RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 KIAA0586Q9BVV6 1533 aa18.01■□□□□ 0.47
CDC42SE1-206ENST00000492796 RAPGEF2Q9Y4G8 1499 aa18■□□□□ 0.47
CDC42SE1-206ENST00000492796 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
CDC42SE1-206ENST00000492796 ERCC6L2Q5T890 1561 aa17.98■□□□□ 0.47
CDC42SE1-206ENST00000492796 EEA1Q15075 1411 aa17.95■□□□□ 0.46
CDC42SE1-206ENST00000492796 JPH4Q96JJ6 628 aa17.94■□□□□ 0.46
CDC42SE1-206ENST00000492796 PRG4Q92954 1404 aaPredicted RBP17.94■□□□□ 0.46
CDC42SE1-206ENST00000492796 IQGAP2Q13576 1575 aa17.93■□□□□ 0.46
CDC42SE1-206ENST00000492796 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
CDC42SE1-206ENST00000492796 CTTNBP2Q8WZ74 1663 aa17.9■□□□□ 0.46
CDC42SE1-206ENST00000492796 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
CDC42SE1-206ENST00000492796 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
CDC42SE1-206ENST00000492796 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
CDC42SE1-206ENST00000492796 KIF21BO75037 1637 aa17.78■□□□□ 0.44
CDC42SE1-206ENST00000492796 DISP1Q96F81 1524 aa17.77■□□□□ 0.44
CDC42SE1-206ENST00000492796 KIAA0556O60303 1618 aa17.76■□□□□ 0.43
CDC42SE1-206ENST00000492796 TNIKQ9UKE5 1360 aa17.75■□□□□ 0.43
CDC42SE1-206ENST00000492796 GOLGA3Q08378 1498 aa17.73■□□□□ 0.43
CDC42SE1-206ENST00000492796 FAM9AQ8IZU1 332 aaPredicted RBP17.72■□□□□ 0.43
CDC42SE1-206ENST00000492796 ADCY10Q96PN6 1610 aa17.72■□□□□ 0.43
CDC42SE1-206ENST00000492796 PTPRGP23470 1445 aa17.72■□□□□ 0.43
CDC42SE1-206ENST00000492796 SAMD9Q5K651 1589 aa17.65■□□□□ 0.42
CDC42SE1-206ENST00000492796 UHRF1BP1LA0JNW5 1464 aa17.64■□□□□ 0.41
CDC42SE1-206ENST00000492796 MAPKBP1O60336 1514 aa17.64■□□□□ 0.41
CDC42SE1-206ENST00000492796 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
CDC42SE1-206ENST00000492796 ABCC2Q92887 1545 aa17.62■□□□□ 0.41
CDC42SE1-206ENST00000492796 UACAQ9BZF9 1416 aa17.62■□□□□ 0.41
CDC42SE1-206ENST00000492796 NPM1P06748 294 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDC42SE1-206ENST00000492796 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
CDC42SE1-206ENST00000492796 EFCAB5A4FU69 1503 aa17.57■□□□□ 0.4
CDC42SE1-206ENST00000492796 ABCA8O94911 1581 aa17.56■□□□□ 0.4
CDC42SE1-206ENST00000492796 KIF13AQ9H1H9 1805 aa17.56■□□□□ 0.4
CDC42SE1-206ENST00000492796 KDM5BQ9UGL1 1544 aa17.54■□□□□ 0.4
CDC42SE1-206ENST00000492796 PLB1Q6P1J6 1458 aa17.53■□□□□ 0.4
CDC42SE1-206ENST00000492796 ZCCHC11Q5TAX3 1644 aaKnown RBP17.53■□□□□ 0.4
CDC42SE1-206ENST00000492796 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
CDC42SE1-206ENST00000492796 ABCC10Q5T3U5 1492 aa17.52■□□□□ 0.4
CDC42SE1-206ENST00000492796 UBTFP17480 764 aaKnown RBP17.51■□□□□ 0.39
CDC42SE1-206ENST00000492796 ASXL2Q76L83 1435 aa17.47■□□□□ 0.39
CDC42SE1-206ENST00000492796 P3H3Q8IVL6 736 aa17.47■□□□□ 0.39
CDC42SE1-206ENST00000492796 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
CDC42SE1-206ENST00000492796 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
CDC42SE1-206ENST00000492796 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
CDC42SE1-206ENST00000492796 RANGAP1P46060 587 aaPredicted RBP17.45■□□□□ 0.38
CDC42SE1-206ENST00000492796 GLI2P10070 1586 aa17.43■□□□□ 0.38
CDC42SE1-206ENST00000492796 FAM69CQ0P6D2 419 aa17.42■□□□□ 0.38
CDC42SE1-206ENST00000492796 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
CDC42SE1-206ENST00000492796 WDR7Q9Y4E6 1490 aa17.41■□□□□ 0.38
CDC42SE1-206ENST00000492796 EPRSP07814 1512 aaKnown RBP17.39■□□□□ 0.37
CDC42SE1-206ENST00000492796 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
CDC42SE1-206ENST00000492796 NUP153P49790 1475 aaKnown RBP17.37■□□□□ 0.37
CDC42SE1-206ENST00000492796 ATP10BO94823 1461 aa17.37■□□□□ 0.37
CDC42SE1-206ENST00000492796 MAP3K4Q9Y6R4 1608 aa17.35■□□□□ 0.37
CDC42SE1-206ENST00000492796 TSPOAP1O95153 1857 aa17.33■□□□□ 0.37
CDC42SE1-206ENST00000492796 HECW1Q76N89 1606 aa17.33■□□□□ 0.37
CDC42SE1-206ENST00000492796 CFAP43Q8NDM7 1665 aa17.32■□□□□ 0.36
CDC42SE1-206ENST00000492796 PPRC1Q5VV67 1664 aaKnown RBP17.31■□□□□ 0.36
CDC42SE1-206ENST00000492796 CLIP1P30622 1438 aa17.3■□□□□ 0.36
CDC42SE1-206ENST00000492796 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
CDC42SE1-206ENST00000492796 TEX14Q8IWB6 1497 aa17.26■□□□□ 0.35
CDC42SE1-206ENST00000492796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
CDC42SE1-206ENST00000492796 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
CDC42SE1-206ENST00000492796 KDM6BO15054 1643 aa17.25■□□□□ 0.35
CDC42SE1-206ENST00000492796 ABCA9Q8IUA7 1624 aa17.25■□□□□ 0.35
CDC42SE1-206ENST00000492796 CDK13Q14004 1512 aaKnown RBP17.24■□□□□ 0.35
CDC42SE1-206ENST00000492796 PCF11O94913 1555 aaKnown RBP17.23■□□□□ 0.35
CDC42SE1-206ENST00000492796 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
CDC42SE1-206ENST00000492796 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
CDC42SE1-206ENST00000492796 CD109Q6YHK3 1445 aa17.21■□□□□ 0.35
CDC42SE1-206ENST00000492796 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.35
CDC42SE1-206ENST00000492796 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
CDC42SE1-206ENST00000492796 CEP162Q5TB80 1403 aa17.21■□□□□ 0.34
CDC42SE1-206ENST00000492796 FYCO1Q9BQS8 1478 aa17.2■□□□□ 0.34
CDC42SE1-206ENST00000492796 PLEKHD1A6NEE1 506 aa17.2■□□□□ 0.34
CDC42SE1-206ENST00000492796 CCDC18Q5T9S5 1454 aa17.19■□□□□ 0.34
CDC42SE1-206ENST00000492796 ATP1B4Q9UN42 357 aaPredicted RBP17.16■□□□□ 0.34
CDC42SE1-206ENST00000492796 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
CDC42SE1-206ENST00000492796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.14■□□□□ 0.334e-7■■□□□ 13.5
CDC42SE1-206ENST00000492796 TTC37Q6PGP7 1564 aa17.12■□□□□ 0.33
CDC42SE1-206ENST00000492796 KIF14Q15058 1648 aa17.12■□□□□ 0.33
CDC42SE1-206ENST00000492796 LOC105371045A0A1W2PR82 267 aa17.11■□□□□ 0.33
CDC42SE1-206ENST00000492796 TROQ12816 1431 aaPredicted RBP17.11■□□□□ 0.33
CDC42SE1-206ENST00000492796 CFAP74Q9C0B2 1584 aa17.11■□□□□ 0.33
CDC42SE1-206ENST00000492796 PHLDB1Q86UU1 1377 aa17.1■□□□□ 0.33
CDC42SE1-206ENST00000492796 NEO1Q92859 1461 aa17.1■□□□□ 0.33
CDC42SE1-206ENST00000492796 COL17A1Q9UMD9 1497 aaPredicted RBP17.08■□□□□ 0.32
CDC42SE1-206ENST00000492796 ARAP3Q8WWN8 1544 aa17.07■□□□□ 0.32
CDC42SE1-206ENST00000492796 MYO5CQ9NQX4 1742 aa17.07■□□□□ 0.32
CDC42SE1-206ENST00000492796 FANCAO15360 1455 aa17.03■□□□□ 0.32
CDC42SE1-206ENST00000492796 VPS8Q8N3P4 1428 aa17.03■□□□□ 0.32
CDC42SE1-206ENST00000492796 PLCH2O75038 1416 aa17.02■□□□□ 0.31
CDC42SE1-206ENST00000492796 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
CDC42SE1-206ENST00000492796 AKNAQ7Z591 1439 aa16.98■□□□□ 0.31
CDC42SE1-206ENST00000492796 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
CDC42SE1-206ENST00000492796 FRMPD1Q5SYB0 1578 aa16.97■□□□□ 0.31
CDC42SE1-206ENST00000492796 RICTORQ6R327 1708 aa16.96■□□□□ 0.31
CDC42SE1-206ENST00000492796 CDC42BPAQ5VT25 1732 aa16.96■□□□□ 0.3
CDC42SE1-206ENST00000492796 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.3
CDC42SE1-206ENST00000492796 ARHGAP5Q13017 1502 aa16.96■□□□□ 0.3
CDC42SE1-206ENST00000492796 TIAM1Q13009 1591 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms