RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.03
PSMB4-206ENST00000495288 CCDC180Q9P1Z9 1646 aa35.2■■■■□ 3.23
PSMB4-206ENST00000495288 ABCC9O60706 1549 aa33.75■■■□□ 2.99
PSMB4-206ENST00000495288 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
PSMB4-206ENST00000495288 DCAF8L2P0C7V8 631 aa33.62■■■□□ 2.97
PSMB4-206ENST00000495288 DCAF1Q9Y4B6 1507 aa33.23■■■□□ 2.91
PSMB4-206ENST00000495288 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
PSMB4-206ENST00000495288 NACADO15069 1562 aa32.93■■■□□ 2.86
PSMB4-206ENST00000495288 RB1CC1Q8TDY2 1594 aa32.75■■■□□ 2.83
PSMB4-206ENST00000495288 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
PSMB4-206ENST00000495288 SCRIBQ14160 1630 aa32.4■■■□□ 2.78
PSMB4-206ENST00000495288 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
PSMB4-206ENST00000495288 PABPN1Q86U42 306 aaKnown RBP eCLIP31.84■■■□□ 2.69
PSMB4-206ENST00000495288 BICRAQ9NZM4 1560 aa31.72■■■□□ 2.67
PSMB4-206ENST00000495288 SUPT5HO00267 1087 aaKnown RBP31.37■■■□□ 2.61
PSMB4-206ENST00000495288 CECR2Q9BXF3 1484 aa31.34■■■□□ 2.61
PSMB4-206ENST00000495288 RSF1Q96T23 1441 aaPredicted RBP31.12■■■□□ 2.57
PSMB4-206ENST00000495288 MROH2BQ7Z745 1585 aa31.1■■■□□ 2.57
PSMB4-206ENST00000495288 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
PSMB4-206ENST00000495288 SMARCA4P51532 1647 aa31■■■□□ 2.55
PSMB4-206ENST00000495288 WIZO95785 1651 aa30.81■■■□□ 2.52
PSMB4-206ENST00000495288 EIF4G1Q04637 1599 aaKnown RBP30.81■■■□□ 2.52
PSMB4-206ENST00000495288 ATAD2BQ9ULI0 1458 aa30.62■■■□□ 2.49
PSMB4-206ENST00000495288 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
PSMB4-206ENST00000495288 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
PSMB4-206ENST00000495288 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
PSMB4-206ENST00000495288 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
PSMB4-206ENST00000495288 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
PSMB4-206ENST00000495288 NCAPD3P42695 1498 aa30.4■■■□□ 2.46
PSMB4-206ENST00000495288 HMGXB3Q12766 1538 aa30.27■■■□□ 2.44
PSMB4-206ENST00000495288 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
PSMB4-206ENST00000495288 DNAJC5BQ9UF47 199 aa30.12■■■□□ 2.41
PSMB4-206ENST00000495288 CHIC1Q5VXU3 224 aa29.77■■■□□ 2.36
PSMB4-206ENST00000495288 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.34
PSMB4-206ENST00000495288 CFTRP13569 1480 aa29.62■■■□□ 2.33
PSMB4-206ENST00000495288 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
PSMB4-206ENST00000495288 NESP48681 1621 aa29.49■■■□□ 2.31
PSMB4-206ENST00000495288 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
PSMB4-206ENST00000495288 LAMC3Q9Y6N6 1575 aa29.41■■■□□ 2.3
PSMB4-206ENST00000495288 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
PSMB4-206ENST00000495288 WRNQ14191 1432 aaPredicted RBP eCLIP29.32■■■□□ 2.28
PSMB4-206ENST00000495288 FANCD2Q9BXW9 1451 aa29.3■■■□□ 2.28
PSMB4-206ENST00000495288 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
PSMB4-206ENST00000495288 SYNJ1O43426 1573 aa29.16■■■□□ 2.26
PSMB4-206ENST00000495288 CEP164Q9UPV0 1460 aa29.16■■■□□ 2.26
PSMB4-206ENST00000495288 CUX1P39880 1505 aa29.1■■■□□ 2.25
PSMB4-206ENST00000495288 KIF21AQ7Z4S6 1674 aa29.06■■■□□ 2.24
PSMB4-206ENST00000495288 TOP2BQ02880 1626 aa29.05■■■□□ 2.24
PSMB4-206ENST00000495288 FAM9AQ8IZU1 332 aaPredicted RBP29.01■■■□□ 2.23
PSMB4-206ENST00000495288 BIVM-ERCC5R4GMW8 1640 aa29.01■■■□□ 2.23
PSMB4-206ENST00000495288 ERCC6Q03468 1493 aa29■■■□□ 2.23
PSMB4-206ENST00000495288 DNMBPQ6XZF7 1577 aa28.94■■■□□ 2.22
PSMB4-206ENST00000495288 URB2Q14146 1524 aaKnown RBP28.94■■■□□ 2.22
PSMB4-206ENST00000495288 TOPBP1Q92547 1522 aa28.93■■■□□ 2.22
PSMB4-206ENST00000495288 MRC2Q9UBG0 1479 aa28.89■■■□□ 2.22
PSMB4-206ENST00000495288 FGD5Q6ZNL6 1462 aa28.86■■■□□ 2.21
PSMB4-206ENST00000495288 SOGA1O94964 1423 aa28.85■■■□□ 2.21
PSMB4-206ENST00000495288 RUSC2Q8N2Y8 1516 aa28.76■■■□□ 2.19
PSMB4-206ENST00000495288 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
PSMB4-206ENST00000495288 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
PSMB4-206ENST00000495288 EEA1Q15075 1411 aa28.7■■■□□ 2.19
PSMB4-206ENST00000495288 WDR62O43379 1518 aa28.69■■■□□ 2.18
PSMB4-206ENST00000495288 LOC105371045A0A1W2PR82 267 aa28.68■■■□□ 2.18
PSMB4-206ENST00000495288 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
PSMB4-206ENST00000495288 THOC2Q8NI27 1593 aaKnown RBP28.65■■■□□ 2.18
PSMB4-206ENST00000495288 CUX2O14529 1486 aa28.65■■■□□ 2.18
PSMB4-206ENST00000495288 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
PSMB4-206ENST00000495288 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
PSMB4-206ENST00000495288 ABCA10Q8WWZ4 1543 aa28.56■■■□□ 2.16
PSMB4-206ENST00000495288 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
PSMB4-206ENST00000495288 IFT140Q96RY7 1462 aa28.48■■■□□ 2.15
PSMB4-206ENST00000495288 TARBP1Q13395 1621 aaKnown RBP28.48■■■□□ 2.15
PSMB4-206ENST00000495288 IGF1RP08069 1367 aa28.42■■■□□ 2.14
PSMB4-206ENST00000495288 WDR97A6NE52 1622 aa28.42■■■□□ 2.14
PSMB4-206ENST00000495288 GAPVD1Q14C86 1478 aa28.38■■■□□ 2.13
PSMB4-206ENST00000495288 AQRO60306 1485 aaKnown RBP eCLIP28.35■■■□□ 2.135e-8■■■■■ 79.9
PSMB4-206ENST00000495288 UBTFP17480 764 aaKnown RBP28.34■■■□□ 2.13
PSMB4-206ENST00000495288 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
PSMB4-206ENST00000495288 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
PSMB4-206ENST00000495288 GOLGA3Q08378 1498 aa28.3■■■□□ 2.12
PSMB4-206ENST00000495288 KIF21BO75037 1637 aa28.29■■■□□ 2.12
PSMB4-206ENST00000495288 CARMIL1Q5VZK9 1371 aa28.29■■■□□ 2.12
PSMB4-206ENST00000495288 PRXQ9BXM0 1461 aa28.28■■■□□ 2.12
PSMB4-206ENST00000495288 RAPGEF2Q9Y4G8 1499 aa28.26■■■□□ 2.11
PSMB4-206ENST00000495288 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
PSMB4-206ENST00000495288 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
PSMB4-206ENST00000495288 EIF4G3O43432 1585 aaKnown RBP28.17■■■□□ 2.1
PSMB4-206ENST00000495288 TNIKQ9UKE5 1360 aa28.16■■■□□ 2.1
PSMB4-206ENST00000495288 PBRM1Q86U86 1689 aa28.15■■■□□ 2.1
PSMB4-206ENST00000495288 CUL7Q14999 1698 aa28.14■■■□□ 2.1
PSMB4-206ENST00000495288 FHAD1B1AJZ9 1412 aa28.07■■■□□ 2.08
PSMB4-206ENST00000495288 SNAPC4Q5SXM2 1469 aa28.05■■■□□ 2.08
PSMB4-206ENST00000495288 RANGAP1P46060 587 aaPredicted RBP28.04■■■□□ 2.08
PSMB4-206ENST00000495288 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
PSMB4-206ENST00000495288 FBLN2P98095 1184 aa27.98■■■□□ 2.07
PSMB4-206ENST00000495288 MAGI1Q96QZ7 1491 aaPredicted RBP27.97■■■□□ 2.07
PSMB4-206ENST00000495288 CHMP7Q8WUX9 453 aaPredicted RBP27.97■■■□□ 2.07
PSMB4-206ENST00000495288 CEP162Q5TB80 1403 aa27.97■■■□□ 2.07
PSMB4-206ENST00000495288 SYNJ2O15056 1496 aa27.88■■■□□ 2.05
PSMB4-206ENST00000495288 CLIP1P30622 1438 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms