RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	EFCAB5	A4FU69	1503 aa		34.56	■■■■□ 3.12
ARHGAP4-223	ENST00000494397	GRIN2B	Q13224	1484 aa		34.55	■■■■□ 3.12
ARHGAP4-223	ENST00000494397	FHAD1	B1AJZ9	1412 aa		34.54	■■■■□ 3.12
ARHGAP4-223	ENST00000494397	ADAMTS12	P58397	1594 aa		34.48	■■■■□ 3.11
ARHGAP4-223	ENST00000494397	ZNF608	Q9ULD9	1512 aa	Predicted RBP	34.47	■■■■□ 3.11
ARHGAP4-223	ENST00000494397	ZEB1	P37275	1124 aa	Predicted RBP	34.4	■■■■□ 3.1
ARHGAP4-223	ENST00000494397	MAP3K1	Q13233	1512 aa		34.4	■■■■□ 3.1
ARHGAP4-223	ENST00000494397	FHOD3	Q2V2M9	1422 aa		34.35	■■■■□ 3.09
ARHGAP4-223	ENST00000494397	EIF4G3	O43432	1585 aa	Known RBP	34.34	■■■■□ 3.09
ARHGAP4-223	ENST00000494397	KANK4	Q5T7N3	995 aa	Predicted RBP	34.33	■■■■□ 3.09
ARHGAP4-223	ENST00000494397	SAMD9	Q5K651	1589 aa		34.32	■■■■□ 3.08
ARHGAP4-223	ENST00000494397	P3H3	Q8IVL6	736 aa		34.29	■■■■□ 3.08
ARHGAP4-223	ENST00000494397	TIAM1	Q13009	1591 aa		34.28	■■■■□ 3.08
ARHGAP4-223	ENST00000494397	FMN1	Q68DA7	1419 aa		34.26	■■■■□ 3.08
ARHGAP4-223	ENST00000494397	SNAPC4	Q5SXM2	1469 aa		34.26	■■■■□ 3.07
ARHGAP4-223	ENST00000494397	PCF11	O94913	1555 aa	Known RBP	34.26	■■■■□ 3.07
ARHGAP4-223	ENST00000494397	FYCO1	Q9BQS8	1478 aa		34.25	■■■■□ 3.07
ARHGAP4-223	ENST00000494397	CASKIN1	Q8WXD9	1431 aa		34.24	■■■■□ 3.07
ARHGAP4-223	ENST00000494397	MAGI1	Q96QZ7	1491 aa	Predicted RBP	34.2	■■■■□ 3.07
ARHGAP4-223	ENST00000494397	IQGAP2	Q13576	1575 aa		34.19	■■■■□ 3.06
ARHGAP4-223	ENST00000494397	CFAP43	Q8NDM7	1665 aa		34.15	■■■■□ 3.06
ARHGAP4-223	ENST00000494397	LRRC9	Q6ZRR7	1453 aa		34.14	■■■■□ 3.06
ARHGAP4-223	ENST00000494397	GRIN2A	Q12879	1464 aa		34.13	■■■■□ 3.05
ARHGAP4-223	ENST00000494397	RRBP1	Q9P2E9	1410 aa	Known RBP	34.12	■■■■□ 3.05
ARHGAP4-223	ENST00000494397	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	34.09	■■■■□ 3.05
ARHGAP4-223	ENST00000494397	KIAA0586	Q9BVV6	1533 aa		34.08	■■■■□ 3.05
ARHGAP4-223	ENST00000494397	SYNJ2	O15056	1496 aa		34.07	■■■■□ 3.04
ARHGAP4-223	ENST00000494397	UGGT2	Q9NYU1	1516 aa		34.06	■■■■□ 3.04
ARHGAP4-223	ENST00000494397	CCER1	Q8TC90	406 aa	Predicted RBP	34.06	■■■■□ 3.04
ARHGAP4-223	ENST00000494397	HNRNPUL2	Q1KMD3	747 aa	Known RBP	34.03	■■■■□ 3.04
ARHGAP4-223	ENST00000494397	ATP1B4	Q9UN42	357 aa	Predicted RBP	34	■■■■□ 3.03
ARHGAP4-223	ENST00000494397	CCNB3	Q8WWL7	1395 aa		33.97	■■■■□ 3.03
ARHGAP4-223	ENST00000494397	CHMP7	Q8WUX9	453 aa	Predicted RBP	33.96	■■■■□ 3.03
ARHGAP4-223	ENST00000494397	NUP160	Q12769	1436 aa		33.87	■■■■□ 3.01
ARHGAP4-223	ENST00000494397	CEP170	Q5SW79	1584 aa		33.87	■■■■□ 3.01
ARHGAP4-223	ENST00000494397	PHLDB1	Q86UU1	1377 aa		33.85	■■■■□ 3.01
ARHGAP4-223	ENST00000494397	DISP1	Q96F81	1524 aa		33.84	■■■■□ 3.01
ARHGAP4-223	ENST00000494397	KIAA0556	O60303	1618 aa		33.84	■■■■□ 3.01
ARHGAP4-223	ENST00000494397	CCDC18	Q5T9S5	1454 aa		33.83	■■■■□ 3.01
ARHGAP4-223	ENST00000494397	HECW1	Q76N89	1606 aa		33.81	■■■■□ 3
ARHGAP4-223	ENST00000494397	FBLN2	P98095	1184 aa		33.79	■■■■□ 3
ARHGAP4-223	ENST00000494397	MTUS2	Q5JR59	1369 aa		33.77	■■■■□ 3
ARHGAP4-223	ENST00000494397	LRRIQ1	Q96JM4	1722 aa		33.77	■■■■□ 3
ARHGAP4-223	ENST00000494397	EHBP1L1	Q8N3D4	1523 aa		33.72	■■■□□ 2.99
ARHGAP4-223	ENST00000494397	EPRS	P07814	1512 aa	Known RBP	33.69	■■■□□ 2.98
ARHGAP4-223	ENST00000494397	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.68	■■■□□ 2.98	3e-7	■■■■□ 22
ARHGAP4-223	ENST00000494397	CARMIL2	Q6F5E8	1435 aa		33.64	■■■□□ 2.98
ARHGAP4-223	ENST00000494397	JPH4	Q96JJ6	628 aa		33.62	■■■□□ 2.97
ARHGAP4-223	ENST00000494397	NCOA2	Q15596	1464 aa		33.61	■■■□□ 2.97
ARHGAP4-223	ENST00000494397	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.6	■■■□□ 2.97
ARHGAP4-223	ENST00000494397	FGD6	Q6ZV73	1430 aa		33.59	■■■□□ 2.97
ARHGAP4-223	ENST00000494397	MAGI3	Q5TCQ9	1506 aa		33.58	■■■□□ 2.97
ARHGAP4-223	ENST00000494397	ARHGEF11	O15085	1522 aa		33.57	■■■□□ 2.96
ARHGAP4-223	ENST00000494397	RAPGEF6	Q8TEU7	1601 aa		33.56	■■■□□ 2.96
ARHGAP4-223	ENST00000494397	FAM50A	Q14320	339 aa	Known RBP	33.55	■■■□□ 2.96
ARHGAP4-223	ENST00000494397	CDK13	Q14004	1512 aa	Known RBP	33.53	■■■□□ 2.96
ARHGAP4-223	ENST00000494397	ITGAE	P38570	1179 aa		33.53	■■■□□ 2.96
ARHGAP4-223	ENST00000494397	MYOM3	Q5VTT5	1437 aa		33.53	■■■□□ 2.96
ARHGAP4-223	ENST00000494397	NUP153	P49790	1475 aa	Known RBP	33.53	■■■□□ 2.96
ARHGAP4-223	ENST00000494397	CLSPN	Q9HAW4	1339 aa		33.48	■■■□□ 2.95
ARHGAP4-223	ENST00000494397	DHX57	Q6P158	1386 aa	Known RBP	33.46	■■■□□ 2.95
ARHGAP4-223	ENST00000494397	CHD1	O14646	1710 aa		33.44	■■■□□ 2.94
ARHGAP4-223	ENST00000494397	SETD5	Q9C0A6	1442 aa		33.41	■■■□□ 2.94
ARHGAP4-223	ENST00000494397	PLB1	Q6P1J6	1458 aa		33.4	■■■□□ 2.94
ARHGAP4-223	ENST00000494397	RAB3GAP2	Q9H2M9	1393 aa		33.38	■■■□□ 2.93
ARHGAP4-223	ENST00000494397	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.38	■■■□□ 2.93
ARHGAP4-223	ENST00000494397	PRG4	Q92954	1404 aa	Predicted RBP	33.36	■■■□□ 2.93
ARHGAP4-223	ENST00000494397	ARID3C	A6NKF2	412 aa		33.35	■■■□□ 2.93
ARHGAP4-223	ENST00000494397	TCOF1	Q13428	1488 aa	Known RBP	33.33	■■■□□ 2.93
ARHGAP4-223	ENST00000494397	ABCA8	O94911	1581 aa		33.33	■■■□□ 2.93
ARHGAP4-223	ENST00000494397	MIA2	Q96PC5	1412 aa		33.32	■■■□□ 2.93
ARHGAP4-223	ENST00000494397	PTPN23	Q9H3S7	1636 aa		33.32	■■■□□ 2.92
ARHGAP4-223	ENST00000494397	SHROOM2	Q13796	1616 aa		33.3	■■■□□ 2.92
ARHGAP4-223	ENST00000494397	TRO	Q12816	1431 aa	Predicted RBP	33.27	■■■□□ 2.92
ARHGAP4-223	ENST00000494397	PTPRG	P23470	1445 aa		33.23	■■■□□ 2.91
ARHGAP4-223	ENST00000494397	PTPRK	Q15262	1439 aa		33.21	■■■□□ 2.91
ARHGAP4-223	ENST00000494397	HFM1	A2PYH4	1435 aa		33.18	■■■□□ 2.9
ARHGAP4-223	ENST00000494397	CLASP1	Q7Z460	1538 aa		33.15	■■■□□ 2.9
ARHGAP4-223	ENST00000494397	ADCY10	Q96PN6	1610 aa		33.14	■■■□□ 2.9
ARHGAP4-223	ENST00000494397	ATP10B	O94823	1461 aa		33.13	■■■□□ 2.89
ARHGAP4-223	ENST00000494397	AKNA	Q7Z591	1439 aa		33.07	■■■□□ 2.88
ARHGAP4-223	ENST00000494397	MAPKBP1	O60336	1514 aa		33.07	■■■□□ 2.88
ARHGAP4-223	ENST00000494397	NAIP	Q13075	1403 aa		33.06	■■■□□ 2.88
ARHGAP4-223	ENST00000494397	UACA	Q9BZF9	1416 aa		33.06	■■■□□ 2.88
ARHGAP4-223	ENST00000494397	PLEKHD1	A6NEE1	506 aa		33.06	■■■□□ 2.88
ARHGAP4-223	ENST00000494397	KIF14	Q15058	1648 aa		33.02	■■■□□ 2.88
ARHGAP4-223	ENST00000494397	ITSN2	Q9NZM3	1697 aa		33.01	■■■□□ 2.87
ARHGAP4-223	ENST00000494397	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33	■■■□□ 2.87
ARHGAP4-223	ENST00000494397	ERCC6L2	Q5T890	1561 aa		32.99	■■■□□ 2.87
ARHGAP4-223	ENST00000494397	DAPK1	P53355	1430 aa		32.95	■■■□□ 2.87
ARHGAP4-223	ENST00000494397	ABCC10	Q5T3U5	1492 aa		32.94	■■■□□ 2.86
ARHGAP4-223	ENST00000494397	DNMT1	P26358	1616 aa	Known RBP	32.94	■■■□□ 2.86
ARHGAP4-223	ENST00000494397	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.93	■■■□□ 2.86
ARHGAP4-223	ENST00000494397	ABCC2	Q92887	1545 aa		32.93	■■■□□ 2.86
ARHGAP4-223	ENST00000494397	GCC2	Q8IWJ2	1684 aa		32.92	■■■□□ 2.86
ARHGAP4-223	ENST00000494397	ROCK1	Q13464	1354 aa		32.92	■■■□□ 2.86
ARHGAP4-223	ENST00000494397	ABCC5	O15440	1437 aa		32.91	■■■□□ 2.86
ARHGAP4-223	ENST00000494397	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.9	■■■□□ 2.86
ARHGAP4-223	ENST00000494397	CAMSAP2	Q08AD1	1489 aa		32.9	■■■□□ 2.86
ARHGAP4-223	ENST00000494397	ZNF644	Q9H582	1327 aa	Predicted RBP	32.89	■■■□□ 2.86

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