RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 KANK4Q5T7N3 995 aaPredicted RBP24.32■■□□□ 1.48
SNX5-214ENST00000490175 TIAM1Q13009 1591 aa24.3■■□□□ 1.48
SNX5-214ENST00000490175 WDR62O43379 1518 aa24.28■■□□□ 1.48
SNX5-214ENST00000490175 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
SNX5-214ENST00000490175 RRBP1Q9P2E9 1410 aaKnown RBP24.26■■□□□ 1.47
SNX5-214ENST00000490175 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
SNX5-214ENST00000490175 AQRO60306 1485 aaKnown RBP eCLIP24.24■■□□□ 1.471e-7■■■■□ 21.1
SNX5-214ENST00000490175 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
SNX5-214ENST00000490175 CFAP43Q8NDM7 1665 aa24.22■■□□□ 1.47
SNX5-214ENST00000490175 PCF11O94913 1555 aaKnown RBP24.22■■□□□ 1.47
SNX5-214ENST00000490175 FYCO1Q9BQS8 1478 aa24.21■■□□□ 1.47
SNX5-214ENST00000490175 FHOD3Q2V2M9 1422 aa24.2■■□□□ 1.46
SNX5-214ENST00000490175 SAMD9Q5K651 1589 aa24.2■■□□□ 1.46
SNX5-214ENST00000490175 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
SNX5-214ENST00000490175 LRRC9Q6ZRR7 1453 aa24.18■■□□□ 1.46
SNX5-214ENST00000490175 FMN1Q68DA7 1419 aa24.17■■□□□ 1.46
SNX5-214ENST00000490175 GRIN2BQ13224 1484 aa24.17■■□□□ 1.46
SNX5-214ENST00000490175 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
SNX5-214ENST00000490175 P3H3Q8IVL6 736 aa24.13■■□□□ 1.45
SNX5-214ENST00000490175 CCNB3Q8WWL7 1395 aa24.12■■□□□ 1.45
SNX5-214ENST00000490175 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
SNX5-214ENST00000490175 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
SNX5-214ENST00000490175 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
SNX5-214ENST00000490175 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
SNX5-214ENST00000490175 IQGAP2Q13576 1575 aa24.03■■□□□ 1.44
SNX5-214ENST00000490175 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
SNX5-214ENST00000490175 ATP1B4Q9UN42 357 aaPredicted RBP23.98■■□□□ 1.43
SNX5-214ENST00000490175 CLSPNQ9HAW4 1339 aa23.97■■□□□ 1.43
SNX5-214ENST00000490175 PHLDB1Q86UU1 1377 aa23.97■■□□□ 1.43
SNX5-214ENST00000490175 UGGT2Q9NYU1 1516 aa23.93■■□□□ 1.42
SNX5-214ENST00000490175 LRRIQ1Q96JM4 1722 aa23.91■■□□□ 1.42
SNX5-214ENST00000490175 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
SNX5-214ENST00000490175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.9■■□□□ 1.42
SNX5-214ENST00000490175 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.42
SNX5-214ENST00000490175 GRIN2AQ12879 1464 aa23.88■■□□□ 1.41
SNX5-214ENST00000490175 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
SNX5-214ENST00000490175 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
SNX5-214ENST00000490175 HECW1Q76N89 1606 aa23.86■■□□□ 1.41
SNX5-214ENST00000490175 MTUS2Q5JR59 1369 aa23.85■■□□□ 1.41
SNX5-214ENST00000490175 EHBP1L1Q8N3D4 1523 aa23.83■■□□□ 1.41
SNX5-214ENST00000490175 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
SNX5-214ENST00000490175 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
SNX5-214ENST00000490175 ITGAEP38570 1179 aa23.78■■□□□ 1.4
SNX5-214ENST00000490175 FGD6Q6ZV73 1430 aa23.78■■□□□ 1.4
SNX5-214ENST00000490175 KIAA0556O60303 1618 aa23.78■■□□□ 1.4
SNX5-214ENST00000490175 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
SNX5-214ENST00000490175 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
SNX5-214ENST00000490175 NCOA2Q15596 1464 aa23.75■■□□□ 1.39
SNX5-214ENST00000490175 DISP1Q96F81 1524 aa23.75■■□□□ 1.39
SNX5-214ENST00000490175 RAB3GAP2Q9H2M9 1393 aa23.74■■□□□ 1.39
SNX5-214ENST00000490175 EPRSP07814 1512 aaKnown RBP23.74■■□□□ 1.39
SNX5-214ENST00000490175 ARHGEF11O15085 1522 aa23.73■■□□□ 1.39
SNX5-214ENST00000490175 MYOM3Q5VTT5 1437 aa23.72■■□□□ 1.39
SNX5-214ENST00000490175 CHMP7Q8WUX9 453 aaPredicted RBP23.71■■□□□ 1.39
SNX5-214ENST00000490175 CEP170Q5SW79 1584 aa23.71■■□□□ 1.39
SNX5-214ENST00000490175 MAGI3Q5TCQ9 1506 aa23.69■■□□□ 1.38
SNX5-214ENST00000490175 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
SNX5-214ENST00000490175 NUP160Q12769 1436 aa23.68■■□□□ 1.38
SNX5-214ENST00000490175 RAPGEF6Q8TEU7 1601 aa23.62■■□□□ 1.37
SNX5-214ENST00000490175 DIEXFQ68CQ4 756 aaKnown RBP23.62■■□□□ 1.37
SNX5-214ENST00000490175 CDK13Q14004 1512 aaKnown RBP23.61■■□□□ 1.37
SNX5-214ENST00000490175 PTPN23Q9H3S7 1636 aa23.6■■□□□ 1.37
SNX5-214ENST00000490175 TCOF1Q13428 1488 aaKnown RBP23.58■■□□□ 1.37
SNX5-214ENST00000490175 MAPKBP1O60336 1514 aa23.58■■□□□ 1.37
SNX5-214ENST00000490175 CARMIL2Q6F5E8 1435 aa23.58■■□□□ 1.36
SNX5-214ENST00000490175 NUP153P49790 1475 aaKnown RBP23.57■■□□□ 1.36
SNX5-214ENST00000490175 FBLN2P98095 1184 aa23.56■■□□□ 1.36
SNX5-214ENST00000490175 MIA2Q96PC5 1412 aa23.55■■□□□ 1.36
SNX5-214ENST00000490175 HFM1A2PYH4 1435 aa23.54■■□□□ 1.36
SNX5-214ENST00000490175 JPH4Q96JJ6 628 aa23.52■■□□□ 1.36
SNX5-214ENST00000490175 PTPRKQ15262 1439 aa23.51■■□□□ 1.35
SNX5-214ENST00000490175 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
SNX5-214ENST00000490175 NAIPQ13075 1403 aa23.44■■□□□ 1.34
SNX5-214ENST00000490175 AKNAQ7Z591 1439 aa23.44■■□□□ 1.34
SNX5-214ENST00000490175 PLB1Q6P1J6 1458 aa23.42■■□□□ 1.34
SNX5-214ENST00000490175 TROQ12816 1431 aaPredicted RBP23.41■■□□□ 1.34
SNX5-214ENST00000490175 UACAQ9BZF9 1416 aa23.41■■□□□ 1.34
SNX5-214ENST00000490175 ARID3CA6NKF2 412 aa23.4■■□□□ 1.34
SNX5-214ENST00000490175 GCC2Q8IWJ2 1684 aa23.4■■□□□ 1.34
SNX5-214ENST00000490175 TIMELESSQ9UNS1 1208 aa23.4■■□□□ 1.34
SNX5-214ENST00000490175 ABCA8O94911 1581 aa23.39■■□□□ 1.33
SNX5-214ENST00000490175 ADCY10Q96PN6 1610 aa23.39■■□□□ 1.33
SNX5-214ENST00000490175 CHD1O14646 1710 aa23.38■■□□□ 1.33
SNX5-214ENST00000490175 ITSN2Q9NZM3 1697 aa23.34■■□□□ 1.33
SNX5-214ENST00000490175 DNMT1P26358 1616 aaKnown RBP23.32■■□□□ 1.32
SNX5-214ENST00000490175 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
SNX5-214ENST00000490175 SCAF1Q9H7N4 1312 aaKnown RBP23.31■■□□□ 1.32
SNX5-214ENST00000490175 ACIN1Q9UKV3 1341 aaKnown RBP23.3■■□□□ 1.32
SNX5-214ENST00000490175 ROCK1Q13464 1354 aa23.29■■□□□ 1.32
SNX5-214ENST00000490175 SHROOM2Q13796 1616 aa23.29■■□□□ 1.32
SNX5-214ENST00000490175 PELP1Q8IZL8 1130 aaKnown RBP23.28■■□□□ 1.32
SNX5-214ENST00000490175 DAPK1P53355 1430 aa23.28■■□□□ 1.32
SNX5-214ENST00000490175 SIN3AQ96ST3 1273 aa23.26■■□□□ 1.31
SNX5-214ENST00000490175 KIF14Q15058 1648 aa23.25■■□□□ 1.31
SNX5-214ENST00000490175 ATP10BO94823 1461 aa23.25■■□□□ 1.31
SNX5-214ENST00000490175 PTPRGP23470 1445 aa23.24■■□□□ 1.31
SNX5-214ENST00000490175 GPATCH8Q9UKJ3 1502 aaKnown RBP23.24■■□□□ 1.31
SNX5-214ENST00000490175 RRP7BPQ9NSQ0 103 aa23.24■■□□□ 1.31
SNX5-214ENST00000490175 ABCC5O15440 1437 aa23.24■■□□□ 1.31
SNX5-214ENST00000490175 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms