RNA–Protein interactions for RNA: ENST00000491073.5

PDPK1-212, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best)

Gene PDPK1, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-212ENST00000491073 PELP1Q8IZL8 1130 aaKnown RBP25.97■■□□□ 1.75
PDPK1-212ENST00000491073 CTTNBP2Q8WZ74 1663 aa25.97■■□□□ 1.75
PDPK1-212ENST00000491073 FHOD3Q2V2M9 1422 aa25.95■■□□□ 1.75
PDPK1-212ENST00000491073 WDR62O43379 1518 aa25.93■■□□□ 1.74
PDPK1-212ENST00000491073 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
PDPK1-212ENST00000491073 PBRM1Q86U86 1689 aa25.91■■□□□ 1.74
PDPK1-212ENST00000491073 PCF11O94913 1555 aaKnown RBP25.88■■□□□ 1.73
PDPK1-212ENST00000491073 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
PDPK1-212ENST00000491073 EFCAB5A4FU69 1503 aa25.83■■□□□ 1.72
PDPK1-212ENST00000491073 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
PDPK1-212ENST00000491073 IFT140Q96RY7 1462 aa25.81■■□□□ 1.72
PDPK1-212ENST00000491073 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
PDPK1-212ENST00000491073 ADAMTS12P58397 1594 aa25.8■■□□□ 1.72
PDPK1-212ENST00000491073 FHAD1B1AJZ9 1412 aa25.78■■□□□ 1.72
PDPK1-212ENST00000491073 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
PDPK1-212ENST00000491073 RRBP1Q9P2E9 1410 aaKnown RBP25.78■■□□□ 1.72
PDPK1-212ENST00000491073 SAMD9Q5K651 1589 aa25.77■■□□□ 1.72
PDPK1-212ENST00000491073 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
PDPK1-212ENST00000491073 LRRC9Q6ZRR7 1453 aa25.76■■□□□ 1.71
PDPK1-212ENST00000491073 ATP1B4Q9UN42 357 aaPredicted RBP25.75■■□□□ 1.71
PDPK1-212ENST00000491073 CFAP43Q8NDM7 1665 aa25.72■■□□□ 1.71
PDPK1-212ENST00000491073 CASKIN1Q8WXD9 1431 aa25.72■■□□□ 1.71
PDPK1-212ENST00000491073 SNAPC4Q5SXM2 1469 aa25.71■■□□□ 1.71
PDPK1-212ENST00000491073 FYCO1Q9BQS8 1478 aa25.69■■□□□ 1.7
PDPK1-212ENST00000491073 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
PDPK1-212ENST00000491073 PHLDB1Q86UU1 1377 aa25.68■■□□□ 1.7
PDPK1-212ENST00000491073 CCNB3Q8WWL7 1395 aa25.67■■□□□ 1.7
PDPK1-212ENST00000491073 LRRIQ1Q96JM4 1722 aa25.66■■□□□ 1.7
PDPK1-212ENST00000491073 FMN1Q68DA7 1419 aa25.63■■□□□ 1.69
PDPK1-212ENST00000491073 IQGAP2Q13576 1575 aa25.61■■□□□ 1.69
PDPK1-212ENST00000491073 ITGAEP38570 1179 aa25.58■■□□□ 1.68
PDPK1-212ENST00000491073 GRIN2AQ12879 1464 aa25.52■■□□□ 1.68
PDPK1-212ENST00000491073 UGGT2Q9NYU1 1516 aa25.48■■□□□ 1.67
PDPK1-212ENST00000491073 DHX57Q6P158 1386 aaKnown RBP25.47■■□□□ 1.67
PDPK1-212ENST00000491073 KIAA0586Q9BVV6 1533 aa25.46■■□□□ 1.67
PDPK1-212ENST00000491073 MAGI3Q5TCQ9 1506 aa25.45■■□□□ 1.67
PDPK1-212ENST00000491073 DISP1Q96F81 1524 aa25.44■■□□□ 1.66
PDPK1-212ENST00000491073 MAGI1Q96QZ7 1491 aaPredicted RBP25.44■■□□□ 1.66
PDPK1-212ENST00000491073 FAM50AQ14320 339 aaKnown RBP25.43■■□□□ 1.66
PDPK1-212ENST00000491073 CEP170Q5SW79 1584 aa25.42■■□□□ 1.66
PDPK1-212ENST00000491073 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
PDPK1-212ENST00000491073 MTUS2Q5JR59 1369 aa25.4■■□□□ 1.66
PDPK1-212ENST00000491073 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
PDPK1-212ENST00000491073 FBLN2P98095 1184 aa25.39■■□□□ 1.65
PDPK1-212ENST00000491073 ARID3CA6NKF2 412 aa25.38■■□□□ 1.65
PDPK1-212ENST00000491073 KIAA0556O60303 1618 aa25.37■■□□□ 1.65
PDPK1-212ENST00000491073 CDK13Q14004 1512 aaKnown RBP25.35■■□□□ 1.65
PDPK1-212ENST00000491073 NCOA2Q15596 1464 aa25.35■■□□□ 1.65
PDPK1-212ENST00000491073 RAB3GAP2Q9H2M9 1393 aa25.34■■□□□ 1.65
PDPK1-212ENST00000491073 FGD6Q6ZV73 1430 aa25.34■■□□□ 1.65
PDPK1-212ENST00000491073 EPRSP07814 1512 aaKnown RBP25.33■■□□□ 1.65
PDPK1-212ENST00000491073 HECW1Q76N89 1606 aa25.31■■□□□ 1.64
PDPK1-212ENST00000491073 NUP160Q12769 1436 aa25.29■■□□□ 1.64
PDPK1-212ENST00000491073 EHBP1L1Q8N3D4 1523 aa25.28■■□□□ 1.64
PDPK1-212ENST00000491073 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
PDPK1-212ENST00000491073 PTPRKQ15262 1439 aa25.27■■□□□ 1.64
PDPK1-212ENST00000491073 CCDC18Q5T9S5 1454 aa25.27■■□□□ 1.64
PDPK1-212ENST00000491073 SETD5Q9C0A6 1442 aa25.26■■□□□ 1.63
PDPK1-212ENST00000491073 SUPT6HQ7KZ85 1726 aaKnown RBP25.26■■□□□ 1.63
PDPK1-212ENST00000491073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.24■■□□□ 1.63
PDPK1-212ENST00000491073 MYOM3Q5VTT5 1437 aa25.24■■□□□ 1.63
PDPK1-212ENST00000491073 NUP153P49790 1475 aaKnown RBP25.23■■□□□ 1.63
PDPK1-212ENST00000491073 JPH4Q96JJ6 628 aa25.2■■□□□ 1.63
PDPK1-212ENST00000491073 CLSPNQ9HAW4 1339 aa25.2■■□□□ 1.62
PDPK1-212ENST00000491073 MAPKBP1O60336 1514 aa25.19■■□□□ 1.62
PDPK1-212ENST00000491073 RAPGEF6Q8TEU7 1601 aa25.17■■□□□ 1.62
PDPK1-212ENST00000491073 PLB1Q6P1J6 1458 aa25.17■■□□□ 1.62
PDPK1-212ENST00000491073 PTPN23Q9H3S7 1636 aa25.14■■□□□ 1.61
PDPK1-212ENST00000491073 ZNF316A6NFI3 1004 aaPredicted RBP25.13■■□□□ 1.61
PDPK1-212ENST00000491073 MYT1Q01538 1121 aa25.11■■□□□ 1.61
PDPK1-212ENST00000491073 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.61
PDPK1-212ENST00000491073 CHD1O14646 1710 aa25.07■■□□□ 1.6
PDPK1-212ENST00000491073 TCOF1Q13428 1488 aaKnown RBP25.06■■□□□ 1.6
PDPK1-212ENST00000491073 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
PDPK1-212ENST00000491073 CARMIL2Q6F5E8 1435 aa25.03■■□□□ 1.6
PDPK1-212ENST00000491073 HFM1A2PYH4 1435 aa25.02■■□□□ 1.6
PDPK1-212ENST00000491073 NAIPQ13075 1403 aa25.02■■□□□ 1.6
PDPK1-212ENST00000491073 SIN3AQ96ST3 1273 aa25.01■■□□□ 1.59
PDPK1-212ENST00000491073 CHIC2Q9UKJ5 165 aa24.99■■□□□ 1.59
PDPK1-212ENST00000491073 ZNF644Q9H582 1327 aaPredicted RBP24.99■■□□□ 1.59
PDPK1-212ENST00000491073 ABCA8O94911 1581 aa24.97■■□□□ 1.59
PDPK1-212ENST00000491073 MIA2Q96PC5 1412 aa24.96■■□□□ 1.59
PDPK1-212ENST00000491073 RRP7BPQ9NSQ0 103 aa24.95■■□□□ 1.59
PDPK1-212ENST00000491073 SCAF1Q9H7N4 1312 aaKnown RBP24.95■■□□□ 1.58
PDPK1-212ENST00000491073 KIF14Q15058 1648 aa24.94■■□□□ 1.58
PDPK1-212ENST00000491073 TROQ12816 1431 aaPredicted RBP24.93■■□□□ 1.58
PDPK1-212ENST00000491073 KDM6BO15054 1643 aa24.92■■□□□ 1.58
PDPK1-212ENST00000491073 ATP10BO94823 1461 aa24.91■■□□□ 1.58
PDPK1-212ENST00000491073 ERCC6L2Q5T890 1561 aa24.9■■□□□ 1.58
PDPK1-212ENST00000491073 NEUROD1Q13562 356 aa24.89■■□□□ 1.58
PDPK1-212ENST00000491073 CDK11AQ9UQ88 783 aaPredicted RBP24.88■■□□□ 1.57
PDPK1-212ENST00000491073 SHROOM2Q13796 1616 aa24.85■■□□□ 1.57
PDPK1-212ENST00000491073 PTPRGP23470 1445 aa24.85■■□□□ 1.57
PDPK1-212ENST00000491073 UACAQ9BZF9 1416 aa24.85■■□□□ 1.57
PDPK1-212ENST00000491073 GPATCH8Q9UKJ3 1502 aaKnown RBP24.84■■□□□ 1.57
PDPK1-212ENST00000491073 ABCC5O15440 1437 aa24.84■■□□□ 1.57
PDPK1-212ENST00000491073 ADCY10Q96PN6 1610 aa24.83■■□□□ 1.57
PDPK1-212ENST00000491073 DAPK1P53355 1430 aa24.82■■□□□ 1.56
PDPK1-212ENST00000491073 GCC2Q8IWJ2 1684 aa24.82■■□□□ 1.56
PDPK1-212ENST00000491073 DENND4BO75064 1496 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms