RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 KIF27Q86VH2 1401 aa15□□□□□ -0.01
GABRE-211ENST00000491339 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
GABRE-211ENST00000491339 SHROOM2Q13796 1616 aa14.98□□□□□ -0.01
GABRE-211ENST00000491339 RUSC2Q8N2Y8 1516 aa14.96□□□□□ -0.01
GABRE-211ENST00000491339 ERCC6L2Q5T890 1561 aa14.89□□□□□ -0.03
GABRE-211ENST00000491339 IGF1RP08069 1367 aa14.87□□□□□ -0.03
GABRE-211ENST00000491339 PRG4Q92954 1404 aaPredicted RBP14.83□□□□□ -0.03
GABRE-211ENST00000491339 KIAA0586Q9BVV6 1533 aa14.83□□□□□ -0.04
GABRE-211ENST00000491339 CARMIL1Q5VZK9 1371 aa14.82□□□□□ -0.04
GABRE-211ENST00000491339 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
GABRE-211ENST00000491339 IQGAP2Q13576 1575 aa14.79□□□□□ -0.04
GABRE-211ENST00000491339 JPH4Q96JJ6 628 aa14.78□□□□□ -0.04
GABRE-211ENST00000491339 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
GABRE-211ENST00000491339 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
GABRE-211ENST00000491339 CARMIL2Q6F5E8 1435 aa14.71□□□□□ -0.05
GABRE-211ENST00000491339 ADCY10Q96PN6 1610 aa14.69□□□□□ -0.06
GABRE-211ENST00000491339 KIF13AQ9H1H9 1805 aa14.66□□□□□ -0.06
GABRE-211ENST00000491339 UGGT2Q9NYU1 1516 aa14.66□□□□□ -0.06
GABRE-211ENST00000491339 KIAA0556O60303 1618 aa14.65□□□□□ -0.06
GABRE-211ENST00000491339 MAPKBP1O60336 1514 aa14.65□□□□□ -0.06
GABRE-211ENST00000491339 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
GABRE-211ENST00000491339 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
GABRE-211ENST00000491339 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
GABRE-211ENST00000491339 PTPRGP23470 1445 aa14.62□□□□□ -0.07
GABRE-211ENST00000491339 EEA1Q15075 1411 aa14.62□□□□□ -0.07
GABRE-211ENST00000491339 DISP1Q96F81 1524 aa14.62□□□□□ -0.07
GABRE-211ENST00000491339 GOLGA3Q08378 1498 aa14.6□□□□□ -0.07
GABRE-211ENST00000491339 DIP2BQ9P265 1576 aa14.58□□□□□ -0.07
GABRE-211ENST00000491339 ABCC2Q92887 1545 aa14.57□□□□□ -0.08
GABRE-211ENST00000491339 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
GABRE-211ENST00000491339 UHRF1BP1LA0JNW5 1464 aa14.56□□□□□ -0.08
GABRE-211ENST00000491339 ABCC10Q5T3U5 1492 aa14.56□□□□□ -0.08
GABRE-211ENST00000491339 UACAQ9BZF9 1416 aa14.54□□□□□ -0.08
GABRE-211ENST00000491339 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.09
GABRE-211ENST00000491339 KIF21BO75037 1637 aa14.52□□□□□ -0.09
GABRE-211ENST00000491339 ZCCHC11Q5TAX3 1644 aaKnown RBP14.52□□□□□ -0.09
GABRE-211ENST00000491339 TSPOAP1O95153 1857 aa14.5□□□□□ -0.09
GABRE-211ENST00000491339 PLB1Q6P1J6 1458 aa14.49□□□□□ -0.09
GABRE-211ENST00000491339 SAMD9Q5K651 1589 aa14.48□□□□□ -0.09
GABRE-211ENST00000491339 KDM5BQ9UGL1 1544 aa14.48□□□□□ -0.09
GABRE-211ENST00000491339 FAM69CQ0P6D2 419 aa14.48□□□□□ -0.09
GABRE-211ENST00000491339 ASXL2Q76L83 1435 aa14.46□□□□□ -0.09
GABRE-211ENST00000491339 ABCA8O94911 1581 aa14.46□□□□□ -0.09
GABRE-211ENST00000491339 FAM9AQ8IZU1 332 aaPredicted RBP14.45□□□□□ -0.1
GABRE-211ENST00000491339 GLI2P10070 1586 aa14.45□□□□□ -0.1
GABRE-211ENST00000491339 KDM6BO15054 1643 aa14.43□□□□□ -0.1
GABRE-211ENST00000491339 EFCAB5A4FU69 1503 aa14.41□□□□□ -0.1
GABRE-211ENST00000491339 MAP3K4Q9Y6R4 1608 aa14.41□□□□□ -0.1
GABRE-211ENST00000491339 WDR7Q9Y4E6 1490 aa14.4□□□□□ -0.1
GABRE-211ENST00000491339 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
GABRE-211ENST00000491339 RAPGEF6Q8TEU7 1601 aa14.4□□□□□ -0.1
GABRE-211ENST00000491339 PPRC1Q5VV67 1664 aaKnown RBP14.39□□□□□ -0.11
GABRE-211ENST00000491339 EPRSP07814 1512 aaKnown RBP14.39□□□□□ -0.11
GABRE-211ENST00000491339 CFAP43Q8NDM7 1665 aa14.37□□□□□ -0.11
GABRE-211ENST00000491339 TEX14Q8IWB6 1497 aa14.35□□□□□ -0.11
GABRE-211ENST00000491339 P3H3Q8IVL6 736 aa14.34□□□□□ -0.11
GABRE-211ENST00000491339 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
GABRE-211ENST00000491339 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
GABRE-211ENST00000491339 UBTFP17480 764 aaKnown RBP14.28□□□□□ -0.12
GABRE-211ENST00000491339 ATP10BO94823 1461 aa14.27□□□□□ -0.12
GABRE-211ENST00000491339 NUP153P49790 1475 aaKnown RBP14.27□□□□□ -0.13
GABRE-211ENST00000491339 ABCA9Q8IUA7 1624 aa14.26□□□□□ -0.13
GABRE-211ENST00000491339 HECW1Q76N89 1606 aa14.26□□□□□ -0.13
GABRE-211ENST00000491339 MAGI3Q5TCQ9 1506 aa14.26□□□□□ -0.13
GABRE-211ENST00000491339 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
GABRE-211ENST00000491339 ARID3CA6NKF2 412 aa14.24□□□□□ -0.13
GABRE-211ENST00000491339 EHMT2Q96KQ7 1210 aa14.24□□□□□ -0.13
GABRE-211ENST00000491339 FMN1Q68DA7 1419 aa14.23□□□□□ -0.13
GABRE-211ENST00000491339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
GABRE-211ENST00000491339 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
GABRE-211ENST00000491339 KCNH8Q96L42 1107 aa14.22□□□□□ -0.13
GABRE-211ENST00000491339 ARHGAP35Q9NRY4 1499 aa14.21□□□□□ -0.13
GABRE-211ENST00000491339 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
GABRE-211ENST00000491339 CDK13Q14004 1512 aaKnown RBP14.16□□□□□ -0.14
GABRE-211ENST00000491339 COL17A1Q9UMD9 1497 aaPredicted RBP14.14□□□□□ -0.15
GABRE-211ENST00000491339 PCF11O94913 1555 aaKnown RBP14.14□□□□□ -0.15
GABRE-211ENST00000491339 NEO1Q92859 1461 aa14.13□□□□□ -0.15
GABRE-211ENST00000491339 ARAP3Q8WWN8 1544 aa14.13□□□□□ -0.15
GABRE-211ENST00000491339 PLEKHD1A6NEE1 506 aa14.13□□□□□ -0.15
GABRE-211ENST00000491339 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
GABRE-211ENST00000491339 PHLDB1Q86UU1 1377 aa14.13□□□□□ -0.15
GABRE-211ENST00000491339 POTEHQ6S545 545 aa14.13□□□□□ -0.15
GABRE-211ENST00000491339 LRRIQ1Q96JM4 1722 aa14.12□□□□□ -0.15
GABRE-211ENST00000491339 KIF14Q15058 1648 aa14.12□□□□□ -0.15
GABRE-211ENST00000491339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.12□□□□□ -0.15
GABRE-211ENST00000491339 MYO5CQ9NQX4 1742 aa14.12□□□□□ -0.15
GABRE-211ENST00000491339 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
GABRE-211ENST00000491339 ATP1B4Q9UN42 357 aaPredicted RBP14.1□□□□□ -0.15
GABRE-211ENST00000491339 CLIP1P30622 1438 aa14.08□□□□□ -0.16
GABRE-211ENST00000491339 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
GABRE-211ENST00000491339 ADGRL1O94910 1474 aa14.08□□□□□ -0.16
GABRE-211ENST00000491339 FYCO1Q9BQS8 1478 aa14.08□□□□□ -0.16
GABRE-211ENST00000491339 CASKIN1Q8WXD9 1431 aa14.07□□□□□ -0.16
GABRE-211ENST00000491339 FANCAO15360 1455 aa14.06□□□□□ -0.16
GABRE-211ENST00000491339 FRMPD1Q5SYB0 1578 aa14.06□□□□□ -0.16
GABRE-211ENST00000491339 RICTORQ6R327 1708 aa14.06□□□□□ -0.16
GABRE-211ENST00000491339 TROQ12816 1431 aaPredicted RBP14.04□□□□□ -0.16
GABRE-211ENST00000491339 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.16
GABRE-211ENST00000491339 DENND4BO75064 1496 aaPredicted RBP14.02□□□□□ -0.16
GABRE-211ENST00000491339 AKNAQ7Z591 1439 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms