RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 NISCHQ9Y2I1 1504 aa35.1■■■■□ 3.21
SNX5-214ENST00000490175 CCDC180Q9P1Z9 1646 aa30.37■■■□□ 2.45
SNX5-214ENST00000490175 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
SNX5-214ENST00000490175 DCAF1Q9Y4B6 1507 aa29.05■■■□□ 2.24
SNX5-214ENST00000490175 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
SNX5-214ENST00000490175 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
SNX5-214ENST00000490175 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
SNX5-214ENST00000490175 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
SNX5-214ENST00000490175 ABCC9O60706 1549 aa28.17■■■□□ 2.1
SNX5-214ENST00000490175 NACADO15069 1562 aa28.15■■■□□ 2.1
SNX5-214ENST00000490175 SCRIBQ14160 1630 aa27.98■■■□□ 2.07
SNX5-214ENST00000490175 RB1CC1Q8TDY2 1594 aa27.76■■■□□ 2.04
SNX5-214ENST00000490175 RSF1Q96T23 1441 aaPredicted RBP27.45■■□□□ 1.98
SNX5-214ENST00000490175 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
SNX5-214ENST00000490175 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
SNX5-214ENST00000490175 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
SNX5-214ENST00000490175 MROH2BQ7Z745 1585 aa27.13■■□□□ 1.93
SNX5-214ENST00000490175 BAZ1AQ9NRL2 1556 aaPredicted RBP27.07■■□□□ 1.92
SNX5-214ENST00000490175 WIZO95785 1651 aa26.95■■□□□ 1.9
SNX5-214ENST00000490175 BICRAQ9NZM4 1560 aa26.91■■□□□ 1.9
SNX5-214ENST00000490175 SMARCA4P51532 1647 aa26.87■■□□□ 1.89
SNX5-214ENST00000490175 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
SNX5-214ENST00000490175 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
SNX5-214ENST00000490175 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
SNX5-214ENST00000490175 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
SNX5-214ENST00000490175 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
SNX5-214ENST00000490175 SMARCA2P51531 1590 aa26.46■■□□□ 1.83
SNX5-214ENST00000490175 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
SNX5-214ENST00000490175 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
SNX5-214ENST00000490175 LOC105371045A0A1W2PR82 267 aa26.26■■□□□ 1.79
SNX5-214ENST00000490175 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
SNX5-214ENST00000490175 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
SNX5-214ENST00000490175 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
SNX5-214ENST00000490175 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
SNX5-214ENST00000490175 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
SNX5-214ENST00000490175 WRNQ14191 1432 aaPredicted RBP eCLIP25.82■■□□□ 1.726e-6■■■□□ 16.7
SNX5-214ENST00000490175 EEA1Q15075 1411 aa25.78■■□□□ 1.72
SNX5-214ENST00000490175 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
SNX5-214ENST00000490175 SOGA1O94964 1423 aa25.67■■□□□ 1.7
SNX5-214ENST00000490175 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
SNX5-214ENST00000490175 EHMT2Q96KQ7 1210 aa25.58■■□□□ 1.68
SNX5-214ENST00000490175 TOP2BQ02880 1626 aa25.56■■□□□ 1.68
SNX5-214ENST00000490175 TRIM26Q12899 539 aaPredicted RBP25.56■■□□□ 1.68
SNX5-214ENST00000490175 CSRNP3Q8WYN3 585 aa25.55■■□□□ 1.68
SNX5-214ENST00000490175 CFTRP13569 1480 aa25.55■■□□□ 1.68
SNX5-214ENST00000490175 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
SNX5-214ENST00000490175 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
SNX5-214ENST00000490175 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
SNX5-214ENST00000490175 PRDM2Q13029 1718 aa25.48■■□□□ 1.67
SNX5-214ENST00000490175 TNIKQ9UKE5 1360 aa25.46■■□□□ 1.67
SNX5-214ENST00000490175 GOLGA3Q08378 1498 aa25.43■■□□□ 1.66
SNX5-214ENST00000490175 HRCP23327 699 aa25.41■■□□□ 1.66
SNX5-214ENST00000490175 KIF21BO75037 1637 aa25.4■■□□□ 1.66
SNX5-214ENST00000490175 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
SNX5-214ENST00000490175 CEP162Q5TB80 1403 aa25.35■■□□□ 1.65
SNX5-214ENST00000490175 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
SNX5-214ENST00000490175 CUX1P39880 1505 aa25.34■■□□□ 1.65
SNX5-214ENST00000490175 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
SNX5-214ENST00000490175 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
SNX5-214ENST00000490175 KIF27Q86VH2 1401 aa25.13■■□□□ 1.61
SNX5-214ENST00000490175 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
SNX5-214ENST00000490175 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
SNX5-214ENST00000490175 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
SNX5-214ENST00000490175 CLIP1P30622 1438 aa25.04■■□□□ 1.6
SNX5-214ENST00000490175 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
SNX5-214ENST00000490175 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
SNX5-214ENST00000490175 PPARGC1BQ86YN6 1023 aaKnown RBP24.95■■□□□ 1.58
SNX5-214ENST00000490175 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.58
SNX5-214ENST00000490175 CUX2O14529 1486 aa24.92■■□□□ 1.58
SNX5-214ENST00000490175 NESP48681 1621 aa24.91■■□□□ 1.58
SNX5-214ENST00000490175 VPS8Q8N3P4 1428 aa24.9■■□□□ 1.58
SNX5-214ENST00000490175 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
SNX5-214ENST00000490175 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
SNX5-214ENST00000490175 IGF1RP08069 1367 aa24.83■■□□□ 1.57
SNX5-214ENST00000490175 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
SNX5-214ENST00000490175 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
SNX5-214ENST00000490175 POLA1P09884 1462 aaPredicted RBP24.77■■□□□ 1.56
SNX5-214ENST00000490175 CARMIL1Q5VZK9 1371 aa24.72■■□□□ 1.55
SNX5-214ENST00000490175 URB2Q14146 1524 aaKnown RBP24.71■■□□□ 1.55
SNX5-214ENST00000490175 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
SNX5-214ENST00000490175 RAD54L2Q9Y4B4 1467 aa24.68■■□□□ 1.54
SNX5-214ENST00000490175 APLP2Q06481 763 aa24.68■■□□□ 1.54
SNX5-214ENST00000490175 DNAJC5BQ9UF47 199 aa24.66■■□□□ 1.54
SNX5-214ENST00000490175 WDR97A6NE52 1622 aa24.65■■□□□ 1.54
SNX5-214ENST00000490175 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
SNX5-214ENST00000490175 TTBK1Q5TCY1 1321 aaPredicted RBP24.64■■□□□ 1.54
SNX5-214ENST00000490175 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
SNX5-214ENST00000490175 CUL7Q14999 1698 aa24.62■■□□□ 1.53
SNX5-214ENST00000490175 ARHGAP35Q9NRY4 1499 aa24.61■■□□□ 1.53
SNX5-214ENST00000490175 ABCA5Q8WWZ7 1642 aa24.53■■□□□ 1.52
SNX5-214ENST00000490175 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
SNX5-214ENST00000490175 GAPVD1Q14C86 1478 aa24.44■■□□□ 1.5
SNX5-214ENST00000490175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.44■■□□□ 1.5
SNX5-214ENST00000490175 CCER1Q8TC90 406 aaPredicted RBP24.44■■□□□ 1.5
SNX5-214ENST00000490175 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
SNX5-214ENST00000490175 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
SNX5-214ENST00000490175 EFCAB5A4FU69 1503 aa24.39■■□□□ 1.5
SNX5-214ENST00000490175 MAP3K1Q13233 1512 aa24.39■■□□□ 1.5
SNX5-214ENST00000490175 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.5
SNX5-214ENST00000490175 FHAD1B1AJZ9 1412 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms