RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 FHAD1B1AJZ9 1412 aa10.49□□□□□ -0.73
A1CF-210ENST00000493415 PRG4Q92954 1404 aaPredicted RBP10.49□□□□□ -0.73
A1CF-210ENST00000493415 WRNQ14191 1432 aaPredicted RBP eCLIP10.48□□□□□ -0.73
A1CF-210ENST00000493415 DIP2BQ9P265 1576 aa10.48□□□□□ -0.73
A1CF-210ENST00000493415 NPM1P06748 294 aaKnown RBP eCLIP10.47□□□□□ -0.73
A1CF-210ENST00000493415 BIVM-ERCC5R4GMW8 1640 aa10.47□□□□□ -0.73
A1CF-210ENST00000493415 ABCC10Q5T3U5 1492 aa10.46□□□□□ -0.74
A1CF-210ENST00000493415 ERICH3Q5RHP9 1530 aa10.45□□□□□ -0.74
A1CF-210ENST00000493415 RUSC2Q8N2Y8 1516 aa10.45□□□□□ -0.74
A1CF-210ENST00000493415 MAPKBP1O60336 1514 aa10.44□□□□□ -0.74
A1CF-210ENST00000493415 ILDR1Q86SU0 546 aaPredicted RBP10.44□□□□□ -0.74
A1CF-210ENST00000493415 TOP2BQ02880 1626 aa10.44□□□□□ -0.74
A1CF-210ENST00000493415 ADCY10Q96PN6 1610 aa10.44□□□□□ -0.74
A1CF-210ENST00000493415 FOXD1Q16676 465 aa10.42□□□□□ -0.74
A1CF-210ENST00000493415 KDM4FA0A1W2PPD8 638 aa10.4□□□□□ -0.74
A1CF-210ENST00000493415 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
A1CF-210ENST00000493415 TTBK1Q5TCY1 1321 aaPredicted RBP10.35□□□□□ -0.75
A1CF-210ENST00000493415 ADGRL1O94910 1474 aa10.35□□□□□ -0.75
A1CF-210ENST00000493415 SUPT5HO00267 1087 aaKnown RBP10.34□□□□□ -0.75
A1CF-210ENST00000493415 CUL7Q14999 1698 aa10.32□□□□□ -0.76
A1CF-210ENST00000493415 HECW2Q9P2P5 1572 aa10.32□□□□□ -0.76
A1CF-210ENST00000493415 PPRC1Q5VV67 1664 aaKnown RBP10.31□□□□□ -0.76
A1CF-210ENST00000493415 KIAA0586Q9BVV6 1533 aa10.29□□□□□ -0.76
A1CF-210ENST00000493415 PTPRGP23470 1445 aa10.27□□□□□ -0.77
A1CF-210ENST00000493415 ASXL2Q76L83 1435 aa10.26□□□□□ -0.77
A1CF-210ENST00000493415 ABCC2Q92887 1545 aa10.26□□□□□ -0.77
A1CF-210ENST00000493415 GLI2P10070 1586 aa10.26□□□□□ -0.77
A1CF-210ENST00000493415 PLB1Q6P1J6 1458 aa10.25□□□□□ -0.77
A1CF-210ENST00000493415 CARMIL2Q6F5E8 1435 aa10.24□□□□□ -0.77
A1CF-210ENST00000493415 TEX14Q8IWB6 1497 aa10.23□□□□□ -0.77
A1CF-210ENST00000493415 MAP3K4Q9Y6R4 1608 aa10.23□□□□□ -0.77
A1CF-210ENST00000493415 TNIKQ9UKE5 1360 aa10.23□□□□□ -0.77
A1CF-210ENST00000493415 IQGAP2Q13576 1575 aa10.22□□□□□ -0.77
A1CF-210ENST00000493415 KIF27Q86VH2 1401 aa10.22□□□□□ -0.77
A1CF-210ENST00000493415 ZCCHC11Q5TAX3 1644 aaKnown RBP10.21□□□□□ -0.78
A1CF-210ENST00000493415 EPRSP07814 1512 aaKnown RBP10.19□□□□□ -0.78
A1CF-210ENST00000493415 COL17A1Q9UMD9 1497 aaPredicted RBP10.18□□□□□ -0.78
A1CF-210ENST00000493415 UACAQ9BZF9 1416 aa10.18□□□□□ -0.78
A1CF-210ENST00000493415 UHRF1BP1LA0JNW5 1464 aa10.17□□□□□ -0.78
A1CF-210ENST00000493415 IGF1RP08069 1367 aa10.17□□□□□ -0.78
A1CF-210ENST00000493415 KIF21BO75037 1637 aa10.17□□□□□ -0.78
A1CF-210ENST00000493415 CARMIL1Q5VZK9 1371 aa10.15□□□□□ -0.78
A1CF-210ENST00000493415 KDM5BQ9UGL1 1544 aa10.14□□□□□ -0.79
A1CF-210ENST00000493415 CFAP43Q8NDM7 1665 aa10.14□□□□□ -0.79
A1CF-210ENST00000493415 KIAA0556O60303 1618 aa10.14□□□□□ -0.79
A1CF-210ENST00000493415 PPP6R1Q9UPN7 881 aa10.13□□□□□ -0.79
A1CF-210ENST00000493415 DISP1Q96F81 1524 aa10.12□□□□□ -0.79
A1CF-210ENST00000493415 WDR7Q9Y4E6 1490 aa10.12□□□□□ -0.79
A1CF-210ENST00000493415 ADRA2BP18089 450 aa10.12□□□□□ -0.79
A1CF-210ENST00000493415 FBXO41Q8TF61 875 aa10.12□□□□□ -0.79
A1CF-210ENST00000493415 CTTNBP2Q8WZ74 1663 aa10.09□□□□□ -0.79
A1CF-210ENST00000493415 CD109Q6YHK3 1445 aa10.08□□□□□ -0.8
A1CF-210ENST00000493415 UGGT2Q9NYU1 1516 aa10.08□□□□□ -0.8
A1CF-210ENST00000493415 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
A1CF-210ENST00000493415 MAGI3Q5TCQ9 1506 aa10.07□□□□□ -0.8
A1CF-210ENST00000493415 RAPGEF2Q9Y4G8 1499 aa10.05□□□□□ -0.8
A1CF-210ENST00000493415 ADAMTSL3P82987 1691 aa10.03□□□□□ -0.8
A1CF-210ENST00000493415 PTPRMP28827 1452 aa10.03□□□□□ -0.8
A1CF-210ENST00000493415 PCF11O94913 1555 aaKnown RBP10.02□□□□□ -0.81
A1CF-210ENST00000493415 MADDQ8WXG6 1647 aa10.02□□□□□ -0.81
A1CF-210ENST00000493415 RIMS1Q86UR5 1692 aaKnown RBP10.02□□□□□ -0.81
A1CF-210ENST00000493415 BCORL1Q5H9F3 1711 aa10.02□□□□□ -0.81
A1CF-210ENST00000493415 ABCA8O94911 1581 aa10.01□□□□□ -0.81
A1CF-210ENST00000493415 ARID3CA6NKF2 412 aa10.01□□□□□ -0.81
A1CF-210ENST00000493415 GOLGA3Q08378 1498 aa10.01□□□□□ -0.81
A1CF-210ENST00000493415 LMTK3Q96Q04 1460 aa10.01□□□□□ -0.81
A1CF-210ENST00000493415 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
A1CF-210ENST00000493415 ARAP3Q8WWN8 1544 aa9.98□□□□□ -0.81
A1CF-210ENST00000493415 ABCA9Q8IUA7 1624 aa9.96□□□□□ -0.81
A1CF-210ENST00000493415 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.82
A1CF-210ENST00000493415 FRMPD1Q5SYB0 1578 aa9.94□□□□□ -0.82
A1CF-210ENST00000493415 ARHGEF40Q8TER5 1519 aa9.94□□□□□ -0.82
A1CF-210ENST00000493415 RAPGEF3O95398 923 aa9.94□□□□□ -0.82
A1CF-210ENST00000493415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.93□□□□□ -0.82
A1CF-210ENST00000493415 HNRNPUL2Q1KMD3 747 aaKnown RBP9.93□□□□□ -0.82
A1CF-210ENST00000493415 HSPA2P54652 639 aa9.92□□□□□ -0.82
A1CF-210ENST00000493415 FER1L4A9Z1Z3 1794 aa9.92□□□□□ -0.82
A1CF-210ENST00000493415 NEO1Q92859 1461 aa9.91□□□□□ -0.82
A1CF-210ENST00000493415 PHLDB1Q86UU1 1377 aa9.91□□□□□ -0.82
A1CF-210ENST00000493415 DISP3Q9P2K9 1392 aa9.91□□□□□ -0.82
A1CF-210ENST00000493415 P3H3Q8IVL6 736 aa9.91□□□□□ -0.82
A1CF-210ENST00000493415 RAPGEF6Q8TEU7 1601 aa9.91□□□□□ -0.82
A1CF-210ENST00000493415 CFAP74Q9C0B2 1584 aa9.9□□□□□ -0.82
A1CF-210ENST00000493415 ATP10BO94823 1461 aa9.9□□□□□ -0.83
A1CF-210ENST00000493415 RICTORQ6R327 1708 aa9.9□□□□□ -0.83
A1CF-210ENST00000493415 FANCAO15360 1455 aa9.89□□□□□ -0.83
A1CF-210ENST00000493415 POGZQ7Z3K3 1410 aa9.89□□□□□ -0.83
A1CF-210ENST00000493415 CERKQ8TCT0 537 aa9.88□□□□□ -0.83
A1CF-210ENST00000493415 DENND4BO75064 1496 aaPredicted RBP9.87□□□□□ -0.83
A1CF-210ENST00000493415 SPATA31D1Q6ZQQ2 1576 aa9.87□□□□□ -0.83
A1CF-210ENST00000493415 EFCAB5A4FU69 1503 aa9.87□□□□□ -0.83
A1CF-210ENST00000493415 ZFYVE16Q7Z3T8 1539 aa9.87□□□□□ -0.83
A1CF-210ENST00000493415 MLECQ14165 292 aa9.86□□□□□ -0.83
A1CF-210ENST00000493415 AKNAQ7Z591 1439 aa9.86□□□□□ -0.83
A1CF-210ENST00000493415 PIAS4Q8N2W9 510 aaPredicted RBP9.86□□□□□ -0.83
A1CF-210ENST00000493415 PREX1Q8TCU6 1659 aa9.86□□□□□ -0.83
A1CF-210ENST00000493415 SIGLEC1Q9BZZ2 1709 aa9.85□□□□□ -0.83
A1CF-210ENST00000493415 SAMD9Q5K651 1589 aa9.84□□□□□ -0.83
A1CF-210ENST00000493415 TTC37Q6PGP7 1564 aa9.84□□□□□ -0.83
A1CF-210ENST00000493415 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms