RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 GRIN2AQ12879 1464 aa27.83■■■□□ 2.05
PSMB4-206ENST00000495288 CTTNBP2Q8WZ74 1663 aa27.76■■■□□ 2.03
PSMB4-206ENST00000495288 P3H3Q8IVL6 736 aa27.69■■■□□ 2.02
PSMB4-206ENST00000495288 KIAA0586Q9BVV6 1533 aa27.66■■■□□ 2.02
PSMB4-206ENST00000495288 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.02
PSMB4-206ENST00000495288 CEP170Q5SW79 1584 aa27.64■■■□□ 2.01
PSMB4-206ENST00000495288 CHD1O14646 1710 aa27.64■■■□□ 2.01
PSMB4-206ENST00000495288 NUP160Q12769 1436 aa27.63■■■□□ 2.01
PSMB4-206ENST00000495288 IQGAP2Q13576 1575 aa27.63■■■□□ 2.01
PSMB4-206ENST00000495288 ARAP1Q96P48 1450 aa27.58■■■□□ 2.01
PSMB4-206ENST00000495288 EFCAB5A4FU69 1503 aa27.54■■■□□ 2
PSMB4-206ENST00000495288 JPH4Q96JJ6 628 aa27.53■■■□□ 2
PSMB4-206ENST00000495288 VPS8Q8N3P4 1428 aa27.52■■■□□ 2
PSMB4-206ENST00000495288 FHOD3Q2V2M9 1422 aa27.5■■□□□ 1.99
PSMB4-206ENST00000495288 UGGT2Q9NYU1 1516 aa27.49■■□□□ 1.99
PSMB4-206ENST00000495288 SAMD9Q5K651 1589 aa27.46■■□□□ 1.99
PSMB4-206ENST00000495288 APLP2Q06481 763 aa27.43■■□□□ 1.98
PSMB4-206ENST00000495288 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
PSMB4-206ENST00000495288 PPARGC1BQ86YN6 1023 aaKnown RBP27.42■■□□□ 1.98
PSMB4-206ENST00000495288 ATP1B4Q9UN42 357 aaPredicted RBP27.4■■□□□ 1.98
PSMB4-206ENST00000495288 OSCARQ8IYS5 282 aa27.39■■□□□ 1.98
PSMB4-206ENST00000495288 DISP1Q96F81 1524 aa27.38■■□□□ 1.97
PSMB4-206ENST00000495288 CARMIL2Q6F5E8 1435 aa27.38■■□□□ 1.97
PSMB4-206ENST00000495288 PRG4Q92954 1404 aaPredicted RBP27.35■■□□□ 1.97
PSMB4-206ENST00000495288 FMN1Q68DA7 1419 aa27.34■■□□□ 1.97
PSMB4-206ENST00000495288 KIAA0556O60303 1618 aa27.34■■□□□ 1.97
PSMB4-206ENST00000495288 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
PSMB4-206ENST00000495288 CASKIN1Q8WXD9 1431 aa27.24■■□□□ 1.95
PSMB4-206ENST00000495288 SHROOM2Q13796 1616 aa27.24■■□□□ 1.95
PSMB4-206ENST00000495288 PCF11O94913 1555 aaKnown RBP27.22■■□□□ 1.95
PSMB4-206ENST00000495288 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
PSMB4-206ENST00000495288 PTPRGP23470 1445 aa27.16■■□□□ 1.94
PSMB4-206ENST00000495288 ERCC6L2Q5T890 1561 aa27.14■■□□□ 1.94
PSMB4-206ENST00000495288 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
PSMB4-206ENST00000495288 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
PSMB4-206ENST00000495288 PLB1Q6P1J6 1458 aa27.06■■□□□ 1.92
PSMB4-206ENST00000495288 MAP3K1Q13233 1512 aa27.06■■□□□ 1.92
PSMB4-206ENST00000495288 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
PSMB4-206ENST00000495288 TRIM26Q12899 539 aaPredicted RBP27.06■■□□□ 1.92
PSMB4-206ENST00000495288 HECW1Q76N89 1606 aa27.05■■□□□ 1.92
PSMB4-206ENST00000495288 RAPGEF6Q8TEU7 1601 aa27.05■■□□□ 1.92
PSMB4-206ENST00000495288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.04■■□□□ 1.92
PSMB4-206ENST00000495288 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
PSMB4-206ENST00000495288 EPRSP07814 1512 aaKnown RBP26.99■■□□□ 1.91
PSMB4-206ENST00000495288 CCDC18Q5T9S5 1454 aa26.99■■□□□ 1.91
PSMB4-206ENST00000495288 CFAP43Q8NDM7 1665 aa26.98■■□□□ 1.91
PSMB4-206ENST00000495288 ABCA8O94911 1581 aa26.98■■□□□ 1.91
PSMB4-206ENST00000495288 PCGF6Q9BYE7 350 aa26.98■■□□□ 1.91
PSMB4-206ENST00000495288 NUP153P49790 1475 aaKnown RBP26.98■■□□□ 1.91
PSMB4-206ENST00000495288 LRRC9Q6ZRR7 1453 aa26.98■■□□□ 1.91
PSMB4-206ENST00000495288 LRRIQ1Q96JM4 1722 aa26.96■■□□□ 1.91
PSMB4-206ENST00000495288 UACAQ9BZF9 1416 aa26.96■■□□□ 1.91
PSMB4-206ENST00000495288 MTUS2Q5JR59 1369 aa26.95■■□□□ 1.9
PSMB4-206ENST00000495288 CDK13Q14004 1512 aaKnown RBP26.95■■□□□ 1.9
PSMB4-206ENST00000495288 CDK11AQ9UQ88 783 aaPredicted RBP26.9■■□□□ 1.9
PSMB4-206ENST00000495288 ATP10BO94823 1461 aa26.85■■□□□ 1.89
PSMB4-206ENST00000495288 ABCC2Q92887 1545 aa26.83■■□□□ 1.89
PSMB4-206ENST00000495288 PLEKHD1A6NEE1 506 aa26.82■■□□□ 1.88
PSMB4-206ENST00000495288 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
PSMB4-206ENST00000495288 MAGI3Q5TCQ9 1506 aa26.8■■□□□ 1.88
PSMB4-206ENST00000495288 EHBP1L1Q8N3D4 1523 aa26.8■■□□□ 1.88
PSMB4-206ENST00000495288 UHRF1BP1LA0JNW5 1464 aa26.79■■□□□ 1.88
PSMB4-206ENST00000495288 TROQ12816 1431 aaPredicted RBP26.73■■□□□ 1.87
PSMB4-206ENST00000495288 PHLDB1Q86UU1 1377 aa26.72■■□□□ 1.87
PSMB4-206ENST00000495288 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
PSMB4-206ENST00000495288 NCOA2Q15596 1464 aa26.72■■□□□ 1.87
PSMB4-206ENST00000495288 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
PSMB4-206ENST00000495288 RIMBP3CA6NJZ7 1639 aa26.7■■□□□ 1.86
PSMB4-206ENST00000495288 RIMBP3BA6NNM3 1639 aa26.7■■□□□ 1.86
PSMB4-206ENST00000495288 RIMBP3Q9UFD9 1639 aa26.7■■□□□ 1.86
PSMB4-206ENST00000495288 NPM1P06748 294 aaKnown RBP eCLIP26.7■■□□□ 1.86
PSMB4-206ENST00000495288 ADCY10Q96PN6 1610 aa26.68■■□□□ 1.86
PSMB4-206ENST00000495288 KDM5BQ9UGL1 1544 aa26.67■■□□□ 1.86
PSMB4-206ENST00000495288 ZCCHC11Q5TAX3 1644 aaKnown RBP26.65■■□□□ 1.86
PSMB4-206ENST00000495288 CCNB3Q8WWL7 1395 aa26.63■■□□□ 1.85
PSMB4-206ENST00000495288 KCNH8Q96L42 1107 aa26.63■■□□□ 1.85
PSMB4-206ENST00000495288 FAM50AQ14320 339 aaKnown RBP26.62■■□□□ 1.85
PSMB4-206ENST00000495288 RRBP1Q9P2E9 1410 aaKnown RBP26.61■■□□□ 1.85
PSMB4-206ENST00000495288 MYOM3Q5VTT5 1437 aa26.58■■□□□ 1.85
PSMB4-206ENST00000495288 KIF14Q15058 1648 aa26.56■■□□□ 1.84
PSMB4-206ENST00000495288 ITGAEP38570 1179 aa26.55■■□□□ 1.84
PSMB4-206ENST00000495288 FGD6Q6ZV73 1430 aa26.55■■□□□ 1.84
PSMB4-206ENST00000495288 CFDP1Q9UEE9 299 aaPredicted RBP26.48■■□□□ 1.83
PSMB4-206ENST00000495288 ASXL2Q76L83 1435 aa26.48■■□□□ 1.83
PSMB4-206ENST00000495288 ABCC10Q5T3U5 1492 aa26.47■■□□□ 1.83
PSMB4-206ENST00000495288 GPATCH8Q9UKJ3 1502 aaKnown RBP26.46■■□□□ 1.83
PSMB4-206ENST00000495288 ZNF777Q9ULD5 760 aaPredicted RBP26.46■■□□□ 1.83
PSMB4-206ENST00000495288 WDR7Q9Y4E6 1490 aa26.46■■□□□ 1.83
PSMB4-206ENST00000495288 MIA2Q96PC5 1412 aa26.45■■□□□ 1.82
PSMB4-206ENST00000495288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.43■■□□□ 1.82
PSMB4-206ENST00000495288 PTPN23Q9H3S7 1636 aa26.43■■□□□ 1.82
PSMB4-206ENST00000495288 ZNF644Q9H582 1327 aaPredicted RBP26.39■■□□□ 1.82
PSMB4-206ENST00000495288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.39■■□□□ 1.822e-13■■■□□ 17.2
PSMB4-206ENST00000495288 ITSN2Q9NZM3 1697 aa26.38■■□□□ 1.81
PSMB4-206ENST00000495288 TCOF1Q13428 1488 aaKnown RBP26.36■■□□□ 1.81
PSMB4-206ENST00000495288 TTC37Q6PGP7 1564 aa26.35■■□□□ 1.81
PSMB4-206ENST00000495288 CDC42BPAQ5VT25 1732 aa26.34■■□□□ 1.81
PSMB4-206ENST00000495288 EFCAB2Q5VUJ9 269 aa26.29■■□□□ 1.8
PSMB4-206ENST00000495288 CAMSAP2Q08AD1 1489 aa26.29■■□□□ 1.8
PSMB4-206ENST00000495288 ARHGAP5Q13017 1502 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms