ENST00000496327 TEX14Q8IWB6 1497 aa26.55■■□□□ 1.84
CNOT3-207ENST00000496327 CFAP43Q8NDM7 1665 aa26.54■■□□□ 1.84
CNOT3-207ENST00000496327 MAGI3Q5TCQ9 1506 aa26.54■■□□□ 1.84
CNOT3-207ENST00000496327 ABCA9Q8IUA7 1624 aa26.54■■□□□ 1.84
CNOT3-207ENST00000496327 TSPOAP1O95153 1857 aa26.52■■□□□ 1.84
CNOT3-207ENST00000496327 LRRIQ1Q96JM4 1722 aa26.52■■□□□ 1.84
CNOT3-207ENST00000496327 PPRC1Q5VV67 1664 aaKnown RBP26.51■■□□□ 1.83
CNOT3-207ENST00000496327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.47■■□□□ 1.83
CNOT3-207ENST00000496327 KIF14Q15058 1648 aa26.43■■□□□ 1.82
CNOT3-207ENST00000496327 TTC37Q6PGP7 1564 aa26.41■■□□□ 1.82
CNOT3-207ENST00000496327 KDM6BO15054 1643 aa26.4■■□□□ 1.82
CNOT3-207ENST00000496327 MTUS2Q5JR59 1369 aa26.39■■□□□ 1.82
CNOT3-207ENST00000496327 PHLDB1Q86UU1 1377 aa26.37■■□□□ 1.81
CNOT3-207ENST00000496327 PLCH2O75038 1416 aa26.36■■□□□ 1.81
CNOT3-207ENST00000496327 NEO1Q92859 1461 aa26.36■■□□□ 1.81
CNOT3-207ENST00000496327 COL17A1Q9UMD9 1497 aaPredicted RBP26.34■■□□□ 1.81
CNOT3-207ENST00000496327 FANCAO15360 1455 aa26.32■■□□□ 1.8
CNOT3-207ENST00000496327 EHBP1L1Q8N3D4 1523 aa26.32■■□□□ 1.8
CNOT3-207ENST00000496327 TIAM1Q13009 1591 aa26.32■■□□□ 1.8
CNOT3-207ENST00000496327 MAP3K1Q13233 1512 aa26.3■■□□□ 1.8
CNOT3-207ENST00000496327 ARAP3Q8WWN8 1544 aa26.29■■□□□ 1.8
CNOT3-207ENST00000496327 EFCAB2Q5VUJ9 269 aa26.28■■□□□ 1.8
CNOT3-207ENST00000496327 APLP2Q06481 763 aa26.27■■□□□ 1.8
CNOT3-207ENST00000496327 AKNAQ7Z591 1439 aa26.27■■□□□ 1.8
CNOT3-207ENST00000496327 CFAP74Q9C0B2 1584 aa26.26■■□□□ 1.79
CNOT3-207ENST00000496327 MYO5CQ9NQX4 1742 aa26.24■■□□□ 1.79
CNOT3-207ENST00000496327 ARHGAP5Q13017 1502 aa26.24■■□□□ 1.79
CNOT3-207ENST00000496327 LRRC9Q6ZRR7 1453 aa26.23■■□□□ 1.79
CNOT3-207ENST00000496327 CCNB3Q8WWL7 1395 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms