RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 TRIM26Q12899 539 aaPredicted RBP18■□□□□ 0.47
HDLBP-245ENST00000494862 VPS8Q8N3P4 1428 aa17.99■□□□□ 0.47
HDLBP-245ENST00000494862 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
HDLBP-245ENST00000494862 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
HDLBP-245ENST00000494862 FHAD1B1AJZ9 1412 aa17.98■□□□□ 0.47
HDLBP-245ENST00000494862 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
HDLBP-245ENST00000494862 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
HDLBP-245ENST00000494862 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
HDLBP-245ENST00000494862 ADAMTS12P58397 1594 aa17.93■□□□□ 0.46
HDLBP-245ENST00000494862 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
HDLBP-245ENST00000494862 CTTNBP2Q8WZ74 1663 aa17.87■□□□□ 0.45
HDLBP-245ENST00000494862 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
HDLBP-245ENST00000494862 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
HDLBP-245ENST00000494862 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
HDLBP-245ENST00000494862 EFCAB5A4FU69 1503 aa17.84■□□□□ 0.45
HDLBP-245ENST00000494862 APLP2Q06481 763 aa17.83■□□□□ 0.44
HDLBP-245ENST00000494862 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
HDLBP-245ENST00000494862 SYNJ2O15056 1496 aa17.77■□□□□ 0.44
HDLBP-245ENST00000494862 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
HDLBP-245ENST00000494862 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
HDLBP-245ENST00000494862 FHOD3Q2V2M9 1422 aa17.74■□□□□ 0.43
HDLBP-245ENST00000494862 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
HDLBP-245ENST00000494862 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
HDLBP-245ENST00000494862 KIAA0586Q9BVV6 1533 aa17.73■□□□□ 0.43
HDLBP-245ENST00000494862 TTBK1Q5TCY1 1321 aaPredicted RBP17.7■□□□□ 0.42
HDLBP-245ENST00000494862 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
HDLBP-245ENST00000494862 UGGT2Q9NYU1 1516 aa17.69■□□□□ 0.42
HDLBP-245ENST00000494862 FMN1Q68DA7 1419 aa17.69■□□□□ 0.42
HDLBP-245ENST00000494862 NUP160Q12769 1436 aa17.67■□□□□ 0.42
HDLBP-245ENST00000494862 CASKIN1Q8WXD9 1431 aa17.67■□□□□ 0.42
HDLBP-245ENST00000494862 FYCO1Q9BQS8 1478 aa17.65■□□□□ 0.42
HDLBP-245ENST00000494862 FBLN2P98095 1184 aa17.65■□□□□ 0.42
HDLBP-245ENST00000494862 PCF11O94913 1555 aaKnown RBP17.64■□□□□ 0.41
HDLBP-245ENST00000494862 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
HDLBP-245ENST00000494862 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
HDLBP-245ENST00000494862 TIAM1Q13009 1591 aa17.62■□□□□ 0.41
HDLBP-245ENST00000494862 DISP1Q96F81 1524 aa17.57■□□□□ 0.4
HDLBP-245ENST00000494862 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
HDLBP-245ENST00000494862 CFAP43Q8NDM7 1665 aa17.55■□□□□ 0.4
HDLBP-245ENST00000494862 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
HDLBP-245ENST00000494862 JPH4Q96JJ6 628 aa17.55■□□□□ 0.4
HDLBP-245ENST00000494862 LRRC9Q6ZRR7 1453 aa17.55■□□□□ 0.4
HDLBP-245ENST00000494862 HRCP23327 699 aa17.52■□□□□ 0.4
HDLBP-245ENST00000494862 CARMIL2Q6F5E8 1435 aa17.51■□□□□ 0.39
HDLBP-245ENST00000494862 CHD1O14646 1710 aa17.49■□□□□ 0.39
HDLBP-245ENST00000494862 RRBP1Q9P2E9 1410 aaKnown RBP17.47■□□□□ 0.39
HDLBP-245ENST00000494862 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
HDLBP-245ENST00000494862 HECW1Q76N89 1606 aa17.47■□□□□ 0.39
HDLBP-245ENST00000494862 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
HDLBP-245ENST00000494862 EPRSP07814 1512 aaKnown RBP17.42■□□□□ 0.38
HDLBP-245ENST00000494862 MTUS2Q5JR59 1369 aa17.41■□□□□ 0.38
HDLBP-245ENST00000494862 CCNB3Q8WWL7 1395 aa17.41■□□□□ 0.38
HDLBP-245ENST00000494862 LRRIQ1Q96JM4 1722 aa17.41■□□□□ 0.38
HDLBP-245ENST00000494862 PRG4Q92954 1404 aaPredicted RBP17.4■□□□□ 0.38
HDLBP-245ENST00000494862 RAPGEF6Q8TEU7 1601 aa17.39■□□□□ 0.37
HDLBP-245ENST00000494862 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.37
HDLBP-245ENST00000494862 EHBP1L1Q8N3D4 1523 aa17.38■□□□□ 0.37
HDLBP-245ENST00000494862 SHROOM2Q13796 1616 aa17.38■□□□□ 0.37
HDLBP-245ENST00000494862 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
HDLBP-245ENST00000494862 NUP153P49790 1475 aaKnown RBP17.37■□□□□ 0.37
HDLBP-245ENST00000494862 CLASP1Q7Z460 1538 aa17.36■□□□□ 0.37
HDLBP-245ENST00000494862 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
HDLBP-245ENST00000494862 CDK13Q14004 1512 aaKnown RBP17.34■□□□□ 0.37
HDLBP-245ENST00000494862 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.37
HDLBP-245ENST00000494862 ABCA8O94911 1581 aa17.32■□□□□ 0.36
HDLBP-245ENST00000494862 MAGI3Q5TCQ9 1506 aa17.32■□□□□ 0.36
HDLBP-245ENST00000494862 PTPRGP23470 1445 aa17.32■□□□□ 0.36
HDLBP-245ENST00000494862 NCOA2Q15596 1464 aa17.31■□□□□ 0.36
HDLBP-245ENST00000494862 SUPT6HQ7KZ85 1726 aaKnown RBP17.3■□□□□ 0.36
HDLBP-245ENST00000494862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.3■□□□□ 0.36
HDLBP-245ENST00000494862 CDK11AQ9UQ88 783 aaPredicted RBP17.3■□□□□ 0.36
HDLBP-245ENST00000494862 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
HDLBP-245ENST00000494862 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
HDLBP-245ENST00000494862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
HDLBP-245ENST00000494862 MYOM3Q5VTT5 1437 aa17.27■□□□□ 0.35
HDLBP-245ENST00000494862 FGD6Q6ZV73 1430 aa17.27■□□□□ 0.35
HDLBP-245ENST00000494862 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
HDLBP-245ENST00000494862 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
HDLBP-245ENST00000494862 TROQ12816 1431 aaPredicted RBP17.23■□□□□ 0.35
HDLBP-245ENST00000494862 UACAQ9BZF9 1416 aa17.23■□□□□ 0.35
HDLBP-245ENST00000494862 ERCC6L2Q5T890 1561 aa17.23■□□□□ 0.35
HDLBP-245ENST00000494862 ATP10BO94823 1461 aa17.22■□□□□ 0.35
HDLBP-245ENST00000494862 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
HDLBP-245ENST00000494862 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
HDLBP-245ENST00000494862 MAPK8IP2Q13387 824 aaPredicted RBP17.2■□□□□ 0.34
HDLBP-245ENST00000494862 ITGAEP38570 1179 aa17.19■□□□□ 0.34
HDLBP-245ENST00000494862 MIA2Q96PC5 1412 aa17.19■□□□□ 0.34
HDLBP-245ENST00000494862 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
HDLBP-245ENST00000494862 TCOF1Q13428 1488 aaKnown RBP17.17■□□□□ 0.34
HDLBP-245ENST00000494862 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
HDLBP-245ENST00000494862 PTPN23Q9H3S7 1636 aa17.14■□□□□ 0.33
HDLBP-245ENST00000494862 UHRF1BP1LA0JNW5 1464 aa17.14■□□□□ 0.33
HDLBP-245ENST00000494862 ADCY10Q96PN6 1610 aa17.14■□□□□ 0.33
HDLBP-245ENST00000494862 SETD5Q9C0A6 1442 aa17.12■□□□□ 0.33
HDLBP-245ENST00000494862 KCNA4P22459 653 aa17.1■□□□□ 0.33
HDLBP-245ENST00000494862 GPATCH8Q9UKJ3 1502 aaKnown RBP17.08■□□□□ 0.32
HDLBP-245ENST00000494862 KIF14Q15058 1648 aa17.07■□□□□ 0.32
HDLBP-245ENST00000494862 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
HDLBP-245ENST00000494862 ABCC10Q5T3U5 1492 aa17.06■□□□□ 0.32
HDLBP-245ENST00000494862 PTPRKQ15262 1439 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms